FFCP PHASE1:Mm9::chr8:86424519..86424544,+: Difference between revisions
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{{FFCP|EntrezGene=330814|HGNC=|UniProt=D6RI60|association_with_transcript=47bp_to_ENSMUST00000124355_5end|description=CAGE_peak_5_at_Lphn1_5end|id=chr8:86424519..86424544,+|ontology_enrichment_celltype=CL:0000540!1.51e-14!33;CL:0000047!1.51e-14!33;CL:0000031!1.51e-14!33;CL:0000404!1.51e-14!33;CL:0000117!1.58e-14!23;CL:0000337!1.58e-14!23;CL:0000221!6.37e-13!44;CL:0000133!6.37e-13!44;CL:0002319!7.07e-13!43;CL:0000393!7.64e-10!39;CL:0000211!7.64e-10!39;CL:0000055!1.19e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-23,23;CL:0000337,5.98e-23,23;CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0002319,2.22e-16,43;CL:0000221,7.77e-16,44;CL:0000133,7.77e-16,44;CL:0000393,6.95e-14,39;CL:0000211,6.95e-14,39;CL:0002321,2.41e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.11e-21!73;UBERON:0005743!1.11e-21!73;UBERON:0000073!2.20e-21!75;UBERON:0001016!2.20e-21!75;UBERON:0004121!7.53e-17!102;UBERON:0000924!7.53e-17!102;UBERON:0006601!7.53e-17!102;UBERON:0001049!7.58e-16!52;UBERON:0005068!7.58e-16!52;UBERON:0006241!7.58e-16!52;UBERON:0007135!7.58e-16!52;UBERON:0002020!1.51e-15!34;UBERON:0002346!3.35e-15!71;UBERON:0003075!3.35e-15!71;UBERON:0007284!3.35e-15!71;UBERON:0000955!4.90e-15!50;UBERON:0006238!4.90e-15!50;UBERON:0002616!1.49e-14!49;UBERON:0003080!3.46e-13!40;UBERON:0002780!4.80e-13!39;UBERON:0001890!4.80e-13!39;UBERON:0006240!4.80e-13!39;UBERON:0000033!5.38e-13!63;UBERON:0003056!2.65e-12!49;UBERON:0002791!4.48e-12!29;UBERON:0003528!4.48e-12!29;UBERON:0001893!4.48e-12!29;UBERON:0000153!1.38e-08!94;UBERON:0000956!3.19e-08!21;UBERON:0001869!3.19e-08!21;UBERON:0000203!3.19e-08!21;UBERON:0007811!3.56e-08!86;UBERON:0000991!3.49e-07!18;UBERON:0005564!3.49e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-26,73;UBERON:0001016,2.75e-25,75;UBERON:0000073,9.51e-24,54;UBERON:0002020,2.25e-22,34;UBERON:0001049,1.04e-19,52;UBERON:0005068,1.04e-19,52;UBERON:0006241,1.04e-19,52;UBERON:0007135,1.04e-19,52;UBERON:0004121,1.84e-18,95;UBERON:0000924,1.84e-18,95;UBERON:0006601,1.84e-18,95;UBERON:0002780,1.17e-16,39;UBERON:0001890,1.17e-16,39;UBERON:0006240,1.17e-16,39;UBERON:0003080,4.61e-16,40;UBERON:0003528,8.28e-16,29;UBERON:0002791,8.28e-16,29;UBERON:0001893,8.28e-16,29;UBERON:0002346,2.19e-15,64;UBERON:0003075,2.19e-15,64;UBERON:0007284,2.19e-15,64;UBERON:0000955,2.31e-15,47;UBERON:0006238,2.31e-15,47;UBERON:0002616,1.53e-14,46;UBERON:0003056,6.88e-13,49;UBERON:0010371,2.21e-12,73;UBERON:0000956,5.71e-11,21;UBERON:0001869,5.71e-11,21;UBERON:0000203,5.71e-11,21;UBERON:0000991,2.50e-10,18;UBERON:0005564,2.50e-10,18;UBERON:0000473,6.84e-10,14;UBERON:0004176,2.11e-09,17;UBERON:0009196,2.11e-09,17;UBERON:0009117,2.11e-09,17;UBERON:0003135,4.64e-09,15;UBERON:0001948,8.41e-09,5;UBERON:0002315,8.41e-09,5;UBERON:0010314,9.40e-09,92;UBERON:0003101,2.46e-08,16;UBERON:0000079,2.46e-08,16;UBERON:0002240,3.31e-07,6;UBERON:0005174,3.31e-07,6;UBERON:0001137,3.31e-07,6;UBERON:0002619,3.57e-07,17;UBERON:0003133,5.79e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,3.80298842103708,0.338844532069132,0,0,0,0,2.09720077362883,1.53687322128622,3.94020526772215,2.16009501330705,1.05162480675691,4.57041575046086,3.3130281142742,0.857435594504678,0.958454710182364,4.5960939330501,3.30347642998166,2.42605942361857,1.84327839907492,2.1101806036831,0.731901148819277,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,3.83017161115768,3.41692033917847,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,7.16229807043327,1.39059456153821,2.04572365864264,0,1.62241263067758,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.748401490664606,0.896796041993948,1.12442069471675,0.258703370739016,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0,0,0.61734640922383,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0,1.89260953707715,3.91037527041281,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.758671603812327,0.799739588268102,0,0.203651327845314,0,0.350679099451593,0.189709611372772,0,0,0,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330814 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D6RI60 | |||
|association_with_transcript=47bp_to_ENSMUST00000124355_5end | |||
|cluster_id=chr8:86424519..86424544,+ | |||
|description=CAGE_peak_5_at_Lphn1_5end | |||
|id=chr8:86424519..86424544,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-14!33;CL:0000047!1.51e-14!33;CL:0000031!1.51e-14!33;CL:0000404!1.51e-14!33;CL:0000117!1.58e-14!23;CL:0000337!1.58e-14!23;CL:0000221!6.37e-13!44;CL:0000133!6.37e-13!44;CL:0002319!7.07e-13!43;CL:0000393!7.64e-10!39;CL:0000211!7.64e-10!39;CL:0000055!1.19e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-23,23;CL:0000337,5.98e-23,23;CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0002319,2.22e-16,43;CL:0000221,7.77e-16,44;CL:0000133,7.77e-16,44;CL:0000393,6.95e-14,39;CL:0000211,6.95e-14,39;CL:0002321,2.41e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-21!73;UBERON:0005743!1.11e-21!73;UBERON:0000073!2.20e-21!75;UBERON:0001016!2.20e-21!75;UBERON:0004121!7.53e-17!102;UBERON:0000924!7.53e-17!102;UBERON:0006601!7.53e-17!102;UBERON:0001049!7.58e-16!52;UBERON:0005068!7.58e-16!52;UBERON:0006241!7.58e-16!52;UBERON:0007135!7.58e-16!52;UBERON:0002020!1.51e-15!34;UBERON:0002346!3.35e-15!71;UBERON:0003075!3.35e-15!71;UBERON:0007284!3.35e-15!71;UBERON:0000955!4.90e-15!50;UBERON:0006238!4.90e-15!50;UBERON:0002616!1.49e-14!49;UBERON:0003080!3.46e-13!40;UBERON:0002780!4.80e-13!39;UBERON:0001890!4.80e-13!39;UBERON:0006240!4.80e-13!39;UBERON:0000033!5.38e-13!63;UBERON:0003056!2.65e-12!49;UBERON:0002791!4.48e-12!29;UBERON:0003528!4.48e-12!29;UBERON:0001893!4.48e-12!29;UBERON:0000153!1.38e-08!94;UBERON:0000956!3.19e-08!21;UBERON:0001869!3.19e-08!21;UBERON:0000203!3.19e-08!21;UBERON:0007811!3.56e-08!86;UBERON:0000991!3.49e-07!18;UBERON:0005564!3.49e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-26,73;UBERON:0001016,2.75e-25,75;UBERON:0000073,9.51e-24,54;UBERON:0002020,2.25e-22,34;UBERON:0001049,1.04e-19,52;UBERON:0005068,1.04e-19,52;UBERON:0006241,1.04e-19,52;UBERON:0007135,1.04e-19,52;UBERON:0004121,1.84e-18,95;UBERON:0000924,1.84e-18,95;UBERON:0006601,1.84e-18,95;UBERON:0002780,1.17e-16,39;UBERON:0001890,1.17e-16,39;UBERON:0006240,1.17e-16,39;UBERON:0003080,4.61e-16,40;UBERON:0003528,8.28e-16,29;UBERON:0002791,8.28e-16,29;UBERON:0001893,8.28e-16,29;UBERON:0002346,2.19e-15,64;UBERON:0003075,2.19e-15,64;UBERON:0007284,2.19e-15,64;UBERON:0000955,2.31e-15,47;UBERON:0006238,2.31e-15,47;UBERON:0002616,1.53e-14,46;UBERON:0003056,6.88e-13,49;UBERON:0010371,2.21e-12,73;UBERON:0000956,5.71e-11,21;UBERON:0001869,5.71e-11,21;UBERON:0000203,5.71e-11,21;UBERON:0000991,2.50e-10,18;UBERON:0005564,2.50e-10,18;UBERON:0000473,6.84e-10,14;UBERON:0004176,2.11e-09,17;UBERON:0009196,2.11e-09,17;UBERON:0009117,2.11e-09,17;UBERON:0003135,4.64e-09,15;UBERON:0001948,8.41e-09,5;UBERON:0002315,8.41e-09,5;UBERON:0010314,9.40e-09,92;UBERON:0003101,2.46e-08,16;UBERON:0000079,2.46e-08,16;UBERON:0002240,3.31e-07,6;UBERON:0005174,3.31e-07,6;UBERON:0001137,3.31e-07,6;UBERON:0002619,3.57e-07,17;UBERON:0003133,5.79e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,3.80298842103708,0.338844532069132,0,0,0,0,2.09720077362883,1.53687322128622,3.94020526772215,2.16009501330705,1.05162480675691,4.57041575046086,3.3130281142742,0.857435594504678,0.958454710182364,4.5960939330501,3.30347642998166,2.42605942361857,1.84327839907492,2.1101806036831,0.731901148819277,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,3.83017161115768,3.41692033917847,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.693941307064543,0.608930956624282,0.461230994512117,0.301445281105245,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,7.16229807043327,1.39059456153821,2.04572365864264,0,1.62241263067758,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.748401490664606,0.896796041993948,1.12442069471675,0.258703370739016,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0,0,0.61734640922383,1.39323986772945,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0,1.89260953707715,3.91037527041281,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.758671603812327,0.799739588268102,0,0.203651327845314,0,0.350679099451593,0.189709611372772,0,0,0,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.390438744296638,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.809621403349789,2.63030272120181,1.58115111178609,1.28528526568723,0.283880170416537,0.534196811001766,2.11753047159649,0.164970122972535,0,0.485561272309963,0.906970670894253,0,0.295301892880773,0.614870295887855,0,0,0,0.316036757935816,0,0,0,1.08036656418786,1.16422815404479,1.07168517515796,0.886701168211368,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0,0,0,0.361877549568935,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,1.12738587736838,2.24274819065968,1.32366792365678,1.75006069509643,0.904118764344118,1.85851738039856,2.8165737274981,2.99470085141085,1.67774951081137,1.20792060413003,1.72818003754719,0.632022241256357,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0.403304740547362,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.538283139656854,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,2.82375921308533,1.84130094602871,1.71868654031819,5.15559547031063,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,1.55328093525546,0.207574695168353,1.19707462020309,1.19513524027894,0.243106717068294,1.25767897576789,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0,0.377252682772152,0.936415074698824,0.832326981263301,1.14870937911227,2.38146845641537,0.579421629724277,0.578727661391115,0,1.32479028120958,0,0.70990322463735,0.476872379894642,0.145346416632329,0.658765662907314,0.25384382367503,0,0.789209134313529,0.679020569229309,0.561142271657738,1.06771516311757,0.591026894253381,0,0.929621047115796,0.964533054905707,0.999242311751784,0.701794825336225,0,0.191288332068843,0,0 | |||
|short_description=p5@Lphn1 | |||
}} |
Latest revision as of 20:54, 25 September 2015
Short description: | p5@Lphn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lphn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENSMUST00000124355_5end |
EntrezGene: | Lphn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.98e-23 | 23 |
neuroblast (sensu Vertebrata) | 5.98e-23 | 23 |
neuron | 1.30e-17 | 33 |
neuronal stem cell | 1.30e-17 | 33 |
neuroblast | 1.30e-17 | 33 |
electrically signaling cell | 1.30e-17 | 33 |
neural cell | 2.22e-16 | 43 |
ectodermal cell | 7.77e-16 | 44 |
neurectodermal cell | 7.77e-16 | 44 |
electrically responsive cell | 6.95e-14 | 39 |
electrically active cell | 6.95e-14 | 39 |
embryonic cell | 2.41e-07 | 70 |