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FFCP PHASE1:Mm9::chr7:87343276..87343344,+: Difference between revisions

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{{FFCP|EntrezGene=20352|HGNC=|MCL_coexpression_id=202|UniProt=|association_with_transcript=0bp_to_uc009hzq.1_5end|description=CAGE_peak_3_at_Sema4b_5end|id=chr7:87343276..87343344,+|ontology_enrichment_celltype=CL:0002031!7.23e-11!25;CL:0000988!3.18e-09!32;CL:0002032!3.18e-09!32;CL:0000037!3.18e-09!32;CL:0000566!3.18e-09!32;CL:0000837!3.18e-09!32;CL:0000050!2.63e-07!9;CL:0000839!5.76e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,7.12e-11,25;CL:0000988,3.14e-09,32;CL:0002032,3.14e-09,32;CL:0000037,3.14e-09,32;CL:0000837,3.14e-09,32;CL:0000050,2.60e-07,9;CL:0000839,5.71e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.66e-14!48;UBERON:0002390!3.23e-13!45;UBERON:0003061!3.23e-13!45;UBERON:0002405!2.00e-11!70;UBERON:0004177!2.98e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.41e-14,48;UBERON:0002405,1.41e-14,48;UBERON:0002390,2.76e-13,45;UBERON:0003061,2.76e-13,45;UBERON:0004177,2.59e-08,29;UBERON:0005057,2.59e-08,29;UBERON:0001007,1.52e-07,116;UBERON:0001555,1.52e-07,116;UBERON:0007026,1.52e-07,116;UBERON:0004119,1.67e-07,118;UBERON:0000925,1.67e-07,118;UBERON:0006595,1.67e-07,118;UBERON:0000077,2.40e-07,35;UBERON:0004921,4.98e-07,114|phase1_expression=1.76163731815273,6.63053274514786,3.63999391511629,0.60492842261366,1.00179145989269,4.70061961353291,5.37309073369709,26.9867745992894,2.39340827657833,4.21316147379588,3.93801326918661,5.74359544766422,21.5712919713319,26.1387003232802,21.3190247562024,20.0450514715928,20.9868563438444,38.6441152563841,44.0137331874421,47.1072513495814,2.38121212422995,5.46100231604869,4.4403964153619,5.59973479776923,6.19405058881359,3.44539178469012,3.87685796543167,2.80112602491656,4.3705386474966,3.52842181663903,5.54326276638262,20.9560122241678,17.221814052368,15.8481681015439,4.62162591602039,4.82080471539628,4.49172583777212,11.7188856606334,13.2827008569046,4.71171369576418,8.2352408324342,15.7100461540443,11.6522484727477,1.76255545165808,2.12891555560981,1.65192076945513,2.34717403304412,2.8343270329458,2.19686182734472,1.36100929351998,2.2397827460058,4.31257693094915,21.3083909693325,12.3311564141929,15.7964085596958,1.02903774414379,3.43840127926508,2.06268836910977,4.24864567805155,1.5869729378161,1.26766280701236,2.03306719241479,4.4464739805557,5.39939830368839,6.92206453796882,7.8152812644071,4.49400165777607,6.53171119046643,4.97710139080693,6.88530285491622,4.20649922702764,6.85562362569129,4.8591079009355,5.51208596467293,3.64212789869298,8.27296907949019,1.10115880999389,1.53224805702225,1.0752457327937,1.71452174049252,3.93396867490361,3.12548022334056,0.837548997004143,1.68828783009504,3.20876320331301,3.53554302568401,3.41692033917847,2.98239113320481,3.63485727999283,4.38315048619356,2.31891590961342,0,0,0,0.649776417447669,0,2.66844398250329,2.89731548382698,1.81850203222008,1.06001872353102,2.39433813620357,2.56652954828636,2.54805239706646,0,2.16491041011214,2.28023878927589,4.04419556011827,2.74041311325744,15.2773351351831,2.52351636410202,2.94925055502431,1.52232739156071,1.84492397804847,1.50722640552623,3.64524992120685,2.38766523526383,3.21353458054686,2.89198713839823,13.2691582792481,2.75003644910596,10.8212344045593,7.75800405016355,0,1.46390398505774,3.35114730901528,5.10914110417183,3.11519323715393,2.39961092397363,4.44745794755726,2.54644086988199,2.74500361691176,7.66491547888473,3.47648640384553,3.3243009452943,2.0778804455956,2.92034273521964,2.85150218780886,9.20611582514688,2.52722758433675,1.26265113531884,1.43132487258974,0.689706313300419,1.44049703844279,1.50704817835715,2.31324097114515,1.2811372028485,2.15513966487376,1.03481348295606,0.215567992932842,1.51284864134255,1.93546236580344,1.31517439456545,2.22437799380478,3.1342694986995,3.70407845534298,1.39323986772945,2.1066395619397,3.86021860672073,6.25159698670304,1.03562886267751,1.17263029990548,0.720248245844059,1.42046841351126,0.983821158737019,0.308534225774757,0.930135779001631,1.07309360559848,0.467061369468678,0.658239399653922,0.656669856316381,1.29710095273369,1.16959989940266,1.53685080703735,0.805238512562231,2.3131894342054,6.17427674275707,4.95628174475697,1.05780226665418,1.06644125267617,2.09013004674395,2.57734922644187,3.42861991859682,3.11329261382818,3.61428689613862,2.84717436926707,5.92916237006439,5.52937459360593,5.96869416123452,5.45899443933536,5.39291645192533,1.72910439899755,2.38969527905241,0.948339504765408,1.14248512609729,3.38123207019241,0.814605311381257,1.74557238450863,2.31448205638051,1.96033265085198,2.06654207171443,1.72698600625512,1.60416313098341,0.296452627087149,4.83850806576673,7.86235980452812,8.09503604585473,10.5487263122022,6.51178331331525,7.63877555344259,5.75392274901621,8.91743747262695,7.96228098245436,7.18841032636773,4.83783231969054,3.74445207737473,1.01031551178845,1.61457672169721,1.92977408545347,4.43407656399851,2.27389694124582,2.11854469374634,2.54617628662782,3.28566347603903,3.85264392116176,4.99891645860629,4.29294025287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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20352
|HGNC=
|MCL_coexpression_id=202
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_uc009hzq.1_5end
|cluster_id=chr7:87343276..87343344,+
|description=CAGE_peak_3_at_Sema4b_5end
|id=chr7:87343276..87343344,+
|ontology_enrichment_celltype=CL:0002031!7.23e-11!25;CL:0000988!3.18e-09!32;CL:0002032!3.18e-09!32;CL:0000037!3.18e-09!32;CL:0000566!3.18e-09!32;CL:0000837!3.18e-09!32;CL:0000050!2.63e-07!9;CL:0000839!5.76e-07!13
|ontology_enrichment_celltype_v019_2=CL:0002031,7.12e-11,25;CL:0000988,3.14e-09,32;CL:0002032,3.14e-09,32;CL:0000037,3.14e-09,32;CL:0000837,3.14e-09,32;CL:0000050,2.60e-07,9;CL:0000839,5.71e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.66e-14!48;UBERON:0002390!3.23e-13!45;UBERON:0003061!3.23e-13!45;UBERON:0002405!2.00e-11!70;UBERON:0004177!2.98e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.41e-14,48;UBERON:0002405,1.41e-14,48;UBERON:0002390,2.76e-13,45;UBERON:0003061,2.76e-13,45;UBERON:0004177,2.59e-08,29;UBERON:0005057,2.59e-08,29;UBERON:0001007,1.52e-07,116;UBERON:0001555,1.52e-07,116;UBERON:0007026,1.52e-07,116;UBERON:0004119,1.67e-07,118;UBERON:0000925,1.67e-07,118;UBERON:0006595,1.67e-07,118;UBERON:0000077,2.40e-07,35;UBERON:0004921,4.98e-07,114
|phase1_expression=1.76163731815273,6.63053274514786,3.63999391511629,0.60492842261366,1.00179145989269,4.70061961353291,5.37309073369709,26.9867745992894,2.39340827657833,4.21316147379588,3.93801326918661,5.74359544766422,21.5712919713319,26.1387003232802,21.3190247562024,20.0450514715928,20.9868563438444,38.6441152563841,44.0137331874421,47.1072513495814,2.38121212422995,5.46100231604869,4.4403964153619,5.59973479776923,6.19405058881359,3.44539178469012,3.87685796543167,2.80112602491656,4.3705386474966,3.52842181663903,5.54326276638262,20.9560122241678,17.221814052368,15.8481681015439,4.62162591602039,4.82080471539628,4.49172583777212,11.7188856606334,13.2827008569046,4.71171369576418,8.2352408324342,15.7100461540443,11.6522484727477,1.76255545165808,2.12891555560981,1.65192076945513,2.34717403304412,2.8343270329458,2.19686182734472,1.36100929351998,2.2397827460058,4.31257693094915,21.3083909693325,12.3311564141929,15.7964085596958,1.02903774414379,3.43840127926508,2.06268836910977,4.24864567805155,1.5869729378161,1.26766280701236,2.03306719241479,4.4464739805557,5.39939830368839,6.92206453796882,7.8152812644071,4.49400165777607,6.53171119046643,4.97710139080693,6.88530285491622,4.20649922702764,6.85562362569129,4.8591079009355,5.51208596467293,3.64212789869298,8.27296907949019,1.10115880999389,1.53224805702225,1.0752457327937,1.71452174049252,3.93396867490361,3.12548022334056,0.837548997004143,1.68828783009504,3.20876320331301,3.53554302568401,3.41692033917847,2.98239113320481,3.63485727999283,4.38315048619356,2.31891590961342,0,0,0,0.649776417447669,0,2.66844398250329,2.89731548382698,1.81850203222008,1.06001872353102,2.39433813620357,2.56652954828636,2.54805239706646,0,2.16491041011214,2.28023878927589,4.04419556011827,2.74041311325744,15.2773351351831,2.52351636410202,2.94925055502431,1.52232739156071,1.84492397804847,1.50722640552623,3.64524992120685,2.38766523526383,3.21353458054686,2.89198713839823,13.2691582792481,2.75003644910596,10.8212344045593,7.75800405016355,0,1.46390398505774,3.35114730901528,5.10914110417183,3.11519323715393,2.39961092397363,4.44745794755726,2.54644086988199,2.74500361691176,7.66491547888473,3.47648640384553,3.3243009452943,2.0778804455956,2.92034273521964,2.85150218780886,9.20611582514688,2.52722758433675,1.26265113531884,1.43132487258974,0.689706313300419,1.44049703844279,1.50704817835715,2.31324097114515,1.2811372028485,2.15513966487376,1.03481348295606,0.215567992932842,1.51284864134255,1.93546236580344,1.31517439456545,2.22437799380478,3.1342694986995,3.70407845534298,1.39323986772945,2.1066395619397,3.86021860672073,6.25159698670304,1.03562886267751,1.17263029990548,0.720248245844059,1.42046841351126,0.983821158737019,0.308534225774757,0.930135779001631,1.07309360559848,0.467061369468678,0.658239399653922,0.656669856316381,1.29710095273369,1.16959989940266,1.53685080703735,0.805238512562231,2.3131894342054,6.17427674275707,4.95628174475697,1.05780226665418,1.06644125267617,2.09013004674395,2.57734922644187,3.42861991859682,3.11329261382818,3.61428689613862,2.84717436926707,5.92916237006439,5.52937459360593,5.96869416123452,5.45899443933536,5.39291645192533,1.72910439899755,2.38969527905241,0.948339504765408,1.14248512609729,3.38123207019241,0.814605311381257,1.74557238450863,2.31448205638051,1.96033265085198,2.06654207171443,1.72698600625512,1.60416313098341,0.296452627087149,4.83850806576673,7.86235980452812,8.09503604585473,10.5487263122022,6.51178331331525,7.63877555344259,5.75392274901621,8.91743747262695,7.96228098245436,7.18841032636773,4.83783231969054,3.74445207737473,1.01031551178845,1.61457672169721,1.92977408545347,4.43407656399851,2.27389694124582,2.11854469374634,2.54617628662782,3.28566347603903,3.85264392116176,4.99891645860629,4.29294025287157,4.41378403497335,2.43611158613652,4.30527875375215,3.76885623846197,4.14443956478149,3.03763023021174,4.52373851817817,2.17562273527484,9.34352118736169,8.27810238914197,1.28440471990234,1.87538698547525,1.96721934452011,2.52470927204373,3.78609863299508,1.56175497718655,4.09304455692318,3.10659437338318,4.01037613348309,3.39691836946599,4.45291771842384,2.04579100537918,2.37172666767914,2.57057053137446,2.55492153374884,3.02711526234334,3.25773918707152,2.8044920905331,0,1.94224508923985,3.02323556964751,1.88605079755898,2.95301892880773,1.22974059177571,3.6179961043551,5.45300594216258,3.20847640546249,1.8962205476149,0,1.03135543248187,2.04263763452273,0.720244376125241,1.4229455216103,0.643011105094777,1.95074257006501,2.67553226403106,1.97458824722545,1.8267896946876,1.87737366450968,4.66030555900404,0.441056796109924,5.27636009412736,6.78150592122803,5.06628569396509,3.34242563208782,3.11867709515616,4.37221254944776,2.03967832211561,16.7453463181896,2.47664241555867,6.48180845793991,16.9531611304222,23.7847956234584,22.4202609742392,2.20971958992012,2.6590775941495,2.3493995546752,5.72802370809068,0.790839983952838,3.86306987541013,2.59212817972323,2.92723614420256,3.71216358368502,3.64133735239016,3.63675205191478,2.6175594198403,3.75883422546199,3.72803587852155,0.56369293868419,1.64468200648377,0.992750942742586,1.75006069509643,1.80823752868824,1.18269287843545,2.69921648885234,2.47388331203505,2.9360616439199,0.966336483304024,1.72818003754719,8.84831137758899,3.64905387522296,4.82741498674688,4.54722880422283,6.98204113103178,7.54989148168807,7.69250876927801,7.23678683155428,6.46185279668145,9.14481679859998,7.36031151498936,10.233077477674,11.5454209968395,10.6357980985228,1.81384306892169,1.10992976687032,0.717710852875806,0.839423081820392,5.21611903886914,2.064507229963,3.11357761254351,5.78794623513478,1.50471631210609,1.12950368523413,2.30162618253588,2.29158205375759,2.40594455281163,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,3.17199686288943,2.5888015587591,0.518936737920883,1.19707462020309,3.41467211508268,4.132814190161,2.09613162627982,1.2869045591501,3.55594764482584,3.09052585858341,1.92551525755089,2.27427490587418,2.02783439912192,2.45214243801899,2.99652823903624,3.20125762024346,2.1825478203133,1.90517476513229,3.59241410429052,1.54327376370964,3.29668720642645,3.09117732282234,2.74295401908332,2.8396128985494,3.09967046931517,2.61623549938191,2.91739079287525,3.21535509988371,2.37806364734604,2.10455769150274,3.39510284614654,3.36685362994643,4.38949567059444,3.15214343601803,4.09231043169689,2.78886314134739,2.70069255373598,3.49734809113124,2.8071793013449,3.65280791882107,1.14772999241306,5.7353768971074,5.10109238364927
|short_description=p3@Sema4b
}}

Latest revision as of 03:27, 27 September 2015

Short description:p3@Sema4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sema4b_5end
Coexpression cluster:MCL_coexpression_mm9:202
Association with transcript: 0bp_to_uc009hzq.1_5end
EntrezGene:Sema4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sema4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A238.64
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A444.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.11
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.31
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H915.28
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F17.66
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G16.17
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D710.55
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F48.92
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H35.07
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G216.75
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D116.95
spleen, neonate N20.CNhs11112.824-19H123.78
spleen, neonate N25.CNhs11099.1354-25G322.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C46.46
thymus, neonate N07.CNhs11211.713-19D39.14
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A210.23
thymus, neonate N25.CNhs11125.1362-25G711.55
thymus, neonate N30.CNhs11132.1393-42G210.64
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B45.10





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.41e-1448
immune system1.41e-1448
hematopoietic system2.76e-1345
blood island2.76e-1345
hemopoietic organ2.59e-0829
immune organ2.59e-0829
digestive system1.52e-07116
digestive tract1.52e-07116
primitive gut1.52e-07116
endoderm-derived structure1.67e-07118
endoderm1.67e-07118
presumptive endoderm1.67e-07118
mixed endoderm/mesoderm-derived structure2.40e-0735
subdivision of digestive tract4.98e-07114
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