FFCP PHASE1:Hg19::chrX:78619044..78619053,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6173 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000462038_5end | |||
|cluster_id=chrX:78619044..78619053,- | |||
|coexpression_cluster_id=C2962 | |||
|description=CAGE_peak_10_at_ITM2A_5end | |||
|id=chrX:78619044..78619053,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.61e-34;1!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002081!5.22e-09!2;UBERON:0002360!7.90e-08!2;UBERON:0000094!7.90e-08!2;UBERON:0007645!7.90e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;3.96e-66;2!UBERON:0004151;1.53e-44;3!UBERON:0002079;3.61e-34;1!UBERON:0002134;7.06e-34;1!UBERON:0005208;7.06e-34;1!UBERON:0004145;7.06e-34;1!UBERON:0005946;7.06e-34;1!UBERON:0005965;7.06e-34;1!UBERON:0002078;7.06e-34;1!UBERON:0003127;1.07e-17;2!UBERON:0002133;1.07e-17;2!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0002114;2.89e-12;2!UBERON:0002346;1.12e-09;4!UBERON:0000923;1.12e-09;4!UBERON:0010316;1.12e-09;4!UBERON:0005291;1.12e-09;4!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5!UBERON:0002108;7.01e-08;4!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,3.96e-66,2;UBERON:0010227,3.96e-66,2;UBERON:0004151,1.53e-44,3;UBERON:0002079,3.61e-34,1;UBERON:0002134,7.06e-34,1;UBERON:0005208,7.06e-34,1;UBERON:0005946,7.06e-34,1;UBERON:0005965,7.06e-34,1;UBERON:0002078,7.06e-34,1;UBERON:0002133,1.07e-17,2;UBERON:0003127,1.27e-17,2;UBERON:0002114,2.59e-12,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0004145,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0002108,6.55e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.637724760305049,5.08136633461909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0.202117188958219,0.217716747896961,0.684466602170562,0,0,1.33064142618405,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@ITM2A | |||
}} |
Latest revision as of 12:13, 16 September 2015
Short description: | p10@ITM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITM2A_5end |
Coexpression cluster: | C2962_neuroectodermal_chronic_diaphragm_left_acute_trachea_temporal |
Association with transcript: | 0bp_to_ENST00000462038_5end |
EntrezGene: | ITM2A |
HGNC: | 6173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 3.96e-66 | 2 |
future cardiac atrium | 3.96e-66 | 2 |
cardiac chamber | 1.53e-44 | 3 |
left cardiac atrium | 3.61e-34 | 1 |
tricuspid valve | 7.06e-34 | 1 |
right atrium valve | 7.06e-34 | 1 |
outflow tract of atrium | 7.06e-34 | 1 |
outflow part of right atrium | 7.06e-34 | 1 |
right cardiac atrium | 7.06e-34 | 1 |
atrioventricular valve | 1.07e-17 | 2 |
open tracheal system trachea | 1.27e-17 | 2 |
duodenum | 2.59e-12 | 2 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
outflow tract | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
small intestine | 6.55e-08 | 4 |