FFCP PHASE1:Mm9::chr7:138141963..138141967,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:138141963..138141967,-|id=chr7:138141963..138141967,-|ontology_enrichment_celltype=CL:0000473!5.59e-23!3;CL:0000627!5.59e-23!3;CL:0000682!5.59e-23!3;CL:0002563!3.50e-20!9;CL:0002251!3.50e-20!9;CL:0000239!7.40e-20!6;CL:0000677!7.40e-20!6;CL:0000212!7.40e-20!6;CL:0000584!7.40e-20!6;CL:0000066!3.47e-18!25;CL:0000075!4.47e-17!7;CL:0002076!3.82e-12!15;CL:0000223!4.12e-09!20|ontology_enrichment_celltype_v019_2=CL:0000682,3.61e-33,3;CL:0000239,6.79e-17,6;CL:0000677,6.79e-17,6;CL:0000584,6.79e-17,6;CL:0000066,1.01e-15,25;CL:0000473,1.11e-14,7;CL:0000075,1.37e-14,7;CL:0002563,1.66e-11,9;CL:0002251,1.66e-11,9;CL:0002076,3.73e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.07e-30!15;UBERON:0004923!6.19e-24!24;UBERON:0003350!3.50e-20!9;UBERON:0004808!3.50e-20!9;UBERON:0001277!3.50e-20!9;UBERON:0001242!4.15e-20!13;UBERON:0000060!4.15e-20!13;UBERON:0001262!4.15e-20!13;UBERON:0004786!4.15e-20!13;UBERON:0000485!1.55e-16!11;UBERON:0001962!9.61e-16!2;UBERON:0001961!9.61e-16!2;UBERON:0001744!9.61e-16!2;UBERON:0002465!8.12e-11!3;UBERON:0003199!6.23e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.63e-18,15;UBERON:0001242,6.60e-14,13;UBERON:0001262,6.60e-14,13;UBERON:0004786,6.60e-14,13;UBERON:0003199,2.01e-12,1;UBERON:0004923,1.12e-11,24;UBERON:0003350,1.66e-11,9;UBERON:0004808,1.66e-11,9;UBERON:0001277,1.66e-11,9;UBERON:0000485,1.56e-09,11;UBERON:0001962,7.59e-07,2;UBERON:0001961,7.59e-07,2;UBERON:0001744,7.59e-07,2|phase1_expression=0,1.39590163055744,3.63999391511629,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,2.75291137280604,1.72269589234506,1.7230479846363,2.15471232685889,0,0,4.8780712344167,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:138141963..138141967,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:138141963..138141967,- | |||
|description=CAGE_peak_at_chr7:138141963..138141967,- | |||
|id=chr7:138141963..138141967,- | |||
|ontology_enrichment_celltype=CL:0000473!5.59e-23!3;CL:0000627!5.59e-23!3;CL:0000682!5.59e-23!3;CL:0002563!3.50e-20!9;CL:0002251!3.50e-20!9;CL:0000239!7.40e-20!6;CL:0000677!7.40e-20!6;CL:0000212!7.40e-20!6;CL:0000584!7.40e-20!6;CL:0000066!3.47e-18!25;CL:0000075!4.47e-17!7;CL:0002076!3.82e-12!15;CL:0000223!4.12e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.61e-33,3;CL:0000239,6.79e-17,6;CL:0000677,6.79e-17,6;CL:0000584,6.79e-17,6;CL:0000066,1.01e-15,25;CL:0000473,1.11e-14,7;CL:0000075,1.37e-14,7;CL:0002563,1.66e-11,9;CL:0002251,1.66e-11,9;CL:0002076,3.73e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-30!15;UBERON:0004923!6.19e-24!24;UBERON:0003350!3.50e-20!9;UBERON:0004808!3.50e-20!9;UBERON:0001277!3.50e-20!9;UBERON:0001242!4.15e-20!13;UBERON:0000060!4.15e-20!13;UBERON:0001262!4.15e-20!13;UBERON:0004786!4.15e-20!13;UBERON:0000485!1.55e-16!11;UBERON:0001962!9.61e-16!2;UBERON:0001961!9.61e-16!2;UBERON:0001744!9.61e-16!2;UBERON:0002465!8.12e-11!3;UBERON:0003199!6.23e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.63e-18,15;UBERON:0001242,6.60e-14,13;UBERON:0001262,6.60e-14,13;UBERON:0004786,6.60e-14,13;UBERON:0003199,2.01e-12,1;UBERON:0004923,1.12e-11,24;UBERON:0003350,1.66e-11,9;UBERON:0004808,1.66e-11,9;UBERON:0001277,1.66e-11,9;UBERON:0000485,1.56e-09,11;UBERON:0001962,7.59e-07,2;UBERON:0001961,7.59e-07,2;UBERON:0001744,7.59e-07,2 | |||
|phase1_expression=0,1.39590163055744,3.63999391511629,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,2.75291137280604,1.72269589234506,1.7230479846363,2.15471232685889,0,0,4.8780712344167,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:138141963..138141967,- | |||
}} |
Latest revision as of 09:14, 4 August 2015
Short description: | p@chr7:138141963..138141967, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:138141963..138141967, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.61e-33 | 3 |
brush border epithelial cell | 6.79e-17 | 6 |
gut absorptive cell | 6.79e-17 | 6 |
enterocyte | 6.79e-17 | 6 |
epithelial cell | 1.01e-15 | 25 |
defensive cell | 1.11e-14 | 7 |
columnar/cuboidal epithelial cell | 1.37e-14 | 7 |
intestinal epithelial cell | 1.66e-11 | 9 |
epithelial cell of alimentary canal | 1.66e-11 | 9 |
endo-epithelial cell | 3.73e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.63e-18 | 15 |
intestinal mucosa | 6.60e-14 | 13 |
wall of intestine | 6.60e-14 | 13 |
gastrointestinal system mucosa | 6.60e-14 | 13 |
egg chamber | 2.01e-12 | 1 |
organ component layer | 1.12e-11 | 24 |
epithelium of mucosa | 1.66e-11 | 9 |
gastrointestinal system epithelium | 1.66e-11 | 9 |
intestinal epithelium | 1.66e-11 | 9 |
simple columnar epithelium | 1.56e-09 | 11 |
gut-associated lymphoid tissue | 7.59e-07 | 2 |
mucosa-associated lymphoid tissue | 7.59e-07 | 2 |
lymphoid tissue | 7.59e-07 | 2 |