FFCP PHASE1:Hg19::chrX:45212835..45212854,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:45212835..45212854,+ | |||
|description=CAGE_peak_at_chrX:45212835..45212854,+ | |||
|id=chrX:45212835..45212854,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.46e-47!75;CL:0002620!2.54e-39!23;CL:0000055!9.67e-31!180;CL:0002334!1.25e-17!12;CL:0000048!4.00e-16!430;CL:0000723!1.26e-15!436;CL:0000034!5.52e-15!444;CL:0000134!1.54e-14!358;CL:0002320!6.44e-14!365;CL:0000219!1.04e-13!390;CL:0002556!1.24e-12!6;CL:0002551!2.10e-12!6;CL:0002570!1.94e-10!8;CL:0002371!6.58e-10!591;CL:0000144!3.19e-08!625;CL:0002580!7.68e-08!3;CL:0000346!8.61e-08!3;CL:1000428!8.61e-08!3;CL:0000135!1.32e-07!3;CL:0000386!1.32e-07!3;CL:0000388!1.32e-07!3;CL:0002579!5.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.12e-28;23!CL:0002334;4.85e-19;12!CL:0002570;1.92e-15;8!CL:0000346;1.38e-14;3!CL:1000428;1.38e-14;3!CL:0000057;1.82e-12;73!CL:0002583;1.46e-10;2!CL:0002559;5.94e-09;5!CL:0002582;1.28e-07;3!CL:0002580;1.93e-07;3!CL:0000135;2.26e-07;3!CL:0000388;2.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.94e-34,76;CL:0002620,4.26e-28,23;CL:0002334,4.47e-19,12;CL:0002570,2.20e-15,8;CL:0000346,1.22e-14,3;CL:1000428,1.22e-14,3;CL:0002583,1.95e-10,2;CL:0000134,2.68e-10,354;CL:0002320,5.93e-10,361;CL:0000219,1.51e-09,386;CL:0002559,5.55e-09,5;CL:0000048,5.63e-08,427;CL:0000723,9.27e-08,433;CL:0002582,1.31e-07,3;CL:0002580,1.49e-07,3;CL:0000034,1.77e-07,441;CL:0000135,2.26e-07,3;CL:0000388,2.26e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.92e-12!5;DOID:450!3.92e-12!5;DOID:66!3.92e-12!5;DOID:423!3.92e-12!5;DOID:0080000!3.92e-12!5;DOID:11722!3.92e-12!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.59e-16;5!DOID:450;3.59e-16;5!DOID:66;3.59e-16;5!DOID:423;3.59e-16;5!DOID:0080000;3.59e-16;5!DOID:11722;3.59e-16;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.81e-16,5;DOID:450,4.81e-16,5;DOID:66,4.81e-16,5;DOID:423,4.81e-16,5;DOID:0080000,4.81e-16,5;DOID:11722,4.81e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.24e-33!45;UBERON:0002416!5.24e-33!45;UBERON:0002097!1.47e-29!40;UBERON:0003102!7.00e-24!95;UBERON:0002067!1.70e-18!9;UBERON:0004016!1.70e-18!9;UBERON:0010083!1.70e-18!9;UBERON:0002384!7.95e-14!375;UBERON:0001758!1.24e-12!6;UBERON:0003672!1.24e-12!6;UBERON:0000914!3.89e-11!83;UBERON:0002329!3.89e-11!83;UBERON:0003077!3.89e-11!83;UBERON:0003059!3.89e-11!83;UBERON:0007282!3.89e-11!83;UBERON:0009618!3.89e-11!83;UBERON:0007285!3.89e-11!83;UBERON:0001013!1.10e-09!14;UBERON:0003129!1.09e-08!11;UBERON:0000412!8.61e-08!3;UBERON:0001992!8.61e-08!3;UBERON:0000043!1.32e-07!3;UBERON:0000075!3.48e-07!13;UBERON:0005944!3.48e-07!13;UBERON:0004288!3.48e-07!13;UBERON:0003089!3.48e-07!13;UBERON:0004290!7.38e-07!70;UBERON:0000475!8.47e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.49e-22;41!UBERON:0002199;3.41e-21;46!UBERON:0002416;3.41e-21;46!UBERON:0003102;1.40e-17;50!UBERON:0000412;1.38e-14;3!UBERON:0001992;1.38e-14;3!UBERON:0001013;3.26e-12;14!UBERON:0002072;3.29e-09;5!UBERON:0002073;5.94e-09;5!UBERON:0002067;2.00e-08;9!UBERON:0007846;2.26e-07;3!UBERON:0000043;2.26e-07;3!UBERON:0007845;2.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.60e-33,46;UBERON:0002416,2.60e-33,46;UBERON:0002097,1.85e-26,41;UBERON:0003102,3.23e-18,99;UBERON:0000412,1.22e-14,3;UBERON:0001992,1.22e-14,3;UBERON:0001013,3.53e-12,14;UBERON:0002384,2.33e-10,371;UBERON:0002072,3.85e-09,5;UBERON:0002073,5.55e-09,5;UBERON:0005086,5.55e-09,5;UBERON:0002067,1.94e-08,9;UBERON:0004016,1.94e-08,9;UBERON:0010083,1.94e-08,9;UBERON:0007846,2.26e-07,3;UBERON:0000043,2.26e-07,3;UBERON:0007845,2.26e-07,3 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.58891016975863,0,0,0,0,0,0,0,0,0,0,0,0.936480230490962,0.570471821544449,0.298897361103602,0.352303495931295,1.29498355494505,0.561803226808994,0,0,0,1.18800285728205,0.741800787835671,0,0,0.505008341862199,0.500474079487857,0.831192346452549,1.31693286264251,1.5324389789951,0.300476117813194,0,6.27863724911017,0.640672166455702,4.02670612203168,3.30100205692843,1.23663035086127,1.28820270022815,0.744467425326359,32.9113847870469,7.2103383819287,4.29137416214995,0.920498986422993,0.80823028409406,2.84007674013291,1.20902517873168,3.39121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,1.73737568001095,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,3.32112799267718,0.184369168541703,3.90976265106373,0,0,0,0,0,0,0,0,0.744323423456331,5.52463103837025,1.96462066103151,0.128139149255701,2.55853624533352,0.482561763430822,0,3.23840356985577,1.24293207719189,5.09188367285617,0,2.44041794765914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4328604663981,2.33713309847224,2.21922344601045,0.189403005275089,0.251567901752575,0.889811221596536,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,4.46414416737631,5.05124233148879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chrX:45212835..45212854,+ | |||
}} |
Latest revision as of 08:11, 1 August 2015
Short description: | p@chrX:45212835..45212854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:45212835..45212854, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.94e-34 | 76 |
skin fibroblast | 4.26e-28 | 23 |
preadipocyte | 4.47e-19 | 12 |
mesenchymal stem cell of adipose | 2.20e-15 | 8 |
hair follicle dermal papilla cell | 1.22e-14 | 3 |
stem cell of epidermis | 1.22e-14 | 3 |
subcutaneous preadipocyte | 1.95e-10 | 2 |
mesenchymal cell | 2.68e-10 | 354 |
connective tissue cell | 5.93e-10 | 361 |
motile cell | 1.51e-09 | 386 |
hair follicle cell | 5.55e-09 | 5 |
multi fate stem cell | 5.63e-08 | 427 |
somatic stem cell | 9.27e-08 | 433 |
visceral preadipocyte | 1.31e-07 | 3 |
preadipocyte of the breast | 1.49e-07 | 3 |
stem cell | 1.77e-07 | 441 |
fibrocyte | 2.26e-07 | 3 |
tendon cell | 2.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 2.60e-33 | 46 |
integumental system | 2.60e-33 | 46 |
skin of body | 1.85e-26 | 41 |
surface structure | 3.23e-18 | 99 |
dermal papilla | 1.22e-14 | 3 |
papillary layer of dermis | 1.22e-14 | 3 |
adipose tissue | 3.53e-12 | 14 |
connective tissue | 2.33e-10 | 371 |
hypodermis | 3.85e-09 | 5 |
hair follicle | 5.55e-09 | 5 |
hair follicle placode | 5.55e-09 | 5 |
dermis | 1.94e-08 | 9 |
dermatome | 1.94e-08 | 9 |
future dermis | 1.94e-08 | 9 |
dense regular connective tissue | 2.26e-07 | 3 |
tendon | 2.26e-07 | 3 |
regular connective tissue | 2.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.81e-16 | 5 |
myotonic disease | 4.81e-16 | 5 |
muscle tissue disease | 4.81e-16 | 5 |
myopathy | 4.81e-16 | 5 |
muscular disease | 4.81e-16 | 5 |
myotonic dystrophy | 4.81e-16 | 5 |