FFCP PHASE1:Hg19::chrX:2747022..2747035,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4700 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000522988_5end | |||
|cluster_id=chrX:2747022..2747035,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_4_at_GYG2_5end | |||
|id=chrX:2747022..2747035,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.13e-13!10;CL:0000541!1.13e-13!10;CL:0000147!2.55e-11!14;CL:0000325!1.20e-10!39;CL:0002322!3.31e-09!5;CL:0000710!1.11e-08!20;CL:0000075!6.54e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.17e-11;13!CL:0000333;7.37e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.85e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-12;3!UBERON:0003057;1.33e-12;3 | |||
|ontology_enrichment_disease=DOID:3095!1.03e-07!22;DOID:2994!1.03e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.88e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.86e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.69e-21!90;UBERON:0001049!9.14e-20!57;UBERON:0005068!9.14e-20!57;UBERON:0006241!9.14e-20!57;UBERON:0007135!9.14e-20!57;UBERON:0005743!1.78e-19!86;UBERON:0003076!2.85e-19!15;UBERON:0003057!2.85e-19!15;UBERON:0000073!3.29e-19!94;UBERON:0001016!3.29e-19!94;UBERON:0007023!7.41e-19!115;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0001017!1.98e-18!82;UBERON:0002616!1.67e-15!59;UBERON:0002298!3.45e-15!8;UBERON:0004733!3.63e-14!12;UBERON:0002028!3.63e-14!12;UBERON:0007277!3.63e-14!12;UBERON:0000955!4.87e-14!69;UBERON:0006238!4.87e-14!69;UBERON:0000924!1.65e-13!173;UBERON:0006601!1.65e-13!173;UBERON:0004732!7.05e-13!13;UBERON:0004121!1.00e-11!169;UBERON:0000033!6.20e-11!123;UBERON:0000153!1.10e-10!129;UBERON:0007811!1.10e-10!129;UBERON:0002680!2.66e-09!9;UBERON:0001895!2.66e-09!9;UBERON:0010092!2.66e-09!9;UBERON:0002308!3.19e-09!9;UBERON:0000125!3.19e-09!9;UBERON:0003056!2.11e-08!61;UBERON:0003080!2.28e-07!42;UBERON:0002240!5.61e-07!3;UBERON:0006331!7.33e-07!3;UBERON:0001896!7.47e-07!3;UBERON:0005290!7.47e-07!3;UBERON:0010096!7.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.62e-23;6!UBERON:0002148;5.33e-18;2!UBERON:0006331;5.33e-18;2!UBERON:0009662;5.33e-18;2!UBERON:0002240;1.33e-12;3!UBERON:0005174;1.33e-12;3!UBERON:0001137;1.33e-12;3!UBERON:0000988;2.52e-12;3!UBERON:0001896;2.52e-12;3!UBERON:0005290;2.52e-12;3!UBERON:0004733;1.39e-11;12!UBERON:0002028;1.39e-11;12!UBERON:0004732;1.04e-10;13!UBERON:0002038;7.22e-10;1!UBERON:0009661;7.22e-10;1!UBERON:0002950;7.22e-10;1!UBERON:0001891;7.22e-10;1!UBERON:0000125;4.32e-09;9!UBERON:0002308;4.32e-09;9!UBERON:0000013;7.37e-08;5!UBERON:0002410;7.37e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.70e-23,6;UBERON:0003076,2.68e-20,15;UBERON:0003057,2.68e-20,15;UBERON:0002148,6.35e-18,2;UBERON:0006331,6.35e-18,2;UBERON:0009662,6.35e-18,2;UBERON:0002240,9.95e-13,3;UBERON:0005174,9.95e-13,3;UBERON:0001137,9.95e-13,3;UBERON:0001896,1.59e-12,3;UBERON:0005290,1.59e-12,3;UBERON:0010096,1.59e-12,3;UBERON:0000988,2.83e-12,3;UBERON:0004733,1.18e-11,12;UBERON:0002028,1.18e-11,12;UBERON:0007277,1.18e-11,12;UBERON:0004732,8.95e-11,13;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0000125,5.34e-09,9;UBERON:0002308,5.34e-09,9;UBERON:0001049,1.24e-08,56;UBERON:0005068,1.24e-08,56;UBERON:0006241,1.24e-08,56;UBERON:0007135,1.24e-08,56;UBERON:0000013,7.25e-08,5;UBERON:0002410,7.25e-08,5;UBERON:0001016,8.16e-08,89;UBERON:0002346,9.40e-07,86 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.464775771478074,0.414644220061482,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,2.34434894420094,0,0.308482478109971,0.300343057843917,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.54941678891006,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0.886642856860642,0,0,0,0.0769502585037971,0.227884111694002,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.808813595768125,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,0.551482276150566,0.329663433524666,0.13480708770837,0,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,1.0342636508924,1.19009341568421,0,0,0,0,0,0,0,0,0,14.6884806909758,6.5179372445902,11.0284407634846,12.4591599669726,0,0,0,0,0.573409195690071,1.66393577305278,1.55241007353459,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98805289526203,0,0.848662649770126,5.52694792264376,0,1.11728983594649,0,0,0,0.352675943690684,0,0.128458450192919,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.356760272332706,0,0,0,0,0,0,0,0,1.96308467114945,4.1586496045792,0.8453114551668,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0,0,0,0,0,0,0.504665699340316,0.109265571963696,1.0135880080915,0,0,0.0918948995348449,0,0,0,0,0.413731983447581,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@GYG2 | |||
}} |
Latest revision as of 19:39, 24 September 2015
Short description: | p4@GYG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GYG2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 30bp_to_ENST00000522988_5end |
EntrezGene: | GYG2 |
HGNC: | 4700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.85e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
brainstem | 4.70e-23 | 6 |
posterior neural tube | 2.68e-20 | 15 |
chordal neural plate | 2.68e-20 | 15 |
locus ceruleus | 6.35e-18 | 2 |
brainstem nucleus | 6.35e-18 | 2 |
hindbrain nucleus | 6.35e-18 | 2 |
spinal cord | 9.95e-13 | 3 |
dorsal region element | 9.95e-13 | 3 |
dorsum | 9.95e-13 | 3 |
medulla oblongata | 1.59e-12 | 3 |
myelencephalon | 1.59e-12 | 3 |
future myelencephalon | 1.59e-12 | 3 |
pons | 2.83e-12 | 3 |
segmental subdivision of hindbrain | 1.18e-11 | 12 |
hindbrain | 1.18e-11 | 12 |
presumptive hindbrain | 1.18e-11 | 12 |
segmental subdivision of nervous system | 8.95e-11 | 13 |
substantia nigra | 1.17e-09 | 1 |
midbrain nucleus | 1.17e-09 | 1 |
regional part of midbrain | 1.17e-09 | 1 |
midbrain | 1.17e-09 | 1 |
presumptive midbrain | 1.17e-09 | 1 |
midbrain neural tube | 1.17e-09 | 1 |
neural nucleus | 5.34e-09 | 9 |
nucleus of brain | 5.34e-09 | 9 |
neural tube | 1.24e-08 | 56 |
neural rod | 1.24e-08 | 56 |
future spinal cord | 1.24e-08 | 56 |
neural keel | 1.24e-08 | 56 |
sympathetic nervous system | 7.25e-08 | 5 |
autonomic nervous system | 7.25e-08 | 5 |
nervous system | 8.16e-08 | 89 |
neurectoderm | 9.40e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.86e-08 | 10 |