FFCP PHASE1:Hg19::chrX:2715135..2715149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:2715135..2715149,+ | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_at_chrX:2715135..2715149,+ | |||
|id=chrX:2715135..2715149,+ | |||
|ontology_enrichment_celltype=CL:0000864!2.71e-19!1;CL:0000091!2.71e-19!1;CL:0002274!3.35e-15!5;CL:0000457!3.35e-15!5;CL:0002191!3.35e-15!5;CL:0000097!3.35e-15!5;CL:0000831!3.35e-15!5;CL:0002028!3.35e-15!5;CL:0002535!1.89e-10!2;CL:0000163!7.16e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!2.71e-19!1;DOID:3193!1.57e-10!2;DOID:962!1.57e-10!2;DOID:3350!2.49e-10!2;DOID:171!2.53e-08!10;DOID:1192!1.93e-07!3;DOID:3093!5.81e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3193;5.04e-34;2!DOID:962;5.04e-34;2!DOID:171;2.08e-27;10!DOID:1192;3.27e-23;3!DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22!DOID:169;2.45e-12;6!DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:171,2.08e-27,10;DOID:1192,3.27e-23,3;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22;DOID:169,2.45e-12,6;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000996!1.88e-19!1;UBERON:0003296!3.92e-19!4;UBERON:0010133!3.92e-19!4;UBERON:0001894!2.30e-11!7;UBERON:0006222!2.30e-11!7;UBERON:0003714!1.57e-10!2;UBERON:0001905!1.72e-10!2;UBERON:0002757!1.72e-10!2;UBERON:0010134!1.72e-10!2;UBERON:0002784!1.72e-10!2;UBERON:0005408!1.72e-10!2;UBERON:0001899!1.72e-10!2;UBERON:0006955!1.89e-10!2;UBERON:0004801!1.89e-10!2;UBERON:0000007!2.27e-10!2;UBERON:0003497!2.63e-07!3;UBERON:0003909!2.63e-07!3;UBERON:0003835!2.63e-07!3;UBERON:0001281!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;5.04e-34;2!UBERON:0001905;7.05e-34;2!UBERON:0002757;7.05e-34;2!UBERON:0010134;7.05e-34;2!UBERON:0005408;7.05e-34;2!UBERON:0001899;7.05e-34;2!UBERON:0002346;7.35e-18;4!UBERON:0000923;7.35e-18;4!UBERON:0010316;7.35e-18;4!UBERON:0005291;7.35e-18;4!UBERON:0003296;1.03e-17;4!UBERON:0010133;1.03e-17;4!UBERON:0002784;1.03e-17;4!UBERON:0002050;1.40e-14;5!UBERON:0005423;1.40e-14;5!UBERON:0000013;1.60e-14;5!UBERON:0002410;1.60e-14;5!UBERON:0001894;9.89e-11;7!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0000010,1.12e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6521831152186,0,0,7.82102885162541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chrX:2715135..2715149,+ | |||
}} |
Latest revision as of 07:40, 1 August 2015
Short description: | p@chrX:2715135..2715149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:2715135..2715149, + |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.04e-34 | 2 |
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 5.04e-34 | 2 |
neurofibroma | 5.04e-34 | 2 |
neuroectodermal tumor | 2.08e-27 | 10 |
peripheral nervous system neoplasm | 3.27e-23 | 3 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |
neuroendocrine tumor | 2.45e-12 | 6 |
nervous system cancer | 7.92e-07 | 11 |