FFCP PHASE1:Hg19::chrX:15683092..15683103,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57393 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29437 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBJ8 | |||
|association_with_transcript=50bp_to_ENST00000380342,NM_020665,uc004cxc.1_5end | |||
|cluster_id=chrX:15683092..15683103,- | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_4_at_TMEM27_5end | |||
|id=chrX:15683092..15683103,- | |||
|ontology_enrichment_celltype=CL:0002251!8.33e-12!21;CL:0002541!6.79e-11!3;CL:0002076!1.49e-09!43;CL:0002336!3.28e-08!1;CL:0002261!3.28e-08!1;CL:0002170!3.28e-08!1;CL:0000076!3.72e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.32e-32!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:1749;2.55e-29;14!DOID:4362;4.21e-21;5!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,5.96e-34,3;DOID:1749,2.55e-29,14;DOID:4362,4.21e-21,5;DOID:3908,5.15e-21,5;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0003729!4.03e-23!5;UBERON:0003343!6.21e-17!4;UBERON:0004785!6.21e-17!4;UBERON:0000476!6.79e-11!3;UBERON:0000920!6.79e-11!3;UBERON:0003124!4.20e-10!7;UBERON:0000344!9.49e-10!12;UBERON:0004913!2.29e-08!1;UBERON:0003703!2.29e-08!1;UBERON:0001174!2.29e-08!1;UBERON:0004914!2.29e-08!1;UBERON:0002394!4.88e-08!4;UBERON:0003928!4.88e-08!4;UBERON:0000974!4.55e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082498500553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@TMEM27 | |||
}} |
Latest revision as of 05:13, 20 September 2015
Short description: | p4@TMEM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM27_5end |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | 50bp_to_ENST00000380342, NM_020665, uc004cxc.1_5end |
EntrezGene: | TMEM27 |
HGNC: | 29437 |
UniProt: | Q9HBJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.96e-34 | 3 |
squamous cell carcinoma | 2.55e-29 | 14 |
cervical cancer | 4.21e-21 | 5 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |