FFCP PHASE1:Hg19::chrX:131353636..131353655,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21165 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-161bp_to_uc004ewq.3,uc010nrk.2_5end | |||
|cluster_id=chrX:131353636..131353655,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_15_at_RAP2C_5end | |||
|id=chrX:131353636..131353655,- | |||
|ontology_enrichment_celltype=CL:0002057!4.23e-30!42;CL:0000860!1.24e-27!45;CL:0000766!1.41e-19!76;CL:0002194!3.59e-19!63;CL:0000576!3.59e-19!63;CL:0000040!3.59e-19!63;CL:0000559!3.59e-19!63;CL:0002009!2.21e-18!65;CL:0000839!1.31e-16!70;CL:0000557!2.77e-16!71;CL:0000763!5.62e-11!112;CL:0000049!5.62e-11!112;CL:0002087!8.10e-11!119;CL:0000738!8.59e-11!140;CL:0002031!3.68e-09!124;CL:0000037!2.25e-07!172;CL:0000566!2.25e-07!172;CL:0002032!2.86e-07!165;CL:0000837!2.86e-07!165;CL:0000771!8.59e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-42;33!CL:0002057;2.57e-42;33!CL:0000473;3.04e-30;39!CL:0000234;3.04e-30;39!CL:0000576;7.07e-26;48!CL:0000766;1.35e-21;69!CL:0000771;6.47e-17;2!CL:0002393;1.60e-12;6!CL:0002397;1.60e-12;6!CL:0002087;6.59e-12;104!CL:0000763;5.41e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-52,42;CL:0002057,1.10e-52,42;CL:0000473,9.81e-46,48;CL:0000234,9.81e-46,48;CL:0000766,1.17e-36,72;CL:0002194,5.33e-36,59;CL:0000576,5.33e-36,59;CL:0000040,5.33e-36,59;CL:0000559,5.33e-36,59;CL:0002009,9.64e-35,61;CL:0000839,6.29e-32,66;CL:0000557,2.05e-31,67;CL:0000763,1.81e-23,108;CL:0000049,1.81e-23,108;CL:0000738,3.96e-20,136;CL:0002087,2.12e-19,115;CL:0000771,8.24e-17,2;CL:0002031,2.53e-16,120;CL:0000037,1.17e-15,168;CL:0002032,1.08e-14,161;CL:0000837,1.08e-14,161;CL:0000988,1.09e-14,177;CL:0002393,1.45e-08,9;CL:0002397,1.45e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-35;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.81e-14!80;UBERON:0002405!3.37e-13!115;UBERON:0004765!1.14e-12!101;UBERON:0001434!1.14e-12!101;UBERON:0001474!2.44e-12!86;UBERON:0002390!1.93e-11!102;UBERON:0003061!1.93e-11!102;UBERON:0002193!7.88e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.82e-09;1!UBERON:0002134;3.82e-09;1!UBERON:0005208;3.82e-09;1!UBERON:0004145;3.82e-09;1!UBERON:0005946;3.82e-09;1!UBERON:0005965;3.82e-09;1!UBERON:0002078;3.82e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-27,76;UBERON:0001474,3.41e-25,82;UBERON:0002390,2.79e-23,98;UBERON:0003061,2.79e-23,98;UBERON:0004765,1.03e-22,90;UBERON:0002405,6.84e-22,93;UBERON:0002193,7.49e-21,108;UBERON:0001434,3.66e-20,100;UBERON:0003081,2.45e-12,203;UBERON:0002204,6.85e-11,167;UBERON:0006834,3.25e-09,1;UBERON:0002134,3.83e-09,1;UBERON:0005208,3.83e-09,1;UBERON:0005946,3.83e-09,1;UBERON:0005965,3.83e-09,1;UBERON:0002078,3.83e-09,1;UBERON:0000926,1.27e-07,315;UBERON:0004120,1.27e-07,315;UBERON:0006603,1.27e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,2.21598163412751,2.60707781711184,1.73608696572681,0,0,0,0,0,0,0.697287110717054,1.6446715520873,1.85823822537062,0,0.256160706529101,0,3.7922024881028,5.16387746867061,1.35426486594342,0.188242339542605,0.272906150057846,0,3.36692281607993,2.56743221660875,8.31138263538754,0.329851300186716,0,0,29.6013423401156,19.8584828641899,41.1062684337079,0,0,0.217188844705117,18.7673845816344,26.5159897911047,43.3553470794012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,1.58913877437726,0,0,0.201273793591026,0 | |||
|short_description=p15@RAP2C | |||
}} |
Latest revision as of 11:19, 19 September 2015
Short description: | p15@RAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAP2C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -161bp_to_uc004ewq.3, uc010nrk.2_5end |
EntrezGene: | RAP2C |
HGNC: | 21165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-52 | 42 |
defensive cell | 9.81e-46 | 48 |
phagocyte | 9.81e-46 | 48 |
myeloid leukocyte | 1.17e-36 | 72 |
monopoietic cell | 5.33e-36 | 59 |
monocyte | 5.33e-36 | 59 |
monoblast | 5.33e-36 | 59 |
promonocyte | 5.33e-36 | 59 |
macrophage dendritic cell progenitor | 9.64e-35 | 61 |
myeloid lineage restricted progenitor cell | 6.29e-32 | 66 |
granulocyte monocyte progenitor cell | 2.05e-31 | 67 |
myeloid cell | 1.81e-23 | 108 |
common myeloid progenitor | 1.81e-23 | 108 |
leukocyte | 3.96e-20 | 136 |
nongranular leukocyte | 2.12e-19 | 115 |
eosinophil | 8.24e-17 | 2 |
hematopoietic lineage restricted progenitor cell | 2.53e-16 | 120 |
hematopoietic stem cell | 1.17e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-14 | 161 |
hematopoietic cell | 1.09e-14 | 177 |
intermediate monocyte | 1.45e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.45e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-27 | 76 |
bone element | 3.41e-25 | 82 |
hematopoietic system | 2.79e-23 | 98 |
blood island | 2.79e-23 | 98 |
skeletal element | 1.03e-22 | 90 |
immune system | 6.84e-22 | 93 |
hemolymphoid system | 7.49e-21 | 108 |
skeletal system | 3.66e-20 | 100 |
lateral plate mesoderm | 2.45e-12 | 203 |
musculoskeletal system | 6.85e-11 | 167 |
uterus or analog | 3.25e-09 | 1 |
tricuspid valve | 3.83e-09 | 1 |
right atrium valve | 3.83e-09 | 1 |
outflow tract of atrium | 3.83e-09 | 1 |
outflow part of right atrium | 3.83e-09 | 1 |
right cardiac atrium | 3.83e-09 | 1 |
mesoderm | 1.27e-07 | 315 |
mesoderm-derived structure | 1.27e-07 | 315 |
presumptive mesoderm | 1.27e-07 | 315 |