FFCP PHASE1:Mm9::chr6:58856244..58856255,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:58856244..58856255,-|id=chr6:58856244..58856255,-|ontology_enrichment_celltype=CL:0000117!3.61e-13!23;CL:0000337!3.61e-13!23;CL:0000540!4.29e-08!33;CL:0000047!4.29e-08!33;CL:0000031!4.29e-08!33;CL:0000404!4.29e-08!33;CL:0002614!2.85e-07!3;CL:0002610!7.52e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,2.97e-23,23;CL:0000337,2.97e-23,23;CL:0002614,4.98e-22,3;CL:0002610,1.58e-20,3;CL:0000540,5.63e-16,33;CL:0000047,5.63e-16,33;CL:0000031,5.63e-16,33;CL:0000404,5.63e-16,33;CL:0000393,2.16e-13,39;CL:0000211,2.16e-13,39;CL:0002319,4.57e-12,43;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0002612,5.01e-10,3;CL:0002321,4.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.97e-25!52;UBERON:0005068!2.97e-25!52;UBERON:0006241!2.97e-25!52;UBERON:0007135!2.97e-25!52;UBERON:0002346!2.14e-23!71;UBERON:0003075!2.14e-23!71;UBERON:0007284!2.14e-23!71;UBERON:0001017!2.78e-23!73;UBERON:0005743!2.78e-23!73;UBERON:0000955!8.38e-23!50;UBERON:0006238!8.38e-23!50;UBERON:0000073!2.07e-22!75;UBERON:0001016!2.07e-22!75;UBERON:0002616!1.45e-21!49;UBERON:0000033!9.43e-21!63;UBERON:0004121!9.68e-20!102;UBERON:0000924!9.68e-20!102;UBERON:0006601!9.68e-20!102;UBERON:0002020!3.30e-19!34;UBERON:0003056!6.19e-14!49;UBERON:0003076!6.93e-14!12;UBERON:0003057!6.93e-14!12;UBERON:0003080!1.02e-13!40;UBERON:0007811!5.48e-13!86;UBERON:0002780!1.39e-12!39;UBERON:0001890!1.39e-12!39;UBERON:0006240!1.39e-12!39;UBERON:0002791!1.55e-12!29;UBERON:0003528!1.55e-12!29;UBERON:0001893!1.55e-12!29;UBERON:0002298!6.65e-12!6;UBERON:0002021!3.10e-11!10;UBERON:0000411!3.10e-11!10;UBERON:0001950!3.10e-11!10;UBERON:0000153!3.39e-11!94;UBERON:0002240!7.01e-11!6;UBERON:0005174!7.01e-11!6;UBERON:0001137!7.01e-11!6;UBERON:0001948!9.56e-10!5;UBERON:0002315!9.56e-10!5;UBERON:0002619!6.67e-09!17;UBERON:0002950!8.11e-09!4;UBERON:0001891!8.11e-09!4;UBERON:0009616!8.11e-09!4;UBERON:0000025!1.36e-08!114;UBERON:0000956!2.48e-08!21;UBERON:0001869!2.48e-08!21;UBERON:0000203!2.48e-08!21;UBERON:0004111!1.63e-07!122;UBERON:0002038!2.85e-07!3;UBERON:0002308!2.85e-07!3;UBERON:0009663!2.85e-07!3;UBERON:0009661!2.85e-07!3;UBERON:0006331!2.85e-07!3;UBERON:0000125!2.85e-07!3;UBERON:0004684!7.52e-07!3;UBERON:0002275!7.52e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.98e-22,3;UBERON:0009663,4.98e-22,3;UBERON:0009661,4.98e-22,3;UBERON:0000125,4.98e-22,3;UBERON:0002308,4.98e-22,3;UBERON:0004684,1.58e-20,3;UBERON:0002275,1.58e-20,3;UBERON:0000073,3.80e-20,54;UBERON:0002950,1.09e-16,4;UBERON:0001891,1.09e-16,4;UBERON:0009616,1.09e-16,4;UBERON:0010286,1.09e-16,4;UBERON:0002020,1.90e-15,34;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001948,8.81e-13,5;UBERON:0002315,8.81e-13,5;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002240,9.47e-11,6;UBERON:0005174,9.47e-11,6;UBERON:0001137,9.47e-11,6;UBERON:0002257,5.01e-10,3;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0002420,1.26e-08,8;UBERON:0007245,1.26e-08,8;UBERON:0010009,1.26e-08,8;UBERON:0010011,1.26e-08,8;UBERON:0000454,1.26e-08,8;UBERON:0010371,2.14e-08,73;UBERON:0003528,2.89e-08,29;UBERON:0002791,2.89e-08,29;UBERON:0001893,2.89e-08,29;UBERON:0002780,3.65e-08,39;UBERON:0001890,3.65e-08,39;UBERON:0006240,3.65e-08,39;UBERON:0003080,6.03e-08,40;UBERON:0002616,7.79e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,1.78762273319263,1.0752457327937,0.131886287730194,0,0,2.79182999001381,5.06486349028512,2.13917546887534,1.17851434189467,1.42371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.599162557619291,0,0.125654352112864,0.521472960576829,0.255715457330331,1.87009240103604,0.811206315338788,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr6:58856244..58856255,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:58856244..58856255,- | |||
|description=CAGE_peak_at_chr6:58856244..58856255,- | |||
|id=chr6:58856244..58856255,- | |||
|ontology_enrichment_celltype=CL:0000117!3.61e-13!23;CL:0000337!3.61e-13!23;CL:0000540!4.29e-08!33;CL:0000047!4.29e-08!33;CL:0000031!4.29e-08!33;CL:0000404!4.29e-08!33;CL:0002614!2.85e-07!3;CL:0002610!7.52e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.97e-23,23;CL:0000337,2.97e-23,23;CL:0002614,4.98e-22,3;CL:0002610,1.58e-20,3;CL:0000540,5.63e-16,33;CL:0000047,5.63e-16,33;CL:0000031,5.63e-16,33;CL:0000404,5.63e-16,33;CL:0000393,2.16e-13,39;CL:0000211,2.16e-13,39;CL:0002319,4.57e-12,43;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0002612,5.01e-10,3;CL:0002321,4.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-25!52;UBERON:0005068!2.97e-25!52;UBERON:0006241!2.97e-25!52;UBERON:0007135!2.97e-25!52;UBERON:0002346!2.14e-23!71;UBERON:0003075!2.14e-23!71;UBERON:0007284!2.14e-23!71;UBERON:0001017!2.78e-23!73;UBERON:0005743!2.78e-23!73;UBERON:0000955!8.38e-23!50;UBERON:0006238!8.38e-23!50;UBERON:0000073!2.07e-22!75;UBERON:0001016!2.07e-22!75;UBERON:0002616!1.45e-21!49;UBERON:0000033!9.43e-21!63;UBERON:0004121!9.68e-20!102;UBERON:0000924!9.68e-20!102;UBERON:0006601!9.68e-20!102;UBERON:0002020!3.30e-19!34;UBERON:0003056!6.19e-14!49;UBERON:0003076!6.93e-14!12;UBERON:0003057!6.93e-14!12;UBERON:0003080!1.02e-13!40;UBERON:0007811!5.48e-13!86;UBERON:0002780!1.39e-12!39;UBERON:0001890!1.39e-12!39;UBERON:0006240!1.39e-12!39;UBERON:0002791!1.55e-12!29;UBERON:0003528!1.55e-12!29;UBERON:0001893!1.55e-12!29;UBERON:0002298!6.65e-12!6;UBERON:0002021!3.10e-11!10;UBERON:0000411!3.10e-11!10;UBERON:0001950!3.10e-11!10;UBERON:0000153!3.39e-11!94;UBERON:0002240!7.01e-11!6;UBERON:0005174!7.01e-11!6;UBERON:0001137!7.01e-11!6;UBERON:0001948!9.56e-10!5;UBERON:0002315!9.56e-10!5;UBERON:0002619!6.67e-09!17;UBERON:0002950!8.11e-09!4;UBERON:0001891!8.11e-09!4;UBERON:0009616!8.11e-09!4;UBERON:0000025!1.36e-08!114;UBERON:0000956!2.48e-08!21;UBERON:0001869!2.48e-08!21;UBERON:0000203!2.48e-08!21;UBERON:0004111!1.63e-07!122;UBERON:0002038!2.85e-07!3;UBERON:0002308!2.85e-07!3;UBERON:0009663!2.85e-07!3;UBERON:0009661!2.85e-07!3;UBERON:0006331!2.85e-07!3;UBERON:0000125!2.85e-07!3;UBERON:0004684!7.52e-07!3;UBERON:0002275!7.52e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.98e-22,3;UBERON:0009663,4.98e-22,3;UBERON:0009661,4.98e-22,3;UBERON:0000125,4.98e-22,3;UBERON:0002308,4.98e-22,3;UBERON:0004684,1.58e-20,3;UBERON:0002275,1.58e-20,3;UBERON:0000073,3.80e-20,54;UBERON:0002950,1.09e-16,4;UBERON:0001891,1.09e-16,4;UBERON:0009616,1.09e-16,4;UBERON:0010286,1.09e-16,4;UBERON:0002020,1.90e-15,34;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001948,8.81e-13,5;UBERON:0002315,8.81e-13,5;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002240,9.47e-11,6;UBERON:0005174,9.47e-11,6;UBERON:0001137,9.47e-11,6;UBERON:0002257,5.01e-10,3;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0002420,1.26e-08,8;UBERON:0007245,1.26e-08,8;UBERON:0010009,1.26e-08,8;UBERON:0010011,1.26e-08,8;UBERON:0000454,1.26e-08,8;UBERON:0010371,2.14e-08,73;UBERON:0003528,2.89e-08,29;UBERON:0002791,2.89e-08,29;UBERON:0001893,2.89e-08,29;UBERON:0002780,3.65e-08,39;UBERON:0001890,3.65e-08,39;UBERON:0006240,3.65e-08,39;UBERON:0003080,6.03e-08,40;UBERON:0002616,7.79e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,1.78762273319263,1.0752457327937,0.131886287730194,0,0,2.79182999001381,5.06486349028512,2.13917546887534,1.17851434189467,1.42371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.599162557619291,0,0.125654352112864,0.521472960576829,0.255715457330331,1.87009240103604,0.811206315338788,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:58856244..58856255,- | |||
}} |
Latest revision as of 00:17, 6 August 2015
Short description: | p@chr6:58856244..58856255, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:58856244..58856255, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.97e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.97e-23 | 23 |
neuron of the substantia nigra | 4.98e-22 | 3 |
raphe nuclei neuron | 1.58e-20 | 3 |
neuron | 5.63e-16 | 33 |
neuronal stem cell | 5.63e-16 | 33 |
neuroblast | 5.63e-16 | 33 |
electrically signaling cell | 5.63e-16 | 33 |
electrically responsive cell | 2.16e-13 | 39 |
electrically active cell | 2.16e-13 | 39 |
neural cell | 4.57e-12 | 43 |
ectodermal cell | 8.98e-12 | 44 |
neurectodermal cell | 8.98e-12 | 44 |
neuron of the ventral spinal cord | 5.01e-10 | 3 |
embryonic cell | 4.67e-07 | 70 |