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FFCP PHASE1:Mm9::chr6:56664952..56664965,+: Difference between revisions

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{{FFCP|EntrezGene=78937|HGNC=|MCL_coexpression_id=318|UniProt=Q80U56|association_with_transcript=53bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end|description=CAGE_peak_4_at_Avl9_5end|id=chr6:56664952..56664965,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,2.12e-09,9;CL:0000789,2.12e-09,9;CL:0002420,2.12e-09,9;CL:0002419,2.12e-09,9;CL:0000790,2.12e-09,9;CL:0000838,8.14e-09,12;CL:0000624,5.36e-08,8;CL:0000542,5.41e-08,13;CL:0000051,5.41e-08,13;CL:0000084,2.04e-07,11;CL:0000827,2.04e-07,11;CL:0000988,4.09e-07,32;CL:0002032,4.09e-07,32;CL:0000037,4.09e-07,32;CL:0000837,4.09e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.96e-08,23;UBERON:0000974,2.96e-08,23;UBERON:0004807,2.96e-08,23;UBERON:0005058,2.96e-08,23;UBERON:0003351,2.96e-08,23;UBERON:0009113,2.96e-08,23;UBERON:0003295,2.96e-08,23;UBERON:0009722,2.96e-08,23;UBERON:0005562,2.96e-08,23;UBERON:0007690,2.96e-08,23;UBERON:0006562,8.76e-08,24;UBERON:0003408,8.76e-08,24;UBERON:0001557,8.76e-08,24;UBERON:0001042,8.76e-08,24;UBERON:0008814,8.76e-08,24;UBERON:0009145,8.76e-08,24|phase1_expression=0.320297694209588,0.348975407639361,1.81999695755814,0.30246421130683,1.50268718983904,1.34303417529512,0.467225281191051,3.87369970324729,5.490760163915,5.85161315804984,0,0.239316476986009,4.28001824828014,4.19617931611188,0,0.404950534779652,0,1.26184866143295,0.411343300817216,1.69755860719212,0.595303031057488,0.297872853602656,0.522399578277871,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.866554859253824,0.664938581433969,1.02084678131185,3.34825304589526,1.5626706890476,2.09409497589519,5.88231488031014,6.83045484958446,4.36959317728038,0.125896817975577,0.709638518536602,0.183546752161682,0,0,0.219686182734472,0,0,0,6.37573903019398,6.5282592781021,3.6970317905671,0.514518872071894,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0.988866362566974,0,0,0,1.45165457231869,0.405017814995072,0.630974884054146,0.285650984403804,0.883474163806454,0.734944795289724,0.670918297127655,0,0,0.766124028511126,0.307213066512487,0.527545150920775,0.731901148819277,1.04182674111352,0.837548997004143,1.12552522006336,0.763991238884051,0.883885756421003,1.56608848879013,0.559198337475902,0.302904773332736,0.151143120213571,4.63783181922684,1.72084775396277,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.5709193985953,2.07150306917737,0.445326417194474,0.346970653532272,0,0.461230994512117,0.452167921657868,0.587943535678524,0.376999773989026,1.23597483867187,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0.766371165625774,1.43778149407104,1.79970819298022,1.27070227073065,0.449371918214468,0,1.50785222535437,0.695297280769106,1.53429274398198,0.83115217823824,0.811206315338788,0.916554274652847,0.373220911830279,1.51633655060205,0.420883711772948,0.260240885925407,0,0.180062129805349,0.60281927134286,0.544291993210623,0.512454881139399,0.281105173679186,1.29351685369508,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,1.02939162845886,0.284163499395593,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.467061369468678,0.329119699826961,0,0.324275238183423,0.438599962275997,0.439100230582101,0.134206418760372,0.630869845692382,0.411618449517138,0.330418782983798,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,0.754005626400808,0.596869416123452,0.779856348476481,0,0.432276099749388,1.39398891278057,0.189667900953082,0,0,0,0.387904974335251,0.631222379012867,0.379419222745544,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.358794827043824,0,1.10851914099963,0.37898282354097,0.488894929326078,0,0,0.502518772325447,0.714130922658041,0.975668239288994,0.472905432318573,0.8858587585951,0.956728611944923,0.327726629431476,1.20879487306127,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.703270119553219,0.491804836130026,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0,0.963963949265421,0.283880170416537,0.534196811001766,1.30309567482861,0.989820737835213,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0.428674070063185,0.886701168211368,0.178368817602071,0.329098041204242,0.913394847343798,0.469343416127421,0.63549621259146,0.220528398054962,0,0,0.241251699712623,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,5.26933132980952,3.35883485576779,5.8043988997858,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0.129159823477731,0,0.352071715937262,0.781226309063701,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.205421914329655,1.03936658382236,1.07416017400489,1.98681354781265,1.44234539423963,1.03382669022204,1.11063094942962,1.06689529317,1.20991422164209,1.16949456887703,0.865906574762965,0.701261413089414,0.453460767230423,0,0.269141569828427,0.503653849092235,0.772758376128762,0.750729901804728,0.183151624267265,1.07184189539533,1.00314420807073,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.861532034334199,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.749431733813838,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p4@Avl9}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78937
|HGNC=
|MCL_coexpression_id=318
|TSSclassifier=NA
|UniProt=Q80U56
|association_with_transcript=53bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end
|cluster_id=chr6:56664952..56664965,+
|description=CAGE_peak_4_at_Avl9_5end
|id=chr6:56664952..56664965,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,2.12e-09,9;CL:0000789,2.12e-09,9;CL:0002420,2.12e-09,9;CL:0002419,2.12e-09,9;CL:0000790,2.12e-09,9;CL:0000838,8.14e-09,12;CL:0000624,5.36e-08,8;CL:0000542,5.41e-08,13;CL:0000051,5.41e-08,13;CL:0000084,2.04e-07,11;CL:0000827,2.04e-07,11;CL:0000988,4.09e-07,32;CL:0002032,4.09e-07,32;CL:0000037,4.09e-07,32;CL:0000837,4.09e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.96e-08,23;UBERON:0000974,2.96e-08,23;UBERON:0004807,2.96e-08,23;UBERON:0005058,2.96e-08,23;UBERON:0003351,2.96e-08,23;UBERON:0009113,2.96e-08,23;UBERON:0003295,2.96e-08,23;UBERON:0009722,2.96e-08,23;UBERON:0005562,2.96e-08,23;UBERON:0007690,2.96e-08,23;UBERON:0006562,8.76e-08,24;UBERON:0003408,8.76e-08,24;UBERON:0001557,8.76e-08,24;UBERON:0001042,8.76e-08,24;UBERON:0008814,8.76e-08,24;UBERON:0009145,8.76e-08,24
|phase1_expression=0.320297694209588,0.348975407639361,1.81999695755814,0.30246421130683,1.50268718983904,1.34303417529512,0.467225281191051,3.87369970324729,5.490760163915,5.85161315804984,0,0.239316476986009,4.28001824828014,4.19617931611188,0,0.404950534779652,0,1.26184866143295,0.411343300817216,1.69755860719212,0.595303031057488,0.297872853602656,0.522399578277871,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.866554859253824,0.664938581433969,1.02084678131185,3.34825304589526,1.5626706890476,2.09409497589519,5.88231488031014,6.83045484958446,4.36959317728038,0.125896817975577,0.709638518536602,0.183546752161682,0,0,0.219686182734472,0,0,0,6.37573903019398,6.5282592781021,3.6970317905671,0.514518872071894,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0.988866362566974,0,0,0,1.45165457231869,0.405017814995072,0.630974884054146,0.285650984403804,0.883474163806454,0.734944795289724,0.670918297127655,0,0,0.766124028511126,0.307213066512487,0.527545150920775,0.731901148819277,1.04182674111352,0.837548997004143,1.12552522006336,0.763991238884051,0.883885756421003,1.56608848879013,0.559198337475902,0.302904773332736,0.151143120213571,4.63783181922684,1.72084775396277,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.5709193985953,2.07150306917737,0.445326417194474,0.346970653532272,0,0.461230994512117,0.452167921657868,0.587943535678524,0.376999773989026,1.23597483867187,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0.766371165625774,1.43778149407104,1.79970819298022,1.27070227073065,0.449371918214468,0,1.50785222535437,0.695297280769106,1.53429274398198,0.83115217823824,0.811206315338788,0.916554274652847,0.373220911830279,1.51633655060205,0.420883711772948,0.260240885925407,0,0.180062129805349,0.60281927134286,0.544291993210623,0.512454881139399,0.281105173679186,1.29351685369508,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,1.02939162845886,0.284163499395593,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.467061369468678,0.329119699826961,0,0.324275238183423,0.438599962275997,0.439100230582101,0.134206418760372,0.630869845692382,0.411618449517138,0.330418782983798,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,0.754005626400808,0.596869416123452,0.779856348476481,0,0.432276099749388,1.39398891278057,0.189667900953082,0,0,0,0.387904974335251,0.631222379012867,0.379419222745544,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0,0,0,0,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.358794827043824,0,1.10851914099963,0.37898282354097,0.488894929326078,0,0,0.502518772325447,0.714130922658041,0.975668239288994,0.472905432318573,0.8858587585951,0.956728611944923,0.327726629431476,1.20879487306127,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.703270119553219,0.491804836130026,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0,0.963963949265421,0.283880170416537,0.534196811001766,1.30309567482861,0.989820737835213,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0.428674070063185,0.886701168211368,0.178368817602071,0.329098041204242,0.913394847343798,0.469343416127421,0.63549621259146,0.220528398054962,0,0,0.241251699712623,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,5.26933132980952,3.35883485576779,5.8043988997858,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0.129159823477731,0,0.352071715937262,0.781226309063701,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.205421914329655,1.03936658382236,1.07416017400489,1.98681354781265,1.44234539423963,1.03382669022204,1.11063094942962,1.06689529317,1.20991422164209,1.16949456887703,0.865906574762965,0.701261413089414,0.453460767230423,0,0.269141569828427,0.503653849092235,0.772758376128762,0.750729901804728,0.183151624267265,1.07184189539533,1.00314420807073,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0,0.320919209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|short_description=p4@Avl9
}}

Latest revision as of 14:27, 1 October 2015

Short description:p4@Avl9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Avl9_5end
Coexpression cluster:MCL_coexpression_mm9:318
Association with transcript: 53bp_to_ENSMUST00000031805, NM_030235, uc009cbk.2, uc009cbl.2_5end
EntrezGene:Avl9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Avl9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus2.96e-0823
neck2.96e-0823
respiratory system epithelium2.96e-0823
hemolymphoid system gland2.96e-0823
pharyngeal epithelium2.96e-0823
thymic region2.96e-0823
pharyngeal gland2.96e-0823
entire pharyngeal arch endoderm2.96e-0823
thymus primordium2.96e-0823
early pharyngeal endoderm2.96e-0823
pharynx8.76e-0824
gland of gut8.76e-0824
upper respiratory tract8.76e-0824
chordate pharynx8.76e-0824
pharyngeal arch system8.76e-0824
pharyngeal region of foregut8.76e-0824
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