FFCP PHASE1:Hg19::chr9:74764278..74764289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4212 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2T3,E9PBR2,Q5SZC6 | |||
|association_with_transcript=-3bp_to_ENST00000238018,ENST00000376989,uc004aiq.2,uc004air.2,uc004ais.2,uc010mow.1,uc011lsf.1_5end | |||
|cluster_id=chr9:74764278..74764289,+ | |||
|coexpression_cluster_id=C2946 | |||
|description=CAGE_peak_4_at_GDA_5end | |||
|id=chr9:74764278..74764289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.20e-08;6!CL:0002255;1.20e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,8.87e-09,6;CL:0002255,8.87e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.97e-09;29 | |||
|ontology_enrichment_disease=DOID:305!2.07e-17!106;DOID:299!3.09e-15!25;DOID:0050687!4.11e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:299;1.68e-10;25!DOID:3001;1.20e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.53e-16,106;DOID:299,1.44e-10,25;DOID:0050687,6.70e-10,143;DOID:3001,8.87e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.69e-30!22;UBERON:0001869!2.04e-29!32;UBERON:0002780!2.43e-29!41;UBERON:0001890!2.43e-29!41;UBERON:0006240!2.43e-29!41;UBERON:0001893!4.26e-29!34;UBERON:0002020!1.22e-28!34;UBERON:0003528!1.22e-28!34;UBERON:0003080!2.19e-28!42;UBERON:0002791!7.28e-28!33;UBERON:0001950!7.90e-28!20;UBERON:0000956!5.26e-26!25;UBERON:0000203!5.26e-26!25;UBERON:0001049!9.53e-25!57;UBERON:0005068!9.53e-25!57;UBERON:0006241!9.53e-25!57;UBERON:0007135!9.53e-25!57;UBERON:0007023!5.65e-21!115;UBERON:0002616!8.18e-21!59;UBERON:0000955!1.43e-19!69;UBERON:0006238!1.43e-19!69;UBERON:0001017!8.87e-18!82;UBERON:0005743!2.24e-16!86;UBERON:0003056!2.85e-16!61;UBERON:0000073!4.44e-16!94;UBERON:0001016!4.44e-16!94;UBERON:0002346!3.65e-14!90;UBERON:0000160!1.22e-13!27;UBERON:0003075!1.50e-13!86;UBERON:0007284!1.50e-13!86;UBERON:0005409!3.11e-13!35;UBERON:0001737!1.02e-12!9;UBERON:0002108!3.17e-12!14;UBERON:0000062!3.68e-12!511;UBERON:0004921!8.08e-12!129;UBERON:0004185!8.08e-12!129;UBERON:0000481!9.96e-12!347;UBERON:0001871!1.20e-11!7;UBERON:0001007!7.40e-11!155;UBERON:0001555!7.40e-11!155;UBERON:0007026!7.40e-11!155;UBERON:0004119!2.24e-10!169;UBERON:0000925!2.24e-10!169;UBERON:0006595!2.24e-10!169;UBERON:0002114!5.37e-10!12;UBERON:0000064!9.45e-10!219;UBERON:0000200!2.69e-09!6;UBERON:0002075!3.18e-09!18;UBERON:0002050!9.94e-09!605;UBERON:0005423!9.94e-09!605;UBERON:0000033!1.64e-08!123;UBERON:0000349!1.85e-08!5;UBERON:0000077!2.36e-08!130;UBERON:0000923!2.49e-08!604;UBERON:0005291!2.49e-08!604;UBERON:0006598!2.49e-08!604;UBERON:0002532!2.49e-08!604;UBERON:0000922!3.04e-08!612;UBERON:0001557!3.91e-08!19;UBERON:0001872!8.97e-08!5;UBERON:0000153!1.26e-07!129;UBERON:0007811!1.26e-07!129;UBERON:0002021!1.44e-07!5;UBERON:0000467!1.94e-07!625;UBERON:0000480!2.25e-07!626;UBERON:0000468!2.61e-07!659;UBERON:0000477!2.96e-07!286;UBERON:0000025!6.12e-07!194;UBERON:0001264!7.04e-07!10;UBERON:0003922!7.04e-07!10;UBERON:0003923!7.04e-07!10;UBERON:0003924!7.04e-07!10;UBERON:0003921!7.04e-07!10;UBERON:0001041!7.19e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.29e-47;22!UBERON:0001950;3.60e-43;20!UBERON:0000956;4.35e-41;25!UBERON:0000203;4.35e-41;25!UBERON:0001869;1.72e-39;32!UBERON:0002791;8.36e-37;32!UBERON:0001893;1.97e-35;34!UBERON:0003528;2.29e-33;34!UBERON:0002020;2.29e-33;34!UBERON:0002780;6.47e-24;41!UBERON:0001890;6.47e-24;41!UBERON:0001737;2.56e-19;9!UBERON:0001557;2.56e-19;9!UBERON:0001871;1.11e-15;6!UBERON:0000200;8.83e-14;6!UBERON:0000073;9.76e-14;53!UBERON:0002616;9.76e-14;53!UBERON:0000349;1.93e-12;5!UBERON:0001872;2.80e-11;5!UBERON:0002021;4.13e-11;5!UBERON:0000955;8.57e-11;68!UBERON:0002108;9.95e-11;4!UBERON:0001017;4.79e-10;75!UBERON:0001870;8.09e-08;3!UBERON:0002075;1.92e-07;18!UBERON:0001016;5.29e-07;83!UBERON:0002114;5.95e-07;2!UBERON:0002420;7.33e-07;9!UBERON:0007245;7.33e-07;9!UBERON:0010009;7.33e-07;9!UBERON:0010011;7.33e-07;9!UBERON:0000454;7.33e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.67e-47,22;UBERON:0001869,2.16e-44,32;UBERON:0001950,2.96e-43,20;UBERON:0001893,2.23e-41,34;UBERON:0000956,3.30e-41,25;UBERON:0000203,3.30e-41,25;UBERON:0002791,6.84e-41,32;UBERON:0003528,4.25e-38,34;UBERON:0002020,4.25e-38,34;UBERON:0002780,4.20e-33,41;UBERON:0001890,4.20e-33,41;UBERON:0003080,4.20e-33,41;UBERON:0006240,4.20e-33,41;UBERON:0000073,5.96e-24,53;UBERON:0002616,5.96e-24,53;UBERON:0001049,2.83e-22,56;UBERON:0005068,2.83e-22,56;UBERON:0006241,2.83e-22,56;UBERON:0007135,2.83e-22,56;UBERON:0000955,2.45e-21,68;UBERON:0006238,2.45e-21,68;UBERON:0011216,1.66e-20,223;UBERON:0003056,7.59e-20,61;UBERON:0001737,3.14e-19,9;UBERON:0001017,3.89e-18,81;UBERON:0001871,1.12e-15,6;UBERON:0001016,1.62e-15,89;UBERON:0000200,8.28e-14,6;UBERON:0003075,6.38e-13,82;UBERON:0007284,6.38e-13,82;UBERON:0000349,1.74e-12,5;UBERON:0007023,4.44e-12,114;UBERON:0002346,5.38e-12,86;UBERON:0001872,2.11e-11,5;UBERON:0002021,4.46e-11,5;UBERON:0002108,1.02e-10,4;UBERON:0010371,9.39e-09,104;UBERON:0001557,4.04e-08,19;UBERON:0001870,7.91e-08,3;UBERON:0010314,1.32e-07,132;UBERON:0002075,1.82e-07,18;UBERON:0000025,2.25e-07,192;UBERON:0004921,4.07e-07,118;UBERON:0001007,4.44e-07,145;UBERON:0001555,4.44e-07,145;UBERON:0007026,4.44e-07,145;UBERON:0002114,5.77e-07,2;UBERON:0002420,7.39e-07,9;UBERON:0007245,7.39e-07,9;UBERON:0010009,7.39e-07,9;UBERON:0010011,7.39e-07,9;UBERON:0000454,7.39e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32380600179297,3.37169380156203,4.33819853790268,5.84558055481688,2.61455332910887,3.55905928666645,4.04493924480493,3.53198637225623,6.92544882503503,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,1.06461206063404,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.23874448473769,0,0,11.9297717731956,12.2382392277146,0,0,0,0.19924798825107,0,0,0,0,0,2.60618218327248,0,0,0.0986434056369336,0,0,2.90799823828566,4.63840490809256,1.99613798001194,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,6.87399700164825,0,0,0,7.45910350323507,3.59496929612668,10.3173570766166,0,0,0,0,0,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,9.46750287323057,0.141353071433941,0,0.995261931078505,1.41532103205343,2.4441205797345,0,0,0,0.337005664903385,0,0.702793337176017,0,0.586993856796269,0,2.76209081994573,1.20990716048664,1.53036380815245,0,0,0,7.97584647248622,8.60579085276297,6.90652420495896,14.3366915727551,2.84609546029793,0,6.42171031839984,1.17590876897253,0,0,0,5.99889253992328,8.47836078199752,7.47250659184204,0,0,0,0,0,5.9512148198526,9.58201775400535,0.400794101257669,2.98834192635094,15.1855303282419,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.08270229666224,0,4.77137813885582,6.94637371169036,0,0,0,0,0,6.56095211906666,4.36065093879046,2.91581117007033,0.262272940674991,0,19.7216073266129,5.37362552494447,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0.129282956361551,0.66116300871345,0,1.40963004463334,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,7.97461361970287,7.56562842392172,3.254964198369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56252839300712,0,0,0,0,0.245772908753719,6.33936370075881,0,0,0,0,0,0.559518030877778,0,0,0,0.157265941855896,0,0,0.637724760305049,0,0,0,0,0,0,0,4.56027498184863,4.25089728976755,2.55414174491442,9.64046911931549,1.76450187355203,2.21303207885497,8.39673357285626,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,14.0843849058683,1.6264169483875,4.72763092328763,5.46754669029693,5.37385670903079,4.94643319512473,1.64092442705466,0,0,0.527613733078862,9.45441964533005,0,0,0.606965604236632,0.227662191351298,0.709618961301111,0,0,0.475788130837822,3.68327531951955,0,0,0.078493092850514,10.3696289344561,8.68843706272746,0.913158720509496,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,1.3746412112643,1.86123831398592,1.91107787795487,0.894843454382338,0.294450700845729,0.243835849964539,0,0.307988420568741,0,0,0,0,0,0,0,0,4.78479780269257,2.18559560503957,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,1.78553938605658,0,0,0.730336388246517,0,0,0,4.82739580355494,2.61810414204226,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,1.56984607612859,0,0,0.217716747896961,0.342233301085281,0.134704106029175,0.430333232356058,0,2.36069478971826,0.213454691755431,0,12.0365770822826,0,0.244482888365733,1.62758471326295,0,0,0 | |||
|short_description=p4@GDA | |||
}} |
Latest revision as of 19:31, 17 September 2015
Short description: | p4@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GDA_5end |
Coexpression cluster: | C2946_large_tubular_gastric_papillary_embryonic_small_cervical |
Association with transcript: | -3bp_to_ENST00000238018, ENST00000376989, uc004aiq.2, uc004air.2, uc004ais.2, uc010mow.1, uc011lsf.1_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | Q9Y2T3E9PBR2Q5SZC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 8.87e-09 | 6 |
stromal cell of endometrium | 8.87e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.53e-16 | 106 |
adenocarcinoma | 1.44e-10 | 25 |
cell type cancer | 6.70e-10 | 143 |
female reproductive endometrioid cancer | 8.87e-09 | 6 |