FFCP PHASE1:Mm9::chr6:115709022..115709038,-: Difference between revisions
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{{FFCP|EntrezGene=94346|HGNC=|MCL_coexpression_id=3|UniProt=Q4FJU9|association_with_transcript=-5bp_to_ENSMUST00000072933,NM_144805,uc009dja.2_5end|description=CAGE_peak_4_at_Tmem40_5end|id=chr6:115709022..115709038,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.45e-08,6;DOID:0060100,2.99e-07,3;DOID:4045,2.99e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.37e-09,5;UBERON:0001003,6.37e-09,5;UBERON:0002097,6.37e-09,5;UBERON:0002199,6.37e-09,5;UBERON:0007029,6.37e-09,5;UBERON:0007376,6.37e-09,5;UBERON:0002416,6.37e-09,5;UBERON:0007383,6.37e-09,5;UBERON:0003102,2.23e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,3.81018404075779,2.46025915033828,0,0,0,0,17.996860121687,21.8773896466664,23.5585684788209,13.5293242247133,21.1744100337118,15.0508209439658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.52015919285059,2.02209778005913,0.22836775943812,0,0,0.693941307064543,1.21786191324856,0,0,0.117588707135705,0,0,0.144599356919912,0,0.970601099684455,1.10420759230197,0,0,0,0,0,2.75574786363617,2.39961092397363,3.55796635804581,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,1.0447564995665,2.05782136407943,0,0,3.08817488537658,1.42081749697796,0.207125772535502,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.50160595144485,2.16214894624523,2.24862112384854,3.65148218499305,3.37648023653384,5.60176873919124,0.863088412352432,2.7562988551756,1.64736847912849,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,2.63818004706368,1.77610869365496,1.74907482291652,2.50681922406587,3.44695889464629,0,0,1.19609616558497,0.82554747185289,3.51869602002452,0.941842285023455,1.91371918809435,1.37266903923914,7.47905091972963,5.45810664062266,5.2515990045681,0.954670618015114,0,0.203319467126849,0.432021363287205,1.04544148007234,0.218362563746178,1.07891477107857,1.40510874733071,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0.129920822977795,0,0.198681354781265,0.360586348559907,0.295379054349154,0,0.0762068066549998,0,0,0,0,3.85441652145859,0,0,0,1.73870634628971,0.750729901804728,0.549454872801795,4.50173596066038,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.729320151204882,1.04806581313991,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.89635213366817,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.564656282491984,0.507687647350059,0.365855945745545,1.05227884575137,0.135804113845862,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,0.644613162144895,0.956441660344217,0.882365676478062,0.231867835620421|short_description=p4@Tmem40}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94346 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q4FJU9 | |||
|association_with_transcript=-5bp_to_ENSMUST00000072933,NM_144805,uc009dja.2_5end | |||
|cluster_id=chr6:115709022..115709038,- | |||
|description=CAGE_peak_4_at_Tmem40_5end | |||
|id=chr6:115709022..115709038,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.45e-08,6;DOID:0060100,2.99e-07,3;DOID:4045,2.99e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.37e-09,5;UBERON:0001003,6.37e-09,5;UBERON:0002097,6.37e-09,5;UBERON:0002199,6.37e-09,5;UBERON:0007029,6.37e-09,5;UBERON:0007376,6.37e-09,5;UBERON:0002416,6.37e-09,5;UBERON:0007383,6.37e-09,5;UBERON:0003102,2.23e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,3.81018404075779,2.46025915033828,0,0,0,0,17.996860121687,21.8773896466664,23.5585684788209,13.5293242247133,21.1744100337118,15.0508209439658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.52015919285059,2.02209778005913,0.22836775943812,0,0,0.693941307064543,1.21786191324856,0,0,0.117588707135705,0,0,0.144599356919912,0,0.970601099684455,1.10420759230197,0,0,0,0,0,2.75574786363617,2.39961092397363,3.55796635804581,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,1.0447564995665,2.05782136407943,0,0,3.08817488537658,1.42081749697796,0.207125772535502,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.50160595144485,2.16214894624523,2.24862112384854,3.65148218499305,3.37648023653384,5.60176873919124,0.863088412352432,2.7562988551756,1.64736847912849,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,2.63818004706368,1.77610869365496,1.74907482291652,2.50681922406587,3.44695889464629,0,0,1.19609616558497,0.82554747185289,3.51869602002452,0.941842285023455,1.91371918809435,1.37266903923914,7.47905091972963,5.45810664062266,5.2515990045681,0.954670618015114,0,0.203319467126849,0.432021363287205,1.04544148007234,0.218362563746178,1.07891477107857,1.40510874733071,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0.129920822977795,0,0.198681354781265,0.360586348559907,0.295379054349154,0,0.0762068066549998,0,0,0,0,3.85441652145859,0,0,0,1.73870634628971,0.750729901804728,0.549454872801795,4.50173596066038,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.729320151204882,1.04806581313991,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.89635213366817,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.564656282491984,0.507687647350059,0.365855945745545,1.05227884575137,0.135804113845862,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,0.644613162144895,0.956441660344217,0.882365676478062,0.231867835620421 | |||
|short_description=p4@Tmem40 | |||
}} |
Latest revision as of 12:06, 26 September 2015
Short description: | p4@Tmem40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmem40_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -5bp_to_ENSMUST00000072933, NM_144805, uc009dja.2_5end |
EntrezGene: | Tmem40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.37e-09 | 5 |
skin epidermis | 6.37e-09 | 5 |
skin of body | 6.37e-09 | 5 |
integument | 6.37e-09 | 5 |
surface | 6.37e-09 | 5 |
outer epithelium | 6.37e-09 | 5 |
integumental system | 6.37e-09 | 5 |
enveloping layer of ectoderm | 6.37e-09 | 5 |
surface structure | 2.23e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.45e-08 | 6 |
musculoskeletal system cancer | 2.99e-07 | 3 |
muscle cancer | 2.99e-07 | 3 |