FFCP PHASE1:Mm9::chr6:103460902..103460911,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12661|HGNC=|MCL_coexpression_id=1203|UniProt=E9QMU6,A2RRK1,E9QL95,P70232|association_with_transcript=32bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end|description=CAGE_peak_11_at_Chl1_5end|id=chr6:103460902..103460911,+|ontology_enrichment_celltype=CL:0000540!1.38e-23!33;CL:0000047!1.38e-23!33;CL:0000031!1.38e-23!33;CL:0000404!1.38e-23!33;CL:0000393!3.79e-18!39;CL:0000211!3.79e-18!39;CL:0002319!6.40e-18!43;CL:0000117!1.80e-17!23;CL:0000337!1.80e-17!23;CL:0000221!3.07e-17!44;CL:0000133!3.07e-17!44;CL:0000055!9.13e-14!50;CL:0000107!3.16e-08!9;CL:0002321!7.66e-07!70;CL:0000220!7.66e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,8.93e-28,33;CL:0000047,8.93e-28,33;CL:0000031,8.93e-28,33;CL:0000404,8.93e-28,33;CL:0002319,4.23e-23,43;CL:0000393,6.32e-23,39;CL:0000211,6.32e-23,39;CL:0000221,1.74e-22,44;CL:0000133,1.74e-22,44;CL:0000117,2.79e-21,23;CL:0000337,2.79e-21,23;CL:0002321,1.16e-12,70;CL:0002613,3.39e-11,3;CL:0000120,3.56e-10,3;CL:0000107,2.17e-08,9;CL:0000723,1.10e-07,91;CL:0000048,1.10e-07,91;CL:0000034,5.57e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.31e-24!75;UBERON:0001016!7.31e-24!75;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0004121!5.55e-17!102;UBERON:0000924!5.55e-17!102;UBERON:0006601!5.55e-17!102;UBERON:0001049!1.63e-15!52;UBERON:0005068!1.63e-15!52;UBERON:0006241!1.63e-15!52;UBERON:0007135!1.63e-15!52;UBERON:0002020!7.16e-15!34;UBERON:0002346!2.01e-13!71;UBERON:0003075!2.01e-13!71;UBERON:0007284!2.01e-13!71;UBERON:0002616!3.66e-12!49;UBERON:0000955!1.04e-11!50;UBERON:0006238!1.04e-11!50;UBERON:0002791!7.15e-11!29;UBERON:0003528!7.15e-11!29;UBERON:0001893!7.15e-11!29;UBERON:0003080!1.25e-09!40;UBERON:0000010!2.46e-09!11;UBERON:0000033!5.01e-09!63;UBERON:0002780!6.28e-09!39;UBERON:0001890!6.28e-09!39;UBERON:0006240!6.28e-09!39;UBERON:0003056!2.77e-08!49;UBERON:0002410!3.16e-08!9;UBERON:0007811!5.72e-08!86;UBERON:0003076!2.37e-07!12;UBERON:0003057!2.37e-07!12;UBERON:0000153!2.87e-07!94;UBERON:0002420!6.62e-07!8;UBERON:0007245!6.62e-07!8;UBERON:0010009!6.62e-07!8;UBERON:0010011!6.62e-07!8;UBERON:0000454!6.62e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.09e-21,75;UBERON:0001017,2.65e-20,73;UBERON:0004121,4.08e-16,95;UBERON:0000924,4.08e-16,95;UBERON:0006601,4.08e-16,95;UBERON:0002420,1.63e-14,8;UBERON:0007245,1.63e-14,8;UBERON:0010009,1.63e-14,8;UBERON:0010011,1.63e-14,8;UBERON:0000454,1.63e-14,8;UBERON:0000073,1.13e-11,54;UBERON:0000369,1.81e-11,5;UBERON:0002435,1.81e-11,5;UBERON:0000204,1.81e-11,5;UBERON:0010082,1.81e-11,5;UBERON:0002020,3.07e-11,34;UBERON:0001049,1.52e-10,52;UBERON:0005068,1.52e-10,52;UBERON:0006241,1.52e-10,52;UBERON:0007135,1.52e-10,52;UBERON:0000011,3.32e-10,3;UBERON:0000010,1.00e-09,11;UBERON:0002346,3.17e-09,64;UBERON:0003075,3.17e-09,64;UBERON:0007284,3.17e-09,64;UBERON:0002410,2.17e-08,9;UBERON:0010371,1.09e-07,73;UBERON:0003080,1.60e-07,40;UBERON:0002616,1.72e-07,46;UBERON:0003528,1.82e-07,29;UBERON:0002791,1.82e-07,29;UBERON:0001893,1.82e-07,29;UBERON:0002950,2.64e-07,4;UBERON:0001891,2.64e-07,4;UBERON:0009616,2.64e-07,4;UBERON:0010286,2.64e-07,4;UBERON:0000955,2.77e-07,47;UBERON:0006238,2.77e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.810035629990144,0,1.14260393761521,0.662605622854841,1.5923803897944,0.575072826109418,0.919218786610021,0,2.17068474744819,0.921639199537461,2.37395317914349,2.92760459527711,3.64639359389732,0.558365998002762,1.12552522006336,1.37518422999129,0.883885756421003,2.27794689278565,1.86399445825301,0.075726193333184,2.19157524309678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.3481157546434,0,2.38743269014442,0.869121600961382,0,0.62336413367868,1.1356888414743,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0.94652465824877,0.390438744296638,1.07711698866399,1.43381278771531,1.55959071857676,1.98153571552183,0.404810701674894,0.292255857911312,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.443068581523732,0.302899349844443,0.228620419965,0.201652370273681,0.194915761479505,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,1.20297227640581,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.682934423016537,0.243106717068294,0.628839487883947,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.631790158511746,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,0.147198920134397,0.342869252385415,0,0.476872379894642,0.726732083161643,0.470546902076653,0.169229215783353,0.182927972872773,1.05227884575137,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0,0.192906610981141,2.24829520144151,0,0.429742108096597,0.382576664137687,0,0|short_description=p11@Chl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12661 | |||
|HGNC= | |||
|MCL_coexpression_id=1203 | |||
|TSSclassifier=NA | |||
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | |||
|association_with_transcript=32bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |||
|cluster_id=chr6:103460902..103460911,+ | |||
|description=CAGE_peak_11_at_Chl1_5end | |||
|id=chr6:103460902..103460911,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.38e-23!33;CL:0000047!1.38e-23!33;CL:0000031!1.38e-23!33;CL:0000404!1.38e-23!33;CL:0000393!3.79e-18!39;CL:0000211!3.79e-18!39;CL:0002319!6.40e-18!43;CL:0000117!1.80e-17!23;CL:0000337!1.80e-17!23;CL:0000221!3.07e-17!44;CL:0000133!3.07e-17!44;CL:0000055!9.13e-14!50;CL:0000107!3.16e-08!9;CL:0002321!7.66e-07!70;CL:0000220!7.66e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.93e-28,33;CL:0000047,8.93e-28,33;CL:0000031,8.93e-28,33;CL:0000404,8.93e-28,33;CL:0002319,4.23e-23,43;CL:0000393,6.32e-23,39;CL:0000211,6.32e-23,39;CL:0000221,1.74e-22,44;CL:0000133,1.74e-22,44;CL:0000117,2.79e-21,23;CL:0000337,2.79e-21,23;CL:0002321,1.16e-12,70;CL:0002613,3.39e-11,3;CL:0000120,3.56e-10,3;CL:0000107,2.17e-08,9;CL:0000723,1.10e-07,91;CL:0000048,1.10e-07,91;CL:0000034,5.57e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.31e-24!75;UBERON:0001016!7.31e-24!75;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0004121!5.55e-17!102;UBERON:0000924!5.55e-17!102;UBERON:0006601!5.55e-17!102;UBERON:0001049!1.63e-15!52;UBERON:0005068!1.63e-15!52;UBERON:0006241!1.63e-15!52;UBERON:0007135!1.63e-15!52;UBERON:0002020!7.16e-15!34;UBERON:0002346!2.01e-13!71;UBERON:0003075!2.01e-13!71;UBERON:0007284!2.01e-13!71;UBERON:0002616!3.66e-12!49;UBERON:0000955!1.04e-11!50;UBERON:0006238!1.04e-11!50;UBERON:0002791!7.15e-11!29;UBERON:0003528!7.15e-11!29;UBERON:0001893!7.15e-11!29;UBERON:0003080!1.25e-09!40;UBERON:0000010!2.46e-09!11;UBERON:0000033!5.01e-09!63;UBERON:0002780!6.28e-09!39;UBERON:0001890!6.28e-09!39;UBERON:0006240!6.28e-09!39;UBERON:0003056!2.77e-08!49;UBERON:0002410!3.16e-08!9;UBERON:0007811!5.72e-08!86;UBERON:0003076!2.37e-07!12;UBERON:0003057!2.37e-07!12;UBERON:0000153!2.87e-07!94;UBERON:0002420!6.62e-07!8;UBERON:0007245!6.62e-07!8;UBERON:0010009!6.62e-07!8;UBERON:0010011!6.62e-07!8;UBERON:0000454!6.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.09e-21,75;UBERON:0001017,2.65e-20,73;UBERON:0004121,4.08e-16,95;UBERON:0000924,4.08e-16,95;UBERON:0006601,4.08e-16,95;UBERON:0002420,1.63e-14,8;UBERON:0007245,1.63e-14,8;UBERON:0010009,1.63e-14,8;UBERON:0010011,1.63e-14,8;UBERON:0000454,1.63e-14,8;UBERON:0000073,1.13e-11,54;UBERON:0000369,1.81e-11,5;UBERON:0002435,1.81e-11,5;UBERON:0000204,1.81e-11,5;UBERON:0010082,1.81e-11,5;UBERON:0002020,3.07e-11,34;UBERON:0001049,1.52e-10,52;UBERON:0005068,1.52e-10,52;UBERON:0006241,1.52e-10,52;UBERON:0007135,1.52e-10,52;UBERON:0000011,3.32e-10,3;UBERON:0000010,1.00e-09,11;UBERON:0002346,3.17e-09,64;UBERON:0003075,3.17e-09,64;UBERON:0007284,3.17e-09,64;UBERON:0002410,2.17e-08,9;UBERON:0010371,1.09e-07,73;UBERON:0003080,1.60e-07,40;UBERON:0002616,1.72e-07,46;UBERON:0003528,1.82e-07,29;UBERON:0002791,1.82e-07,29;UBERON:0001893,1.82e-07,29;UBERON:0002950,2.64e-07,4;UBERON:0001891,2.64e-07,4;UBERON:0009616,2.64e-07,4;UBERON:0010286,2.64e-07,4;UBERON:0000955,2.77e-07,47;UBERON:0006238,2.77e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.810035629990144,0,1.14260393761521,0.662605622854841,1.5923803897944,0.575072826109418,0.919218786610021,0,2.17068474744819,0.921639199537461,2.37395317914349,2.92760459527711,3.64639359389732,0.558365998002762,1.12552522006336,1.37518422999129,0.883885756421003,2.27794689278565,1.86399445825301,0.075726193333184,2.19157524309678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.3481157546434,0,2.38743269014442,0.869121600961382,0,0.62336413367868,1.1356888414743,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0.94652465824877,0.390438744296638,1.07711698866399,1.43381278771531,1.55959071857676,1.98153571552183,0.404810701674894,0.292255857911312,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.443068581523732,0.302899349844443,0.228620419965,0.201652370273681,0.194915761479505,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,1.20297227640581,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.682934423016537,0.243106717068294,0.628839487883947,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.631790158511746,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,0.147198920134397,0.342869252385415,0,0.476872379894642,0.726732083161643,0.470546902076653,0.169229215783353,0.182927972872773,1.05227884575137,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0,0.192906610981141,2.24829520144151,0,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p11@Chl1 | |||
}} |
Latest revision as of 10:27, 26 September 2015
Short description: | p11@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | 32bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | Chl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.93e-28 | 33 |
neuronal stem cell | 8.93e-28 | 33 |
neuroblast | 8.93e-28 | 33 |
electrically signaling cell | 8.93e-28 | 33 |
neural cell | 4.23e-23 | 43 |
electrically responsive cell | 6.32e-23 | 39 |
electrically active cell | 6.32e-23 | 39 |
ectodermal cell | 1.74e-22 | 44 |
neurectodermal cell | 1.74e-22 | 44 |
CNS neuron (sensu Vertebrata) | 2.79e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.79e-21 | 23 |
embryonic cell | 1.16e-12 | 70 |
striatum neuron | 3.39e-11 | 3 |
granule cell | 3.56e-10 | 3 |
autonomic neuron | 2.17e-08 | 9 |
somatic stem cell | 1.10e-07 | 91 |
multi fate stem cell | 1.10e-07 | 91 |
stem cell | 5.57e-07 | 97 |