FFCP PHASE1:Mm9::chr5:92391901..92391936,+: Difference between revisions
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{{FFCP|EntrezGene=381650|HGNC=|UniProt=|association_with_transcript=0bp_to_NR_028429,uc008yca.2,uc008ycb.2_5end|description=CAGE_peak_1_at_Thap6_5end|id=chr5:92391901..92391936,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.83e-11!59;UBERON:0000160!1.07e-09!43;UBERON:0004119!8.43e-09!130;UBERON:0000925!8.43e-09!130;UBERON:0006595!8.43e-09!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0004921!2.27e-07!126;UBERON:0004185!2.27e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.61e-10,47;UBERON:0000160,2.31e-08,31;UBERON:0004119,3.88e-07,118;UBERON:0000925,3.88e-07,118;UBERON:0006595,3.88e-07,118|phase1_expression=4.00372117761985,4.88565570695105,3.18499467572675,4.23449895829562,5.00895729946347,4.36486106970913,4.67225281191051,2.32421982194837,1.97104211012333,0.468129052643987,3.4243593645101,1.91453181588807,2.56801094896809,4.19617931611188,1.66554880907831,3.84703008040669,2.79824751251259,2.99689057090326,3.56497527374921,3.39511721438424,2.38121212422995,4.26951090163807,3.39559725880616,6.39969691173627,6.65286915094793,2.29692785646008,3.87685796543167,5.17130958446134,6.46079626151671,4.53654233567875,4.43461021310609,2.54012269383853,4.30545351309199,0,5.19932915552294,3.65716219788683,2.85837098767317,4.18531630736908,5.4693474116666,3.66466620781659,0,0.683045484958446,3.39857247121808,1.88845226963366,2.53442328048786,3.48738829107195,3.12956537739216,1.09012578190223,2.19686182734472,2.52758868796568,4.33957907038624,1.43752564364972,2.18117387875057,0.725362142011344,2.35265659399725,1.80081605225163,3.72493471920384,2.57836046138721,1.82084814773638,1.05798195854407,2.53532561402472,3.04960078862219,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,1.97010263386108,0.810035629990144,1.26194976810829,0.856952953211411,0.662605622854841,0.979926393719632,1.62937300731002,0,2.20231761998777,1.65993539510744,1.38245879930619,3.03338461779446,1.82975287204819,1.04182674111352,1.67509799400829,0.56276261003168,1.37518422999129,1.47314292736834,0.996601765593721,1.86399445825301,5.07365495332333,3.85414956544606,2.31891590961342,0.860423876981386,2.03991400112325,1.07940638327563,4.54843492213368,3.13618820968135,3.5111105032938,3.2381761289831,1.55871602761721,0.35333957451034,3.66192891419369,1.28326477414318,0,0,2.38140145112336,3.04031838570118,1.01104889002957,4.68153906848146,4.14300613835475,5.04703272820404,2.25530924795977,2.74018930480927,5.30415643688935,5.87818298155228,6.11461277105665,6.28332956648377,10.6293836125781,3.18118585223806,2.65383165584962,4.04417124868523,2.87093973998512,1.93950101254089,13.0474232852686,3.80615036115011,2.09446706813455,7.91916871146633,2.15667224110656,3.59941638596045,2.92261522268049,1.9472783122627,2.74500361691176,1.63350657746724,1.04294592115366,1.02286182932132,2.70124457927428,1.46017136760982,3.25885964321012,3.4833951770826,6.06534620240819,6.52369753248069,5.98554037628437,4.36813998423599,5.04173963454978,3.76762044589288,4.28629944653366,5.25266253167884,3.65436725782942,5.95017752699736,3.88022387279116,3.59301552318857,3.16712023495108,3.72632745126877,2.78047249225598,4.179025998266,4.11564272815887,5.37392520409932,2.1066395619397,2.31613116403244,3.12579849335152,3.31401236056803,2.57978665979206,3.6012412292203,3.31442629819294,4.32881309844288,2.77680803197281,5.8133486187602,2.95100741539581,4.2035523252181,4.11399624783701,2.46251196118643,4.62092214411378,3.21639972335731,3.73235195994786,3.62357330653004,0.630869845692382,2.05809224758569,3.96502539580558,5.02456076660734,4.69234151177515,4.41249676534833,5.28356591420583,8.26902450955704,6.22658522765637,6.46767128782701,5.69434873853414,3.12928013975621,5.7807098024062,6.16765063327568,5.45899443933536,10.7858329038507,6.48414149624083,6.17337947088538,2.84501851429623,3.65595240351132,4.50830942692322,3.05476991767971,5.62462212786115,5.33032231166421,5.31186911843761,4.28069429140846,5.49495547444812,7.40382983530803,2.37162101669719,4.67166296005063,4.91397487783007,6.97072548393047,5.27436315610108,5.788251834058,4.07401362850272,4.31544206176216,4.53978634970099,3.0201755450689,4.31304619582064,3.34926852901653,5.30464044294753,4.54641980304801,6.81710171383266,6.27176577772377,4.24932337383191,2.84237117655727,3.42226450528254,2.8856664581782,3.98973422090454,5.52770649557992,4.04674189506223,3.70753930929818,2.36452716159286,2.21464689648775,3.82691444777969,1.80249646187312,3.62638461918381,4.19482269886384,1.50791283939272,1.08781136763742,4.91764273019036,4.69092468718045,2.0871576698413,2.81308047821288,1.14754461763673,1.51482556322624,3.15508219416257,2.73307121007647,1.93881057959519,3.10659437338318,2.89638276307112,1.41538265394416,2.83367491172426,1.46127928955656,3.16230222357219,0.642642632843614,5.39372323791421,3.73937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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381650 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_028429,uc008yca.2,uc008ycb.2_5end | |||
|cluster_id=chr5:92391901..92391936,+ | |||
|description=CAGE_peak_1_at_Thap6_5end | |||
|id=chr5:92391901..92391936,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.83e-11!59;UBERON:0000160!1.07e-09!43;UBERON:0004119!8.43e-09!130;UBERON:0000925!8.43e-09!130;UBERON:0006595!8.43e-09!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0004921!2.27e-07!126;UBERON:0004185!2.27e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.61e-10,47;UBERON:0000160,2.31e-08,31;UBERON:0004119,3.88e-07,118;UBERON:0000925,3.88e-07,118;UBERON:0006595,3.88e-07,118 | |||
|phase1_expression=4.00372117761985,4.88565570695105,3.18499467572675,4.23449895829562,5.00895729946347,4.36486106970913,4.67225281191051,2.32421982194837,1.97104211012333,0.468129052643987,3.4243593645101,1.91453181588807,2.56801094896809,4.19617931611188,1.66554880907831,3.84703008040669,2.79824751251259,2.99689057090326,3.56497527374921,3.39511721438424,2.38121212422995,4.26951090163807,3.39559725880616,6.39969691173627,6.65286915094793,2.29692785646008,3.87685796543167,5.17130958446134,6.46079626151671,4.53654233567875,4.43461021310609,2.54012269383853,4.30545351309199,0,5.19932915552294,3.65716219788683,2.85837098767317,4.18531630736908,5.4693474116666,3.66466620781659,0,0.683045484958446,3.39857247121808,1.88845226963366,2.53442328048786,3.48738829107195,3.12956537739216,1.09012578190223,2.19686182734472,2.52758868796568,4.33957907038624,1.43752564364972,2.18117387875057,0.725362142011344,2.35265659399725,1.80081605225163,3.72493471920384,2.57836046138721,1.82084814773638,1.05798195854407,2.53532561402472,3.04960078862219,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,1.97010263386108,0.810035629990144,1.26194976810829,0.856952953211411,0.662605622854841,0.979926393719632,1.62937300731002,0,2.20231761998777,1.65993539510744,1.38245879930619,3.03338461779446,1.82975287204819,1.04182674111352,1.67509799400829,0.56276261003168,1.37518422999129,1.47314292736834,0.996601765593721,1.86399445825301,5.07365495332333,3.85414956544606,2.31891590961342,0.860423876981386,2.03991400112325,1.07940638327563,4.54843492213368,3.13618820968135,3.5111105032938,3.2381761289831,1.55871602761721,0.35333957451034,3.66192891419369,1.28326477414318,0,0,2.38140145112336,3.04031838570118,1.01104889002957,4.68153906848146,4.14300613835475,5.04703272820404,2.25530924795977,2.74018930480927,5.30415643688935,5.87818298155228,6.11461277105665,6.28332956648377,10.6293836125781,3.18118585223806,2.65383165584962,4.04417124868523,2.87093973998512,1.93950101254089,13.0474232852686,3.80615036115011,2.09446706813455,7.91916871146633,2.15667224110656,3.59941638596045,2.92261522268049,1.9472783122627,2.74500361691176,1.63350657746724,1.04294592115366,1.02286182932132,2.70124457927428,1.46017136760982,3.25885964321012,3.4833951770826,6.06534620240819,6.52369753248069,5.98554037628437,4.36813998423599,5.04173963454978,3.76762044589288,4.28629944653366,5.25266253167884,3.65436725782942,5.95017752699736,3.88022387279116,3.59301552318857,3.16712023495108,3.72632745126877,2.78047249225598,4.179025998266,4.11564272815887,5.37392520409932,2.1066395619397,2.31613116403244,3.12579849335152,3.31401236056803,2.57978665979206,3.6012412292203,3.31442629819294,4.32881309844288,2.77680803197281,5.8133486187602,2.95100741539581,4.2035523252181,4.11399624783701,2.46251196118643,4.62092214411378,3.21639972335731,3.73235195994786,3.62357330653004,0.630869845692382,2.05809224758569,3.96502539580558,5.02456076660734,4.69234151177515,4.41249676534833,5.28356591420583,8.26902450955704,6.22658522765637,6.46767128782701,5.69434873853414,3.12928013975621,5.7807098024062,6.16765063327568,5.45899443933536,10.7858329038507,6.48414149624083,6.17337947088538,2.84501851429623,3.65595240351132,4.50830942692322,3.05476991767971,5.62462212786115,5.33032231166421,5.31186911843761,4.28069429140846,5.49495547444812,7.40382983530803,2.37162101669719,4.67166296005063,4.91397487783007,6.97072548393047,5.27436315610108,5.788251834058,4.07401362850272,4.31544206176216,4.53978634970099,3.0201755450689,4.31304619582064,3.34926852901653,5.30464044294753,4.54641980304801,6.81710171383266,6.27176577772377,4.24932337383191,2.84237117655727,3.42226450528254,2.8856664581782,3.98973422090454,5.52770649557992,4.04674189506223,3.70753930929818,2.36452716159286,2.21464689648775,3.82691444777969,1.80249646187312,3.62638461918381,4.19482269886384,1.50791283939272,1.08781136763742,4.91764273019036,4.69092468718045,2.0871576698413,2.81308047821288,1.14754461763673,1.51482556322624,3.15508219416257,2.73307121007647,1.93881057959519,3.10659437338318,2.89638276307112,1.41538265394416,2.83367491172426,1.46127928955656,3.16230222357219,0.642642632843614,5.39372323791421,3.73937767701236,4.56083486190013,3.95928295134085,6.63725691699814,1.45668381692989,5.13950046840077,7.16699303072413,5.90603785761546,7.37844355065426,4.9101375701962,5.81653967164009,3.92147116223193,3.79244109522979,4.21674434299995,2.06271086496374,7.14923172082955,7.20244376125241,5.17434735131018,8.14480733120051,7.98031051390231,10.167022603318,5.92376474167636,3.95804433848979,5.63212099352905,10.3797714723272,5.51320995137405,3.13283880588812,3.39075296061402,4.70440814439616,2.74556391207214,6.07321329056727,5.53813589596716,2.78137953015765,4.27177201994632,2.68302928352189,5.00025223898222,3.01389531207506,3.55404992074665,3.66045077130436,2.20971958992012,1.95932033253121,2.62579950228405,5.72802370809068,5.3777118908793,5.48962561242491,4.42821897369385,4.3908542163038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| |||
|short_description=p1@Thap6 | |||
}} |
Latest revision as of 08:54, 26 September 2015
Short description: | p1@Thap6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Thap6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_028429, uc008yca.2, uc008ycb.2_5end |
EntrezGene: | Thap6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.61e-10 | 47 |
intestine | 2.31e-08 | 31 |
endoderm-derived structure | 3.88e-07 | 118 |
endoderm | 3.88e-07 | 118 |
presumptive endoderm | 3.88e-07 | 118 |