FFCP PHASE1:Mm9::chr5:73893884..73893893,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=97|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:73893884..73893893,+|id=chr5:73893884..73893893,+|ontology_enrichment_celltype=CL:0000349!1.49e-13!3;CL:0000351!1.49e-13!3|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.49e-13!3;UBERON:0000307!1.49e-13!3;UBERON:0000014!3.06e-13!5;UBERON:0001003!3.06e-13!5;UBERON:0002097!3.06e-13!5;UBERON:0002199!3.06e-13!5;UBERON:0007029!3.06e-13!5;UBERON:0007376!3.06e-13!5;UBERON:0002416!3.06e-13!5;UBERON:0007383!3.06e-13!5;UBERON:0005795!6.02e-10!4;UBERON:0000995!6.02e-10!4;UBERON:0001987!2.19e-09!2;UBERON:0003124!2.19e-09!2;UBERON:0004340!2.19e-09!2;UBERON:0003975!4.85e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,1.0591603543191,0,0,0.645857706783622,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,5.99362074109975,3.58855426437903,6.88326927092722,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:73893884..73893893,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:73893884..73893893,+ | |||
|description=CAGE_peak_at_chr5:73893884..73893893,+ | |||
|id=chr5:73893884..73893893,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.49e-13!3;CL:0000351!1.49e-13!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.49e-13!3;UBERON:0000307!1.49e-13!3;UBERON:0000014!3.06e-13!5;UBERON:0001003!3.06e-13!5;UBERON:0002097!3.06e-13!5;UBERON:0002199!3.06e-13!5;UBERON:0007029!3.06e-13!5;UBERON:0007376!3.06e-13!5;UBERON:0002416!3.06e-13!5;UBERON:0007383!3.06e-13!5;UBERON:0005795!6.02e-10!4;UBERON:0000995!6.02e-10!4;UBERON:0001987!2.19e-09!2;UBERON:0003124!2.19e-09!2;UBERON:0004340!2.19e-09!2;UBERON:0003975!4.85e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,1.0591603543191,0,0,0.645857706783622,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,5.99362074109975,3.58855426437903,6.88326927092722,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:73893884..73893893,+ | |||
}} |
Latest revision as of 14:29, 4 August 2015
Short description: | p@chr5:73893884..73893893, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73893884..73893893, + |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.90e-53 | 3 |
trophoblast cell | 4.90e-53 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.90e-53 | 3 |
blastula | 4.90e-53 | 3 |
cleaving embryo | 4.90e-53 | 3 |
placenta | 4.75e-35 | 2 |
chorion | 4.75e-35 | 2 |
allantois | 4.75e-35 | 2 |
extraembryonic membrane | 8.72e-24 | 3 |
extraembryonic structure | 8.72e-24 | 3 |
membranous layer | 8.72e-24 | 3 |
embryonic uterus | 3.89e-18 | 4 |
uterus | 3.89e-18 | 4 |
internal female genitalia | 9.80e-15 | 5 |
female reproductive organ | 1.32e-09 | 8 |
internal genitalia | 1.20e-08 | 9 |
female reproductive system | 1.20e-08 | 9 |
female organism | 3.00e-07 | 11 |