FFCP PHASE1:Hg19::chr9:125133477..125133518,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9604 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=113bp_to_uc004bmh.1_5end | |||
|cluster_id=chr9:125133477..125133518,+ | |||
|description=CAGE_peak_5_at_PTGS1_5end | |||
|id=chr9:125133477..125133518,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.27e-10!75;CL:0000055!3.39e-10!180;CL:0002334!1.95e-09!12;CL:0000048!2.66e-08!430;CL:0000680!6.00e-08!57;CL:0000056!6.00e-08!57;CL:0000355!6.00e-08!57;CL:0000723!6.15e-08!436;CL:0000187!1.41e-07!54;CL:0000034!2.25e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.95e-15;5!CL:0002552;3.89e-13;5!CL:0002334;2.95e-12;12!CL:0002615;6.48e-09;3!CL:0002579;2.11e-08;3!CL:0000163;4.46e-08;9!CL:0000057;1.04e-07;73!CL:1000306;3.40e-07;4!CL:0002547;3.40e-07;4!CL:0000136;4.95e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.73e-18,76;CL:0000097,5.52e-15,5;CL:0002028,5.52e-15,5;CL:0002552,4.23e-13,5;CL:0002334,3.66e-12,12;CL:0002615,6.25e-09,3;CL:0002579,2.57e-08,3;CL:0000163,4.29e-08,9;CL:0000048,8.77e-08,427;CL:0000723,1.73e-07,433;CL:1000306,3.41e-07,4;CL:0002547,3.41e-07,4;CL:0000034,4.17e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.69e-10!83;UBERON:0002329!7.69e-10!83;UBERON:0003077!7.69e-10!83;UBERON:0003059!7.69e-10!83;UBERON:0007282!7.69e-10!83;UBERON:0009618!7.69e-10!83;UBERON:0007285!7.69e-10!83;UBERON:0004872!1.44e-08!84;UBERON:0002385!2.18e-08!63;UBERON:0001015!2.18e-08!63;UBERON:0000383!2.18e-08!63;UBERON:0004290!3.31e-08!70;UBERON:0004535!8.82e-08!110;UBERON:0001009!1.31e-07!113;UBERON:0001637!1.31e-07!42;UBERON:0003509!1.31e-07!42;UBERON:0004572!1.31e-07!42;UBERON:0001134!1.86e-07!61;UBERON:0002036!1.86e-07!61;UBERON:0003082!1.86e-07!61;UBERON:0002204!3.38e-07!167;UBERON:0000926!6.31e-07!448;UBERON:0004120!6.31e-07!448;UBERON:0006603!6.31e-07!448;UBERON:0003688!8.78e-07!6;UBERON:0002358!8.78e-07!6;UBERON:0003684!8.78e-07!6;UBERON:0001178!8.78e-07!6;UBERON:0005256!9.92e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.27e-15;6!UBERON:0002358;1.27e-15;6!UBERON:0003684;1.27e-15;6!UBERON:0001178;1.27e-15;6!UBERON:0004457;3.69e-10;9!UBERON:0000042;3.69e-10;9!UBERON:0004573;6.21e-10;33!UBERON:0004571;6.21e-10;33!UBERON:0001637;3.61e-08;42!UBERON:0003509;3.61e-08;42!UBERON:0004572;3.61e-08;42!UBERON:0001828;4.60e-08;8!UBERON:0004797;3.40e-07;4!UBERON:0000415;3.40e-07;4!UBERON:0007240;3.40e-07;4!UBERON:0005742;3.40e-07;4!UBERON:0005734;3.40e-07;4!UBERON:0004664;3.40e-07;4!UBERON:0004663;3.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.49e-15,6;UBERON:0002358,1.49e-15,6;UBERON:0003684,1.49e-15,6;UBERON:0001178,1.49e-15,6;UBERON:0004573,6.94e-11,33;UBERON:0004571,6.94e-11,33;UBERON:0001637,9.59e-11,42;UBERON:0003509,9.59e-11,42;UBERON:0004572,9.59e-11,42;UBERON:0000161,3.02e-09,36;UBERON:0001828,4.83e-08,8;UBERON:0004122,7.92e-08,15;UBERON:0004872,1.01e-07,83;UBERON:0004535,1.30e-07,109;UBERON:0004923,1.60e-07,66;UBERON:0004457,2.15e-07,12;UBERON:0000042,2.15e-07,12;UBERON:0001009,2.91e-07,112;UBERON:0000415,3.41e-07,4;UBERON:0007240,3.41e-07,4;UBERON:0005742,3.41e-07,4;UBERON:0005734,3.41e-07,4;UBERON:0004664,3.41e-07,4;UBERON:0004663,3.41e-07,4;UBERON:0000055,4.06e-07,68;UBERON:0002100,4.55e-07,199;UBERON:0000926,7.54e-07,315;UBERON:0004120,7.54e-07,315;UBERON:0006603,7.54e-07,315;UBERON:0000165,7.94e-07,29;UBERON:0000930,7.94e-07,29 | |||
|phase1_expression=4.1786027232228,1.07050261945492,7.04772020479856,4.00293193412522,1.34088328328186,0.872338524100369,0,13.8978372153903,0.783556884599516,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.157421562627358,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.447830948479849,0,0.257575567634187,0.581592955118259,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0,0,0,0,0,0,1.13061588384802,3.35599548967925,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0.496971951695318,5.44511200157693,0.132409180813219,28.6836620748814,3.19201543978521,0,0,0.24666754841716,3.11211035399766,2.15537075311501,0.490385709340376,0,0,0,6.86752169026705,0.570471821544449,3.13842229158782,0.117434498643765,0.161872944368132,0,3.0623125688234,1.22834317311768,5.6829179646671,1.18800285728205,2.96720315134268,1.82032272387605,2.15585442544872,0.336672227908132,1.12606667884768,2.77064115484183,0,0,1.80285670687916,0.794025282120147,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0,0.0895585227028483,0,0,4.43396914106349,4.66656700270098,19.9034990919141,15.132595108781,18.936365013957,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,2.83698264046557,0,1.14382394926518,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,2.49800584316026,1.26161932027148,0.117141414992713,0,0,1.03473071292505,0,0,2.86715927744673,0.195801157462741,0,0.413536052245775,0,0,0,0,0.30239029332968,1.73675465473144,0.153461973288062,1.12264037773229,7.94462725385346,1.02341449813341,1.60853921143608,4.45254199334973,0.308419387605311,1.59805552781814,0.328508624055237,1.03850885836724,0.464841513839837,0,0,0.0920809889358963,0.34444334449382,1.27463817604702,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0.650060246036521,3.21367859688319,0.096670718292122,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,0,0,0,6.2962469366128,0.6970372701606,2.7723022215848,0,0.869932992075073,0.37064843820784,1.14499909393593,0,0,0.190630193923825,0.511795582622668,0.855877976067841,2.54562598340749,2.35484592059769,0.359744915166629,0.54907405947211,0,2.62837226045311,0,0,0,0.243713489631284,0,1.22849920267187,2.96951407102797,1.13008116620243,1.65409603063837,9.95158462861829,6.57676327880644,0,0,0,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.70894156152249,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0.511572370226872,11.7385652707951,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.461701551022782,0,0,0,0,0,0.824378340616761,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0,0,2.38835424159016,1.22206028986725,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0.979923974143776,0,0,0,0,0,0,1.93978032976839,0,0,0,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0.272406812223151,0,0,0,1.1248694577575,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.701139929541673,0,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.777186002913902,1.33069634990671,0.318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| |||
|short_description=p5@PTGS1 | |||
}} |
Latest revision as of 22:23, 24 September 2015
Short description: | p5@PTGS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTGS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_uc004bmh.1_5end |
EntrezGene: | PTGS1 |
HGNC: | 9604 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.73e-18 | 76 |
mast cell | 5.52e-15 | 5 |
basophil mast progenitor cell | 5.52e-15 | 5 |
fibroblast of gingiva | 4.23e-13 | 5 |
preadipocyte | 3.66e-12 | 12 |
adipocyte of omentum tissue | 6.25e-09 | 3 |
omentum preadipocyte | 2.57e-08 | 3 |
endocrine cell | 4.29e-08 | 9 |
multi fate stem cell | 8.77e-08 | 427 |
somatic stem cell | 1.73e-07 | 433 |
fibroblast of tunica adventitia of artery | 3.41e-07 | 4 |
fibroblast of the aortic adventitia | 3.41e-07 | 4 |
stem cell | 4.17e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.49e-15 | 6 |
peritoneum | 1.49e-15 | 6 |
abdominal cavity | 1.49e-15 | 6 |
visceral peritoneum | 1.49e-15 | 6 |
systemic artery | 6.94e-11 | 33 |
systemic arterial system | 6.94e-11 | 33 |
artery | 9.59e-11 | 42 |
arterial blood vessel | 9.59e-11 | 42 |
arterial system | 9.59e-11 | 42 |
orifice | 3.02e-09 | 36 |
gingiva | 4.83e-08 | 8 |
genitourinary system | 7.92e-08 | 15 |
splanchnic layer of lateral plate mesoderm | 1.01e-07 | 83 |
cardiovascular system | 1.30e-07 | 109 |
organ component layer | 1.60e-07 | 66 |
cavity lining | 2.15e-07 | 12 |
serous membrane | 2.15e-07 | 12 |
circulatory system | 2.91e-07 | 112 |
artery wall | 3.41e-07 | 4 |
tunica adventitia of artery | 3.41e-07 | 4 |
adventitia | 3.41e-07 | 4 |
tunica adventitia of blood vessel | 3.41e-07 | 4 |
aorta tunica adventitia | 3.41e-07 | 4 |
aorta wall | 3.41e-07 | 4 |
vessel | 4.06e-07 | 68 |
trunk | 4.55e-07 | 199 |
mesoderm | 7.54e-07 | 315 |
mesoderm-derived structure | 7.54e-07 | 315 |
presumptive mesoderm | 7.54e-07 | 315 |
mouth | 7.94e-07 | 29 |
stomodeum | 7.94e-07 | 29 |