FFCP PHASE1:Mm9::chr5:27588588..27588604,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13483|HGNC=|MCL_coexpression_id=2|UniProt=Q80VM5,D6RFR3|association_with_transcript=73bp_to_ENSMUST00000101471,ENSMUST00000148039_5end|description=CAGE_peak_12_at_Dpp6_5end|id=chr5:27588588..27588604,+|ontology_enrichment_celltype=CL:0000117!3.67e-12!23;CL:0000337!3.67e-12!23;CL:0000540!4.38e-09!33;CL:0000047!4.38e-09!33;CL:0000031!4.38e-09!33;CL:0000404!4.38e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-17,23;CL:0000337,7.05e-17,23;CL:0000540,1.65e-10,33;CL:0000047,1.65e-10,33;CL:0000031,1.65e-10,33;CL:0000404,1.65e-10,33;CL:0000393,2.76e-08,39;CL:0000211,2.76e-08,39;CL:0002319,3.68e-07,43;CL:0000221,6.50e-07,44;CL:0000133,6.50e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-29!71;UBERON:0003075!1.73e-29!71;UBERON:0007284!1.73e-29!71;UBERON:0001049!4.05e-25!52;UBERON:0005068!4.05e-25!52;UBERON:0006241!4.05e-25!52;UBERON:0007135!4.05e-25!52;UBERON:0003056!6.11e-25!49;UBERON:0001017!7.70e-25!73;UBERON:0005743!7.70e-25!73;UBERON:0000033!5.54e-24!63;UBERON:0000073!1.63e-23!75;UBERON:0001016!1.63e-23!75;UBERON:0000955!3.48e-22!50;UBERON:0006238!3.48e-22!50;UBERON:0002616!1.92e-21!49;UBERON:0004121!2.05e-21!102;UBERON:0000924!2.05e-21!102;UBERON:0006601!2.05e-21!102;UBERON:0003080!3.93e-20!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0002020!2.04e-19!34;UBERON:0002791!5.58e-16!29;UBERON:0003528!5.58e-16!29;UBERON:0001893!5.58e-16!29;UBERON:0007811!3.41e-14!86;UBERON:0000153!8.53e-12!94;UBERON:0000956!2.40e-10!21;UBERON:0001869!2.40e-10!21;UBERON:0000203!2.40e-10!21;UBERON:0002619!4.35e-10!17;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0002420!4.41e-07!8;UBERON:0007245!4.41e-07!8;UBERON:0010009!4.41e-07!8;UBERON:0010011!4.41e-07!8;UBERON:0000454!4.41e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.18e-41,64;UBERON:0003075,4.18e-41,64;UBERON:0007284,4.18e-41,64;UBERON:0000073,9.98e-39,54;UBERON:0001049,4.44e-38,52;UBERON:0005068,4.44e-38,52;UBERON:0006241,4.44e-38,52;UBERON:0007135,4.44e-38,52;UBERON:0001017,5.65e-36,73;UBERON:0003056,2.83e-35,49;UBERON:0010371,9.00e-35,73;UBERON:0001016,9.70e-35,75;UBERON:0004121,1.01e-34,95;UBERON:0000924,1.01e-34,95;UBERON:0006601,1.01e-34,95;UBERON:0000955,1.05e-32,47;UBERON:0006238,1.05e-32,47;UBERON:0002020,2.34e-32,34;UBERON:0002616,3.07e-31,46;UBERON:0002780,3.97e-31,39;UBERON:0001890,3.97e-31,39;UBERON:0006240,3.97e-31,39;UBERON:0003080,3.72e-30,40;UBERON:0003528,2.97e-27,29;UBERON:0002791,2.97e-27,29;UBERON:0001893,2.97e-27,29;UBERON:0010314,1.80e-25,92;UBERON:0002021,5.32e-19,10;UBERON:0000411,5.32e-19,10;UBERON:0001950,5.32e-19,10;UBERON:0002619,2.95e-17,17;UBERON:0000956,1.13e-15,21;UBERON:0001869,1.13e-15,21;UBERON:0000203,1.13e-15,21;UBERON:0002420,1.78e-13,8;UBERON:0007245,1.78e-13,8;UBERON:0010009,1.78e-13,8;UBERON:0010011,1.78e-13,8;UBERON:0000454,1.78e-13,8;UBERON:0000025,2.50e-12,114;UBERON:0004111,6.27e-11,122;UBERON:0000369,4.29e-09,5;UBERON:0002435,4.29e-09,5;UBERON:0000204,4.29e-09,5;UBERON:0010082,4.29e-09,5;UBERON:0000483,1.15e-08,174;UBERON:0000119,1.87e-08,176;UBERON:0003076,4.49e-08,12;UBERON:0003057,4.49e-08,12;UBERON:0002240,1.18e-07,6;UBERON:0005174,1.18e-07,6;UBERON:0001137,1.18e-07,6;UBERON:0011216,3.94e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,0.571301968807607,2.42955395046775,1.10241719293459,0.287536413054709,0.919218786610021,0,3.31987079021488,2.30409799884365,2.63772575460388,3.29355516968675,4.16730696445408,2.23346399201105,2.8138130501584,2.59757021220577,2.94628585473668,2.27794689278565,5.03278503728312,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,0.599162557619291,2.28750301409313,1.50785222535437,4.51943232499919,5.11430914660661,1.87009240103604,4.05603157669394,0.203678727700633,0,0,0.210441855886474,0.910843100738926,0.229902104433473,1.80062129805349,1.50704817835715,1.49680298132921,2.3060469651273,1.49922759295566,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,3.39585220851639,0,0,0,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0,0,2.57057053137446,0,0.178065603667255,0.325773918707152,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0,0.709360934569094,1.60531935841864,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0.87345025498471,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.387479470433193,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.38983152295901,0.192423683280659,0,0,0,0,0,0,0,0,0.428736758158132,0.501572104035363,9.03602948187307,9.66682996665071,10.8850147553485,9.28007184655913,1.37016503954128,3.0215755895588,5.40018000185445,6.75481804836331,3.17199686288943,5.1776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.486213434136588,0,0.551530525350042,0.44449345560323,0.206035057238894,0.962757628775446,0,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,1.90517476513229,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0,0.238436189947321,0.290692833264657,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0,0.394017929502254,0,0.309873682371932,0.385813221962283,1.49886346762768,0.233931608445408,1.28922632428979,0,0.661774257358546,0|short_description=p12@Dpp6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13483 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q80VM5,D6RFR3 | |||
|association_with_transcript=73bp_to_ENSMUST00000101471,ENSMUST00000148039_5end | |||
|cluster_id=chr5:27588588..27588604,+ | |||
|description=CAGE_peak_12_at_Dpp6_5end | |||
|id=chr5:27588588..27588604,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.67e-12!23;CL:0000337!3.67e-12!23;CL:0000540!4.38e-09!33;CL:0000047!4.38e-09!33;CL:0000031!4.38e-09!33;CL:0000404!4.38e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-17,23;CL:0000337,7.05e-17,23;CL:0000540,1.65e-10,33;CL:0000047,1.65e-10,33;CL:0000031,1.65e-10,33;CL:0000404,1.65e-10,33;CL:0000393,2.76e-08,39;CL:0000211,2.76e-08,39;CL:0002319,3.68e-07,43;CL:0000221,6.50e-07,44;CL:0000133,6.50e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-29!71;UBERON:0003075!1.73e-29!71;UBERON:0007284!1.73e-29!71;UBERON:0001049!4.05e-25!52;UBERON:0005068!4.05e-25!52;UBERON:0006241!4.05e-25!52;UBERON:0007135!4.05e-25!52;UBERON:0003056!6.11e-25!49;UBERON:0001017!7.70e-25!73;UBERON:0005743!7.70e-25!73;UBERON:0000033!5.54e-24!63;UBERON:0000073!1.63e-23!75;UBERON:0001016!1.63e-23!75;UBERON:0000955!3.48e-22!50;UBERON:0006238!3.48e-22!50;UBERON:0002616!1.92e-21!49;UBERON:0004121!2.05e-21!102;UBERON:0000924!2.05e-21!102;UBERON:0006601!2.05e-21!102;UBERON:0003080!3.93e-20!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0002020!2.04e-19!34;UBERON:0002791!5.58e-16!29;UBERON:0003528!5.58e-16!29;UBERON:0001893!5.58e-16!29;UBERON:0007811!3.41e-14!86;UBERON:0000153!8.53e-12!94;UBERON:0000956!2.40e-10!21;UBERON:0001869!2.40e-10!21;UBERON:0000203!2.40e-10!21;UBERON:0002619!4.35e-10!17;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0002420!4.41e-07!8;UBERON:0007245!4.41e-07!8;UBERON:0010009!4.41e-07!8;UBERON:0010011!4.41e-07!8;UBERON:0000454!4.41e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.18e-41,64;UBERON:0003075,4.18e-41,64;UBERON:0007284,4.18e-41,64;UBERON:0000073,9.98e-39,54;UBERON:0001049,4.44e-38,52;UBERON:0005068,4.44e-38,52;UBERON:0006241,4.44e-38,52;UBERON:0007135,4.44e-38,52;UBERON:0001017,5.65e-36,73;UBERON:0003056,2.83e-35,49;UBERON:0010371,9.00e-35,73;UBERON:0001016,9.70e-35,75;UBERON:0004121,1.01e-34,95;UBERON:0000924,1.01e-34,95;UBERON:0006601,1.01e-34,95;UBERON:0000955,1.05e-32,47;UBERON:0006238,1.05e-32,47;UBERON:0002020,2.34e-32,34;UBERON:0002616,3.07e-31,46;UBERON:0002780,3.97e-31,39;UBERON:0001890,3.97e-31,39;UBERON:0006240,3.97e-31,39;UBERON:0003080,3.72e-30,40;UBERON:0003528,2.97e-27,29;UBERON:0002791,2.97e-27,29;UBERON:0001893,2.97e-27,29;UBERON:0010314,1.80e-25,92;UBERON:0002021,5.32e-19,10;UBERON:0000411,5.32e-19,10;UBERON:0001950,5.32e-19,10;UBERON:0002619,2.95e-17,17;UBERON:0000956,1.13e-15,21;UBERON:0001869,1.13e-15,21;UBERON:0000203,1.13e-15,21;UBERON:0002420,1.78e-13,8;UBERON:0007245,1.78e-13,8;UBERON:0010009,1.78e-13,8;UBERON:0010011,1.78e-13,8;UBERON:0000454,1.78e-13,8;UBERON:0000025,2.50e-12,114;UBERON:0004111,6.27e-11,122;UBERON:0000369,4.29e-09,5;UBERON:0002435,4.29e-09,5;UBERON:0000204,4.29e-09,5;UBERON:0010082,4.29e-09,5;UBERON:0000483,1.15e-08,174;UBERON:0000119,1.87e-08,176;UBERON:0003076,4.49e-08,12;UBERON:0003057,4.49e-08,12;UBERON:0002240,1.18e-07,6;UBERON:0005174,1.18e-07,6;UBERON:0001137,1.18e-07,6;UBERON:0011216,3.94e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,0.571301968807607,2.42955395046775,1.10241719293459,0.287536413054709,0.919218786610021,0,3.31987079021488,2.30409799884365,2.63772575460388,3.29355516968675,4.16730696445408,2.23346399201105,2.8138130501584,2.59757021220577,2.94628585473668,2.27794689278565,5.03278503728312,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,0.599162557619291,2.28750301409313,1.50785222535437,4.51943232499919,5.11430914660661,1.87009240103604,4.05603157669394,0.203678727700633,0,0,0.210441855886474,0.910843100738926,0.229902104433473,1.80062129805349,1.50704817835715,1.49680298132921,2.3060469651273,1.49922759295566,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,3.39585220851639,0,0,0,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0,0.222798674082394,0,0,0,0,2.57057053137446,0,0.178065603667255,0.325773918707152,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0,0.709360934569094,1.60531935841864,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0.87345025498471,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.387479470433193,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.38983152295901,0.192423683280659,0,0,0,0,0,0,0,0,0.428736758158132,0.501572104035363,9.03602948187307,9.66682996665071,10.8850147553485,9.28007184655913,1.37016503954128,3.0215755895588,5.40018000185445,6.75481804836331,3.17199686288943,5.1776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.486213434136588,0,0.551530525350042,0.44449345560323,0.206035057238894,0.962757628775446,0,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,1.90517476513229,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0,0.238436189947321,0.290692833264657,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0,0.394017929502254,0,0.309873682371932,0.385813221962283,1.49886346762768,0.233931608445408,1.28922632428979,0,0.661774257358546,0 | |||
|short_description=p12@Dpp6 | |||
}} |
Latest revision as of 21:17, 25 September 2015
Short description: | p12@Dpp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Dpp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 73bp_to_ENSMUST00000101471, ENSMUST00000148039_5end |
EntrezGene: | Dpp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.05e-17 | 23 |
neuroblast (sensu Vertebrata) | 7.05e-17 | 23 |
neuron | 1.65e-10 | 33 |
neuronal stem cell | 1.65e-10 | 33 |
neuroblast | 1.65e-10 | 33 |
electrically signaling cell | 1.65e-10 | 33 |
electrically responsive cell | 2.76e-08 | 39 |
electrically active cell | 2.76e-08 | 39 |
neural cell | 3.68e-07 | 43 |
ectodermal cell | 6.50e-07 | 44 |
neurectodermal cell | 6.50e-07 | 44 |