FFCP PHASE1:Mm9::chr5:136254570..136254582,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17448|HGNC=|MCL_coexpression_id=635|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000143747_5end|description=CAGE_peak_4_at_Mdh2_5end|id=chr5:136254570..136254582,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.36e-08!18;UBERON:0000948!1.36e-08!18;UBERON:0005498!1.36e-08!18;UBERON:0004140!1.36e-08!18;UBERON:0009881!1.36e-08!18;UBERON:0004141!1.36e-08!18;UBERON:0003084!1.36e-08!18;UBERON:0007005!1.36e-08!18;UBERON:0004139!1.36e-08!18;UBERON:0004291!1.36e-08!18;UBERON:0003103!3.21e-08!43;UBERON:0000344!4.69e-08!15;UBERON:0001242!7.23e-07!13;UBERON:0000060!7.23e-07!13;UBERON:0001262!7.23e-07!13;UBERON:0004786!7.23e-07!13;UBERON:0003914!8.20e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.51e-10,31;UBERON:0007100,1.36e-08,18;UBERON:0000948,1.36e-08,18;UBERON:0005498,1.36e-08,18;UBERON:0004140,1.36e-08,18;UBERON:0009881,1.36e-08,18;UBERON:0004141,1.36e-08,18;UBERON:0003084,1.36e-08,18;UBERON:0007005,1.36e-08,18;UBERON:0004139,1.36e-08,18;UBERON:0004291,1.36e-08,18;UBERON:0003103,3.21e-08,43;UBERON:0000344,4.69e-08,15;UBERON:0001242,7.23e-07,13;UBERON:0001262,7.23e-07,13;UBERON:0004786,7.23e-07,13;UBERON:0003914,8.20e-07,47|phase1_expression=11.3705681444404,291.743440786506,311.219479742443,429.801644267005,354.634176802014,77.728102895205,95.3139573629745,3.09895976259783,12.67098499365,11.2350972634557,3.93801326918661,3.98860794976682,5.30722262786738,2.79745287740792,14.3237197580735,12.3509913107794,11.8925519281785,2.83915948822414,3.42786084014347,5.09267582157636,19.7300433150482,15.1915155337354,22.2019820768095,297.425913972943,255.103120546693,312.956420442686,282.149107484194,205.344084749652,118.95466057969,148.949806688119,73.8362600482165,26.0362576118449,27.0628506537211,0,25.1300909183609,38.4002030778117,29.6045566580435,23.0192396905299,23.440060335714,15.1821885752402,19.4116391050235,22.5405010036287,18.934903768215,7.93149953246137,7.80602370390262,11.3798986340243,11.7358701652206,47.3114589345569,30.7560655828261,25.2758868796568,20.0180582924268,44.5632949531412,2.51673909086605,7.97898356212479,8.4023449785616,23.4106086792712,13.4670716771216,22.6895720602075,14.7691016427506,14.8117474196169,19.6487735086916,15.5868484751801,14.2287167377782,7.19919773825119,11.8663963508037,4.9733608046227,24.8668091730276,28.0479362884735,3.31806759387129,3.91517221161903,2.94454945891935,40.5624397853401,42.4067598627098,4.77714116938321,4.79227355091182,5.51531271966013,34.1359231098105,31.0280231547006,33.3326177166048,13.1886287730194,12.8082701043374,14.5855743755893,37.1313388671837,32.0774687718058,22.4613424231911,42.1318877227345,37.8708670925614,22.927131836512,17.1141196932996,16.0967423027453,13.6236309689789,43.0211938490693,68.6771047044828,40.4777393728363,68.2265238320053,75.7165439194497,143.112864114255,9.71452838694929,13.2490862347463,15.1936017039446,14.3660288172214,16.6824420638613,0,0,20.5666488960653,23.055747758234,22.7486000256652,76.0464638928939,3.6251303710604,12.6175818205101,21.1652098654686,30.142082352902,17.7573932887165,22.759118723446,15.521709341913,33.5529798850234,15.3260879995312,140.984372996914,59.2689069806416,47.7212207344857,109.758234674816,80.0044167673117,82.0123749359738,19.6163133997737,14.6612694769419,235.020490791904,10.4239158320151,19.196887391789,13.4694440697449,21.12048015608,22.4175295381127,6.15706325353036,16.6871347384585,14.3200656104985,32.6227229958509,19.3067103050632,9.980257657331,50.2604161264776,6.82351447770922,40.8257200419759,13.9228873970093,11.2652031172402,12.0641626969584,9.94651797715719,7.55205140579739,12.811372028485,11.3379086717272,46.8253101037618,15.9520314770303,9.07709184805532,7.2139960907219,8.11024209982027,6.39508673218875,9.4028084960985,8.0255033199098,7.76233640592123,30.1951670544691,26.7641823399304,15.344828967362,76.2222842930647,79.2698082736105,86.6098515627481,91.1467232003059,123.371173305622,141.462942517726,186.259689745077,204.15605846511,178.417443137035,200.763016894446,355.422559731241,433.231718213053,563.454751537231,526.920276698522,485.290410237504,14.5100064509248,5.45394445610208,576.580776306727,329.240955496113,13.4371597837197,13.237490296045,16.2373001265838,28.0340099226446,32.0224383136613,35.0015152047109,178.422927140736,56.3270425156117,34.6842588144372,33.2257308308722,34.118715245846,162.686312966414,175.071820398502,210.492325829866,27.3121777372438,15.6520462275328,18.0332377076929,35.63898237293,33.5537802799993,27.5633772168952,31.2388493393831,60.3725505236573,63.8984822314395,61.2049933052131,64.9231253320856,14.8492144087324,18.2799865455279,20.012728002252,11.7658870405332,16.4000468631643,20.3700681425136,17.2617682470486,20.2669033468794,24.7105271869273,24.4405951096503,22.3284568601102,34.3241440426017,45.7167769084272,76.7820929873784,100.830695964944,8.31389355749721,16.6752442358027,10.2667935158476,11.2031756611624,8.91822943496308,12.730475565578,14.0445748122748,10.9274842800367,11.1920952315396,9.96591103419487,9.08892181347676,14.7476983244164,13.6421135674058,7.5217510462386,7.53956419696361,13.053736411649,20.1623351937805,20.9711927191597,34.6789274373631,32.3504254994481,21.4754778443445,386.785460477099,22.085575359138,24.9880796349849,19.8189525914175,11.4705023017225,12.2539270745317,12.1722908239198,17.8116708736954,17.82760733259,13.8350722281283,17.3513510867776,15.1875891172847,15.4917075190512,10.4247653986289,12.0428189769951,2.65490276679926,12.1390318077491,16.3254720760966,13.013750503157,16.5369060013233,10.7602301780375,19.3821219876166,6.90714086007261,9.9819265947722,8.84902922220285,9.48767477174989,4.12542172992747,7.14923172082955,11.8840322060665,17.5927809944546,14.5749183821483,18.2660440651542,12.4858172321449,13.3284706687718,15.22324745573,19.7124234773517,18.0057260234247,10.1443063105282,26.5466867235783,13.4015474157602,12.1832108354875,10.8628833042854,7.2221995887827,132.332299829952,28.9263471136395,11.9609616558497,9.28740905834501,9.07453184111587,8.2882121082064,8.20165366326151,6.86334519619568,7.13909405974192,10.4963589242744,8.56839837587428,83.0563437673149,11.5462637657114,11.7925290933572,14.3647103292996,14.8452690170273,21.1811686833792,21.848024114341,18.2664137152992,62.036158250215,20.3495508068115,16.776161453347,9.58277995763124,11.3632574993424,13.567596217482,12.444876054019,17.4365761694937,9.46154302748358,9.50593633030607,7.68205870579306,10.3810750981454,4.83168241652012,30.2431506570759,8.53230025696081,19.2588954525656,15.3039326175593,12.9920822977795,10.2045216530464,8.94066096515692,7.69250876927801,7.08909730437971,9.08698049533329,5.86792411243499,6.75535440416831,6.04238860586465,4.52195655709548,5.14258369598903,380.453583706325,17.5368903165511,30.5027112472217,17.2921154855001,12.7505132061246,13.3254557570339,11.721703953105,15.6488916727718,6.52043735245972,24.8490810751509,32.2227665555024,29.2176711854092,25.7779773515531,22.6077231524312,17.3740596399631,20.2506750069542,16.6618845192962,13.5942722695261,19.1571315348173,15.9832515279632,12.369771075432,11.2684179797729,11.6691224192781,13.8344687334468,26.8411522337021,49.5610202997602,51.7147993669624,43.3240932948951,38.9153706116248,53.9910908766211,45.0816955912722,32.7745276144588,38.7352172049459,36.6438291936813,40.4849637590613,36.1559096947949,31.6371121560476,42.8569336835439,44.3068749604536,48.0016953339582,45.0788547644717,39.5804075312553,42.4411536566399,36.138002079487,38.7534904143878,43.3539295708471,46.826408635936,35.3090695999241,68.4593571422441,35.7091404553764,35.3631091728273,37.6492559716114,38.5792734553055,32.9870304777752,23.9818154820428,42.3416211286189,53.0731503499297,74.9850261709866,95.0749016405112,113.847107289627|short_description=p4@Mdh2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17448 | |||
|HGNC= | |||
|MCL_coexpression_id=635 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000143747_5end | |||
|cluster_id=chr5:136254570..136254582,+ | |||
|description=CAGE_peak_4_at_Mdh2_5end | |||
|id=chr5:136254570..136254582,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.36e-08!18;UBERON:0000948!1.36e-08!18;UBERON:0005498!1.36e-08!18;UBERON:0004140!1.36e-08!18;UBERON:0009881!1.36e-08!18;UBERON:0004141!1.36e-08!18;UBERON:0003084!1.36e-08!18;UBERON:0007005!1.36e-08!18;UBERON:0004139!1.36e-08!18;UBERON:0004291!1.36e-08!18;UBERON:0003103!3.21e-08!43;UBERON:0000344!4.69e-08!15;UBERON:0001242!7.23e-07!13;UBERON:0000060!7.23e-07!13;UBERON:0001262!7.23e-07!13;UBERON:0004786!7.23e-07!13;UBERON:0003914!8.20e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.51e-10,31;UBERON:0007100,1.36e-08,18;UBERON:0000948,1.36e-08,18;UBERON:0005498,1.36e-08,18;UBERON:0004140,1.36e-08,18;UBERON:0009881,1.36e-08,18;UBERON:0004141,1.36e-08,18;UBERON:0003084,1.36e-08,18;UBERON:0007005,1.36e-08,18;UBERON:0004139,1.36e-08,18;UBERON:0004291,1.36e-08,18;UBERON:0003103,3.21e-08,43;UBERON:0000344,4.69e-08,15;UBERON:0001242,7.23e-07,13;UBERON:0001262,7.23e-07,13;UBERON:0004786,7.23e-07,13;UBERON:0003914,8.20e-07,47 | |||
|phase1_expression=11.3705681444404,291.743440786506,311.219479742443,429.801644267005,354.634176802014,77.728102895205,95.3139573629745,3.09895976259783,12.67098499365,11.2350972634557,3.93801326918661,3.98860794976682,5.30722262786738,2.79745287740792,14.3237197580735,12.3509913107794,11.8925519281785,2.83915948822414,3.42786084014347,5.09267582157636,19.7300433150482,15.1915155337354,22.2019820768095,297.425913972943,255.103120546693,312.956420442686,282.149107484194,205.344084749652,118.95466057969,148.949806688119,73.8362600482165,26.0362576118449,27.0628506537211,0,25.1300909183609,38.4002030778117,29.6045566580435,23.0192396905299,23.440060335714,15.1821885752402,19.4116391050235,22.5405010036287,18.934903768215,7.93149953246137,7.80602370390262,11.3798986340243,11.7358701652206,47.3114589345569,30.7560655828261,25.2758868796568,20.0180582924268,44.5632949531412,2.51673909086605,7.97898356212479,8.4023449785616,23.4106086792712,13.4670716771216,22.6895720602075,14.7691016427506,14.8117474196169,19.6487735086916,15.5868484751801,14.2287167377782,7.19919773825119,11.8663963508037,4.9733608046227,24.8668091730276,28.0479362884735,3.31806759387129,3.91517221161903,2.94454945891935,40.5624397853401,42.4067598627098,4.77714116938321,4.79227355091182,5.51531271966013,34.1359231098105,31.0280231547006,33.3326177166048,13.1886287730194,12.8082701043374,14.5855743755893,37.1313388671837,32.0774687718058,22.4613424231911,42.1318877227345,37.8708670925614,22.927131836512,17.1141196932996,16.0967423027453,13.6236309689789,43.0211938490693,68.6771047044828,40.4777393728363,68.2265238320053,75.7165439194497,143.112864114255,9.71452838694929,13.2490862347463,15.1936017039446,14.3660288172214,16.6824420638613,0,0,20.5666488960653,23.055747758234,22.7486000256652,76.0464638928939,3.6251303710604,12.6175818205101,21.1652098654686,30.142082352902,17.7573932887165,22.759118723446,15.521709341913,33.5529798850234,15.3260879995312,140.984372996914,59.2689069806416,47.7212207344857,109.758234674816,80.0044167673117,82.0123749359738,19.6163133997737,14.6612694769419,235.020490791904,10.4239158320151,19.196887391789,13.4694440697449,21.12048015608,22.4175295381127,6.15706325353036,16.6871347384585,14.3200656104985,32.6227229958509,19.3067103050632,9.980257657331,50.2604161264776,6.82351447770922,40.8257200419759,13.9228873970093,11.2652031172402,12.0641626969584,9.94651797715719,7.55205140579739,12.811372028485,11.3379086717272,46.8253101037618,15.9520314770303,9.07709184805532,7.2139960907219,8.11024209982027,6.39508673218875,9.4028084960985,8.0255033199098,7.76233640592123,30.1951670544691,26.7641823399304,15.344828967362,76.2222842930647,79.2698082736105,86.6098515627481,91.1467232003059,123.371173305622,141.462942517726,186.259689745077,204.15605846511,178.417443137035,200.763016894446,355.422559731241,433.231718213053,563.454751537231,526.920276698522,485.290410237504,14.5100064509248,5.45394445610208,576.580776306727,329.240955496113,13.4371597837197,13.237490296045,16.2373001265838,28.0340099226446,32.0224383136613,35.0015152047109,178.422927140736,56.3270425156117,34.6842588144372,33.2257308308722,34.118715245846,162.686312966414,175.071820398502,210.492325829866,27.3121777372438,15.6520462275328,18.0332377076929,35.63898237293,33.5537802799993,27.5633772168952,31.2388493393831,60.3725505236573,63.8984822314395,61.2049933052131,64.9231253320856,14.8492144087324,18.2799865455279,20.012728002252,11.7658870405332,16.4000468631643,20.3700681425136,17.2617682470486,20.2669033468794,24.7105271869273,24.4405951096503,22.3284568601102,34.3241440426017,45.7167769084272,76.7820929873784,100.830695964944,8.31389355749721,16.6752442358027,10.2667935158476,11.2031756611624,8.91822943496308,12.730475565578,14.0445748122748,10.9274842800367,11.1920952315396,9.96591103419487,9.08892181347676,14.7476983244164,13.6421135674058,7.5217510462386,7.53956419696361,13.053736411649,20.1623351937805,20.9711927191597,34.6789274373631,32.3504254994481,21.4754778443445,386.785460477099,22.085575359138,24.9880796349849,19.8189525914175,11.4705023017225,12.2539270745317,12.1722908239198,17.8116708736954,17.82760733259,13.8350722281283,17.3513510867776,15.1875891172847,15.4917075190512,10.4247653986289,12.0428189769951,2.65490276679926,12.1390318077491,16.3254720760966,13.013750503157,16.5369060013233,10.7602301780375,19.3821219876166,6.90714086007261,9.9819265947722,8.84902922220285,9.48767477174989,4.12542172992747,7.14923172082955,11.8840322060665,17.5927809944546,14.5749183821483,18.2660440651542,12.4858172321449,13.3284706687718,15.22324745573,19.7124234773517,18.0057260234247,10.1443063105282,26.5466867235783,13.4015474157602,12.1832108354875,10.8628833042854,7.2221995887827,132.332299829952,28.9263471136395,11.9609616558497,9.28740905834501,9.07453184111587,8.2882121082064,8.20165366326151,6.86334519619568,7.13909405974192,10.4963589242744,8.56839837587428,83.0563437673149,11.5462637657114,11.7925290933572,14.3647103292996,14.8452690170273,21.1811686833792,21.848024114341,18.2664137152992,62.036158250215,20.3495508068115,16.776161453347,9.58277995763124,11.3632574993424,13.567596217482,12.444876054019,17.4365761694937,9.46154302748358,9.50593633030607,7.68205870579306,10.3810750981454,4.83168241652012,30.2431506570759,8.53230025696081,19.2588954525656,15.3039326175593,12.9920822977795,10.2045216530464,8.94066096515692,7.69250876927801,7.08909730437971,9.08698049533329,5.86792411243499,6.75535440416831,6.04238860586465,4.52195655709548,5.14258369598903,380.453583706325,17.5368903165511,30.5027112472217,17.2921154855001,12.7505132061246,13.3254557570339,11.721703953105,15.6488916727718,6.52043735245972,24.8490810751509,32.2227665555024,29.2176711854092,25.7779773515531,22.6077231524312,17.3740596399631,20.2506750069542,16.6618845192962,13.5942722695261,19.1571315348173,15.9832515279632,12.369771075432,11.2684179797729,11.6691224192781,13.8344687334468,26.8411522337021,49.5610202997602,51.7147993669624,43.3240932948951,38.9153706116248,53.9910908766211,45.0816955912722,32.7745276144588,38.7352172049459,36.6438291936813,40.4849637590613,36.1559096947949,31.6371121560476,42.8569336835439,44.3068749604536,48.0016953339582,45.0788547644717,39.5804075312553,42.4411536566399,36.138002079487,38.7534904143878,43.3539295708471,46.826408635936,35.3090695999241,68.4593571422441,35.7091404553764,35.3631091728273,37.6492559716114,38.5792734553055,32.9870304777752,23.9818154820428,42.3416211286189,53.0731503499297,74.9850261709866,95.0749016405112,113.847107289627 | |||
|short_description=p4@Mdh2 | |||
}} |
Latest revision as of 13:34, 25 September 2015
Short description: | p4@Mdh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mdh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:635 |
Association with transcript: | -9bp_to_ENSMUST00000143747_5end |
EntrezGene: | Mdh2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.51e-10 | 31 |
primary circulatory organ | 1.36e-08 | 18 |
heart | 1.36e-08 | 18 |
primitive heart tube | 1.36e-08 | 18 |
primary heart field | 1.36e-08 | 18 |
anterior lateral plate mesoderm | 1.36e-08 | 18 |
heart tube | 1.36e-08 | 18 |
heart primordium | 1.36e-08 | 18 |
cardiac mesoderm | 1.36e-08 | 18 |
cardiogenic plate | 1.36e-08 | 18 |
heart rudiment | 1.36e-08 | 18 |
compound organ | 3.21e-08 | 43 |
mucosa | 4.69e-08 | 15 |
intestinal mucosa | 7.23e-07 | 13 |
wall of intestine | 7.23e-07 | 13 |
gastrointestinal system mucosa | 7.23e-07 | 13 |
epithelial tube | 8.20e-07 | 47 |