FFCP PHASE1:Mm9::chr5:114724254..114724278,-: Difference between revisions
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{{FFCP|EntrezGene=116810|HGNC=|MCL_coexpression_id=53|UniProt=Q8K3Q3|association_with_transcript=-438bp_to_ENSMUST00000044790_5end|description=CAGE_peak_4_at_Foxn4_5end|id=chr5:114724254..114724278,-|ontology_enrichment_celltype=CL:0002453!4.86e-13!8;CL:0000333!2.65e-10!10;CL:0000095!2.65e-10!10;CL:0000243!2.65e-10!10;CL:0000123!2.65e-10!10;CL:0000125!2.65e-10!10;CL:0000030!2.65e-10!10;CL:0000339!2.65e-10!10;CL:0000128!3.12e-08!6;CL:0000126!3.12e-08!6;CL:0000127!3.12e-08!6;CL:0000864!6.94e-07!2;CL:0000878!6.94e-07!2;CL:0000129!6.94e-07!2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.20e-17!9;UBERON:0000019!5.20e-17!9;UBERON:0000047!5.20e-17!9;UBERON:0004088!5.20e-17!9;UBERON:0002104!5.20e-17!9;UBERON:0001456!5.20e-17!9;UBERON:0003072!5.20e-17!9;UBERON:0003071!5.20e-17!9;UBERON:0004128!5.20e-17!9;UBERON:0001444!1.01e-13!11;UBERON:0000020!1.72e-12!12;UBERON:0001032!1.72e-12!12;UBERON:0004456!1.72e-12!12;UBERON:0005085!1.90e-11!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.40e-22,9;UBERON:0000019,1.40e-22,9;UBERON:0000047,1.40e-22,9;UBERON:0010312,1.40e-22,9;UBERON:0004088,1.40e-22,9;UBERON:0002104,1.40e-22,9;UBERON:0001456,1.40e-22,9;UBERON:0003072,1.40e-22,9;UBERON:0004128,1.40e-22,9;UBERON:0003071,1.40e-22,9;UBERON:0001444,1.15e-18,11;UBERON:0000020,3.40e-17,12;UBERON:0001032,3.40e-17,12;UBERON:0004456,3.40e-17,12;UBERON:0000033,5.98e-16,13;UBERON:0005085,5.98e-16,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650602214813519,0.919608417733892,0.900310649026746,1.35634336052144,2.58538696775046,2.43416068541215,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Foxn4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=116810 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3Q3 | |||
|association_with_transcript=-438bp_to_ENSMUST00000044790_5end | |||
|cluster_id=chr5:114724254..114724278,- | |||
|description=CAGE_peak_4_at_Foxn4_5end | |||
|id=chr5:114724254..114724278,- | |||
|ontology_enrichment_celltype=CL:0002453!4.86e-13!8;CL:0000333!2.65e-10!10;CL:0000095!2.65e-10!10;CL:0000243!2.65e-10!10;CL:0000123!2.65e-10!10;CL:0000125!2.65e-10!10;CL:0000030!2.65e-10!10;CL:0000339!2.65e-10!10;CL:0000128!3.12e-08!6;CL:0000126!3.12e-08!6;CL:0000127!3.12e-08!6;CL:0000864!6.94e-07!2;CL:0000878!6.94e-07!2;CL:0000129!6.94e-07!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.20e-17!9;UBERON:0000019!5.20e-17!9;UBERON:0000047!5.20e-17!9;UBERON:0004088!5.20e-17!9;UBERON:0002104!5.20e-17!9;UBERON:0001456!5.20e-17!9;UBERON:0003072!5.20e-17!9;UBERON:0003071!5.20e-17!9;UBERON:0004128!5.20e-17!9;UBERON:0001444!1.01e-13!11;UBERON:0000020!1.72e-12!12;UBERON:0001032!1.72e-12!12;UBERON:0004456!1.72e-12!12;UBERON:0005085!1.90e-11!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.40e-22,9;UBERON:0000019,1.40e-22,9;UBERON:0000047,1.40e-22,9;UBERON:0010312,1.40e-22,9;UBERON:0004088,1.40e-22,9;UBERON:0002104,1.40e-22,9;UBERON:0001456,1.40e-22,9;UBERON:0003072,1.40e-22,9;UBERON:0004128,1.40e-22,9;UBERON:0003071,1.40e-22,9;UBERON:0001444,1.15e-18,11;UBERON:0000020,3.40e-17,12;UBERON:0001032,3.40e-17,12;UBERON:0004456,3.40e-17,12;UBERON:0000033,5.98e-16,13;UBERON:0005085,5.98e-16,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650602214813519,0.919608417733892,0.900310649026746,1.35634336052144,2.58538696775046,2.43416068541215,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Foxn4 | |||
}} |
Latest revision as of 16:30, 1 October 2015
Short description: | p4@Foxn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Foxn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | -438bp_to_ENSMUST00000044790_5end |
EntrezGene: | Foxn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.40e-22 | 9 |
camera-type eye | 1.40e-22 | 9 |
simple eye | 1.40e-22 | 9 |
immature eye | 1.40e-22 | 9 |
ocular region | 1.40e-22 | 9 |
visual system | 1.40e-22 | 9 |
face | 1.40e-22 | 9 |
optic cup | 1.40e-22 | 9 |
optic vesicle | 1.40e-22 | 9 |
eye primordium | 1.40e-22 | 9 |
subdivision of head | 1.15e-18 | 11 |
sense organ | 3.40e-17 | 12 |
sensory system | 3.40e-17 | 12 |
entire sense organ system | 3.40e-17 | 12 |
head | 5.98e-16 | 13 |
ectodermal placode | 5.98e-16 | 13 |