FFCP PHASE1:Mm9::chr4:151852285..151852292,+: Difference between revisions
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{{FFCP|EntrezGene=260305|HGNC=|MCL_coexpression_id=1874|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153759_5end|description=CAGE_peak_3_at_Nphp4_5end|id=chr4:151852285..151852292,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.26e-09,8;CL:0000333,4.95e-07,10;CL:0000095,4.95e-07,10;CL:0000243,4.95e-07,10;CL:0000123,4.95e-07,10;CL:0000125,4.95e-07,10;CL:0000030,4.95e-07,10;CL:0000339,4.95e-07,10;CL:0000128,9.47e-07,6;CL:0000126,9.47e-07,6;CL:0000127,9.47e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.39e-19!71;UBERON:0003075!2.39e-19!71;UBERON:0007284!2.39e-19!71;UBERON:0000033!1.43e-17!63;UBERON:0004121!1.46e-17!102;UBERON:0000924!1.46e-17!102;UBERON:0006601!1.46e-17!102;UBERON:0001017!4.28e-17!73;UBERON:0005743!4.28e-17!73;UBERON:0003056!1.19e-16!49;UBERON:0000073!1.66e-16!75;UBERON:0001016!1.66e-16!75;UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0001049!1.46e-14!52;UBERON:0005068!1.46e-14!52;UBERON:0006241!1.46e-14!52;UBERON:0007135!1.46e-14!52;UBERON:0002616!4.86e-14!49;UBERON:0003080!5.55e-13!40;UBERON:0002780!1.63e-12!39;UBERON:0001890!1.63e-12!39;UBERON:0006240!1.63e-12!39;UBERON:0007811!3.58e-11!86;UBERON:0000153!2.95e-10!94;UBERON:0002619!9.84e-08!17;UBERON:0002791!1.26e-07!29;UBERON:0003528!1.26e-07!29;UBERON:0001893!1.26e-07!29;UBERON:0002021!1.92e-07!10;UBERON:0000411!1.92e-07!10;UBERON:0001950!1.92e-07!10;UBERON:0000956!7.37e-07!21;UBERON:0001869!7.37e-07!21;UBERON:0000203!7.37e-07!21;UBERON:0002020!7.42e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.30e-29,49;UBERON:0000955,1.22e-28,47;UBERON:0006238,1.22e-28,47;UBERON:0002346,2.47e-28,64;UBERON:0003075,2.47e-28,64;UBERON:0007284,2.47e-28,64;UBERON:0004121,9.87e-28,95;UBERON:0000924,9.87e-28,95;UBERON:0006601,9.87e-28,95;UBERON:0002616,1.50e-27,46;UBERON:0001017,3.35e-27,73;UBERON:0001016,4.15e-26,75;UBERON:0010371,6.51e-26,73;UBERON:0001049,1.22e-24,52;UBERON:0005068,1.22e-24,52;UBERON:0006241,1.22e-24,52;UBERON:0007135,1.22e-24,52;UBERON:0003080,4.94e-24,40;UBERON:0002780,4.31e-23,39;UBERON:0001890,4.31e-23,39;UBERON:0006240,4.31e-23,39;UBERON:0000073,7.89e-22,54;UBERON:0010314,5.95e-21,92;UBERON:0003528,4.84e-14,29;UBERON:0002791,4.84e-14,29;UBERON:0001893,4.84e-14,29;UBERON:0002619,8.23e-14,17;UBERON:0002021,2.05e-13,10;UBERON:0000411,2.05e-13,10;UBERON:0001950,2.05e-13,10;UBERON:0000956,2.96e-12,21;UBERON:0001869,2.96e-12,21;UBERON:0000203,2.96e-12,21;UBERON:0002020,4.30e-11,34;UBERON:0001894,1.58e-10,10;UBERON:0006222,1.58e-10,10;UBERON:0000025,2.03e-08,114;UBERON:0004111,2.27e-08,122;UBERON:0000007,3.26e-08,8;UBERON:0003296,3.26e-08,8;UBERON:0010133,3.26e-08,8;UBERON:0000020,5.77e-07,12;UBERON:0001032,5.77e-07,12;UBERON:0004456,5.77e-07,12|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0.274228867211478,0.42438965179803,2.72138528483423,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.755380907853464,0.405507724878058,0.734187008646726,1.56478268869608,1.09012578190223,2.63623419281366,1.36100929351998,1.39986421625363,2.87505128729943,0.167782606057736,0,0,0.771778308107841,1.14613375975503,0,1.01158230429799,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0,0.988866362566974,2.1314403448383,2.69640099466564,6.53171119046643,0.311068836925433,0.405017814995072,0,0,0.220868540951614,0.367472397644862,0.479227355091182,0,0,0.255374676170375,0.614426133024974,0.395658863190582,1.09785172322892,2.08365348222704,0.279182999001381,1.12552522006336,2.13917546887534,0.589257170947335,0.996601765593721,0.372798891650601,0.075726193333184,0.377857800533928,0.579728977403356,0,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0,0.253359865475099,0,0.79928715803342,0,0.890652834388949,0.520455980298408,1.21786191324856,1.38369298353635,0.452167921657868,0.705532242814229,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0,0,0,1.64769703345305,0,1.63350657746724,4.69325664519146,6.39288643325826,2.90903262383384,3.0825839982874,0.407357455401265,0.497627882440372,1.0108910337347,0.420883711772948,1.43132487258974,1.60931473103431,0.720248519221397,1.80845781402858,2.31324097114515,2.3060469651273,2.06143794031403,3.10444044886819,0,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0,0,0.822799249567402,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,6.30869845692382,2.26390147234426,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.4940968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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=260305 | |||
|HGNC= | |||
|MCL_coexpression_id=1874 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000153759_5end | |||
|cluster_id=chr4:151852285..151852292,+ | |||
|description=CAGE_peak_3_at_Nphp4_5end | |||
|id=chr4:151852285..151852292,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.26e-09,8;CL:0000333,4.95e-07,10;CL:0000095,4.95e-07,10;CL:0000243,4.95e-07,10;CL:0000123,4.95e-07,10;CL:0000125,4.95e-07,10;CL:0000030,4.95e-07,10;CL:0000339,4.95e-07,10;CL:0000128,9.47e-07,6;CL:0000126,9.47e-07,6;CL:0000127,9.47e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.39e-19!71;UBERON:0003075!2.39e-19!71;UBERON:0007284!2.39e-19!71;UBERON:0000033!1.43e-17!63;UBERON:0004121!1.46e-17!102;UBERON:0000924!1.46e-17!102;UBERON:0006601!1.46e-17!102;UBERON:0001017!4.28e-17!73;UBERON:0005743!4.28e-17!73;UBERON:0003056!1.19e-16!49;UBERON:0000073!1.66e-16!75;UBERON:0001016!1.66e-16!75;UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0001049!1.46e-14!52;UBERON:0005068!1.46e-14!52;UBERON:0006241!1.46e-14!52;UBERON:0007135!1.46e-14!52;UBERON:0002616!4.86e-14!49;UBERON:0003080!5.55e-13!40;UBERON:0002780!1.63e-12!39;UBERON:0001890!1.63e-12!39;UBERON:0006240!1.63e-12!39;UBERON:0007811!3.58e-11!86;UBERON:0000153!2.95e-10!94;UBERON:0002619!9.84e-08!17;UBERON:0002791!1.26e-07!29;UBERON:0003528!1.26e-07!29;UBERON:0001893!1.26e-07!29;UBERON:0002021!1.92e-07!10;UBERON:0000411!1.92e-07!10;UBERON:0001950!1.92e-07!10;UBERON:0000956!7.37e-07!21;UBERON:0001869!7.37e-07!21;UBERON:0000203!7.37e-07!21;UBERON:0002020!7.42e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.30e-29,49;UBERON:0000955,1.22e-28,47;UBERON:0006238,1.22e-28,47;UBERON:0002346,2.47e-28,64;UBERON:0003075,2.47e-28,64;UBERON:0007284,2.47e-28,64;UBERON:0004121,9.87e-28,95;UBERON:0000924,9.87e-28,95;UBERON:0006601,9.87e-28,95;UBERON:0002616,1.50e-27,46;UBERON:0001017,3.35e-27,73;UBERON:0001016,4.15e-26,75;UBERON:0010371,6.51e-26,73;UBERON:0001049,1.22e-24,52;UBERON:0005068,1.22e-24,52;UBERON:0006241,1.22e-24,52;UBERON:0007135,1.22e-24,52;UBERON:0003080,4.94e-24,40;UBERON:0002780,4.31e-23,39;UBERON:0001890,4.31e-23,39;UBERON:0006240,4.31e-23,39;UBERON:0000073,7.89e-22,54;UBERON:0010314,5.95e-21,92;UBERON:0003528,4.84e-14,29;UBERON:0002791,4.84e-14,29;UBERON:0001893,4.84e-14,29;UBERON:0002619,8.23e-14,17;UBERON:0002021,2.05e-13,10;UBERON:0000411,2.05e-13,10;UBERON:0001950,2.05e-13,10;UBERON:0000956,2.96e-12,21;UBERON:0001869,2.96e-12,21;UBERON:0000203,2.96e-12,21;UBERON:0002020,4.30e-11,34;UBERON:0001894,1.58e-10,10;UBERON:0006222,1.58e-10,10;UBERON:0000025,2.03e-08,114;UBERON:0004111,2.27e-08,122;UBERON:0000007,3.26e-08,8;UBERON:0003296,3.26e-08,8;UBERON:0010133,3.26e-08,8;UBERON:0000020,5.77e-07,12;UBERON:0001032,5.77e-07,12;UBERON:0004456,5.77e-07,12 | |||
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|short_description=p3@Nphp4 | |||
}} |
Latest revision as of 19:10, 26 September 2015
Short description: | p3@Nphp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nphp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1874 |
Association with transcript: | 0bp_to_ENSMUST00000153759_5end |
EntrezGene: | Nphp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.26e-09 | 8 |
migratory neural crest cell | 4.95e-07 | 10 |
neuron associated cell | 4.95e-07 | 10 |
glial cell (sensu Vertebrata) | 4.95e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.95e-07 | 10 |
glial cell | 4.95e-07 | 10 |
glioblast | 4.95e-07 | 10 |
glioblast (sensu Vertebrata) | 4.95e-07 | 10 |
oligodendrocyte | 9.47e-07 | 6 |
macroglial cell | 9.47e-07 | 6 |
astrocyte | 9.47e-07 | 6 |