FFCP PHASE1:Mm9::chr4:148961352..148961383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=65945|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137232_5end|description=CAGE_peak_6_at_Clstn1_5end|id=chr4:148961352..148961383,+|ontology_enrichment_celltype=CL:0000117!6.42e-09!23;CL:0000337!6.42e-09!23|ontology_enrichment_celltype_v019_2=CL:0002610,4.58e-10,3;CL:0002614,1.29e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.62e-27!52;UBERON:0005068!9.62e-27!52;UBERON:0006241!9.62e-27!52;UBERON:0007135!9.62e-27!52;UBERON:0000955!5.95e-25!50;UBERON:0006238!5.95e-25!50;UBERON:0001017!3.85e-24!73;UBERON:0005743!3.85e-24!73;UBERON:0002616!5.77e-24!49;UBERON:0000073!3.66e-23!75;UBERON:0001016!3.66e-23!75;UBERON:0002020!1.46e-22!34;UBERON:0000033!1.36e-21!63;UBERON:0002346!1.37e-21!71;UBERON:0003075!1.37e-21!71;UBERON:0007284!1.37e-21!71;UBERON:0004121!9.48e-19!102;UBERON:0000924!9.48e-19!102;UBERON:0006601!9.48e-19!102;UBERON:0007811!8.35e-18!86;UBERON:0002791!2.40e-17!29;UBERON:0003528!2.40e-17!29;UBERON:0001893!2.40e-17!29;UBERON:0003080!2.19e-15!40;UBERON:0000153!2.86e-15!94;UBERON:0003056!1.04e-14!49;UBERON:0002021!1.87e-14!10;UBERON:0000411!1.87e-14!10;UBERON:0001950!1.87e-14!10;UBERON:0002780!3.05e-14!39;UBERON:0001890!3.05e-14!39;UBERON:0006240!3.05e-14!39;UBERON:0003076!3.95e-13!12;UBERON:0003057!3.95e-13!12;UBERON:0002619!1.25e-12!17;UBERON:0000956!2.56e-11!21;UBERON:0001869!2.56e-11!21;UBERON:0000203!2.56e-11!21;UBERON:0002298!8.06e-10!6;UBERON:0002240!3.94e-08!6;UBERON:0005174!3.94e-08!6;UBERON:0001137!3.94e-08!6;UBERON:0000025!9.09e-08!114;UBERON:0000064!1.01e-07!99;UBERON:0002420!1.98e-07!8;UBERON:0007245!1.98e-07!8;UBERON:0010009!1.98e-07!8;UBERON:0010011!1.98e-07!8;UBERON:0000454!1.98e-07!8;UBERON:0002950!7.38e-07!4;UBERON:0001891!7.38e-07!4;UBERON:0009616!7.38e-07!4;UBERON:0001948!9.80e-07!5;UBERON:0002315!9.80e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0001049,1.37e-34,52;UBERON:0005068,1.37e-34,52;UBERON:0006241,1.37e-34,52;UBERON:0007135,1.37e-34,52;UBERON:0002616,2.42e-33,46;UBERON:0000955,1.56e-32,47;UBERON:0006238,1.56e-32,47;UBERON:0001017,4.10e-30,73;UBERON:0001016,3.56e-29,75;UBERON:0002021,1.49e-28,10;UBERON:0000411,1.49e-28,10;UBERON:0001950,1.49e-28,10;UBERON:0002346,3.52e-27,64;UBERON:0003075,3.52e-27,64;UBERON:0007284,3.52e-27,64;UBERON:0003528,3.95e-26,29;UBERON:0002791,3.95e-26,29;UBERON:0001893,3.95e-26,29;UBERON:0003080,6.08e-26,40;UBERON:0002020,1.73e-24,34;UBERON:0002780,1.07e-23,39;UBERON:0001890,1.07e-23,39;UBERON:0006240,1.07e-23,39;UBERON:0010371,3.24e-23,73;UBERON:0002619,7.36e-23,17;UBERON:0004121,5.99e-22,95;UBERON:0000924,5.99e-22,95;UBERON:0006601,5.99e-22,95;UBERON:0000956,1.78e-21,21;UBERON:0001869,1.78e-21,21;UBERON:0000203,1.78e-21,21;UBERON:0003056,2.05e-20,49;UBERON:0010314,2.20e-17,92;UBERON:0000025,4.76e-13,114;UBERON:0002950,1.19e-12,4;UBERON:0001891,1.19e-12,4;UBERON:0009616,1.19e-12,4;UBERON:0010286,1.19e-12,4;UBERON:0004111,7.41e-12,122;UBERON:0004684,4.58e-10,3;UBERON:0002275,4.58e-10,3;UBERON:0002038,1.29e-09,3;UBERON:0009663,1.29e-09,3;UBERON:0009661,1.29e-09,3;UBERON:0000125,1.29e-09,3;UBERON:0002308,1.29e-09,3;UBERON:0003076,8.47e-09,12;UBERON:0003057,8.47e-09,12;UBERON:0004733,1.25e-08,6;UBERON:0004732,1.25e-08,6;UBERON:0002028,1.25e-08,6;UBERON:0007277,1.25e-08,6;UBERON:0011216,5.26e-08,194;UBERON:0001896,7.99e-08,2;UBERON:0002298,7.99e-08,2;UBERON:0005290,7.99e-08,2;UBERON:0010096,7.99e-08,2;UBERON:0000483,9.26e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.09843091367236,1.55543919259427,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0,0,2.20231761998777,3.95830748064082,4.45458946443106,0.131886287730194,0.274462930807229,0,3.07101298901519,2.25105044012672,3.0559649555362,0.294628585473668,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,4.6435098215495,1.37250180845588,0.125654352112864,3.65031072403781,3.3243009452943,4.36354893575076,1.78465389374533,0,0,0,0.420883711772948,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,5.45872005958493,4.92289083687253,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,3.43737308063638,1.03111909406213,3.42541259885321,3.7769694869485,2.02506750069542,2.2516060161211,2.26571204492102,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Clstn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=65945 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137232_5end | |||
|cluster_id=chr4:148961352..148961383,+ | |||
|description=CAGE_peak_6_at_Clstn1_5end | |||
|id=chr4:148961352..148961383,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.42e-09!23;CL:0000337!6.42e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.58e-10,3;CL:0002614,1.29e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.62e-27!52;UBERON:0005068!9.62e-27!52;UBERON:0006241!9.62e-27!52;UBERON:0007135!9.62e-27!52;UBERON:0000955!5.95e-25!50;UBERON:0006238!5.95e-25!50;UBERON:0001017!3.85e-24!73;UBERON:0005743!3.85e-24!73;UBERON:0002616!5.77e-24!49;UBERON:0000073!3.66e-23!75;UBERON:0001016!3.66e-23!75;UBERON:0002020!1.46e-22!34;UBERON:0000033!1.36e-21!63;UBERON:0002346!1.37e-21!71;UBERON:0003075!1.37e-21!71;UBERON:0007284!1.37e-21!71;UBERON:0004121!9.48e-19!102;UBERON:0000924!9.48e-19!102;UBERON:0006601!9.48e-19!102;UBERON:0007811!8.35e-18!86;UBERON:0002791!2.40e-17!29;UBERON:0003528!2.40e-17!29;UBERON:0001893!2.40e-17!29;UBERON:0003080!2.19e-15!40;UBERON:0000153!2.86e-15!94;UBERON:0003056!1.04e-14!49;UBERON:0002021!1.87e-14!10;UBERON:0000411!1.87e-14!10;UBERON:0001950!1.87e-14!10;UBERON:0002780!3.05e-14!39;UBERON:0001890!3.05e-14!39;UBERON:0006240!3.05e-14!39;UBERON:0003076!3.95e-13!12;UBERON:0003057!3.95e-13!12;UBERON:0002619!1.25e-12!17;UBERON:0000956!2.56e-11!21;UBERON:0001869!2.56e-11!21;UBERON:0000203!2.56e-11!21;UBERON:0002298!8.06e-10!6;UBERON:0002240!3.94e-08!6;UBERON:0005174!3.94e-08!6;UBERON:0001137!3.94e-08!6;UBERON:0000025!9.09e-08!114;UBERON:0000064!1.01e-07!99;UBERON:0002420!1.98e-07!8;UBERON:0007245!1.98e-07!8;UBERON:0010009!1.98e-07!8;UBERON:0010011!1.98e-07!8;UBERON:0000454!1.98e-07!8;UBERON:0002950!7.38e-07!4;UBERON:0001891!7.38e-07!4;UBERON:0009616!7.38e-07!4;UBERON:0001948!9.80e-07!5;UBERON:0002315!9.80e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0001049,1.37e-34,52;UBERON:0005068,1.37e-34,52;UBERON:0006241,1.37e-34,52;UBERON:0007135,1.37e-34,52;UBERON:0002616,2.42e-33,46;UBERON:0000955,1.56e-32,47;UBERON:0006238,1.56e-32,47;UBERON:0001017,4.10e-30,73;UBERON:0001016,3.56e-29,75;UBERON:0002021,1.49e-28,10;UBERON:0000411,1.49e-28,10;UBERON:0001950,1.49e-28,10;UBERON:0002346,3.52e-27,64;UBERON:0003075,3.52e-27,64;UBERON:0007284,3.52e-27,64;UBERON:0003528,3.95e-26,29;UBERON:0002791,3.95e-26,29;UBERON:0001893,3.95e-26,29;UBERON:0003080,6.08e-26,40;UBERON:0002020,1.73e-24,34;UBERON:0002780,1.07e-23,39;UBERON:0001890,1.07e-23,39;UBERON:0006240,1.07e-23,39;UBERON:0010371,3.24e-23,73;UBERON:0002619,7.36e-23,17;UBERON:0004121,5.99e-22,95;UBERON:0000924,5.99e-22,95;UBERON:0006601,5.99e-22,95;UBERON:0000956,1.78e-21,21;UBERON:0001869,1.78e-21,21;UBERON:0000203,1.78e-21,21;UBERON:0003056,2.05e-20,49;UBERON:0010314,2.20e-17,92;UBERON:0000025,4.76e-13,114;UBERON:0002950,1.19e-12,4;UBERON:0001891,1.19e-12,4;UBERON:0009616,1.19e-12,4;UBERON:0010286,1.19e-12,4;UBERON:0004111,7.41e-12,122;UBERON:0004684,4.58e-10,3;UBERON:0002275,4.58e-10,3;UBERON:0002038,1.29e-09,3;UBERON:0009663,1.29e-09,3;UBERON:0009661,1.29e-09,3;UBERON:0000125,1.29e-09,3;UBERON:0002308,1.29e-09,3;UBERON:0003076,8.47e-09,12;UBERON:0003057,8.47e-09,12;UBERON:0004733,1.25e-08,6;UBERON:0004732,1.25e-08,6;UBERON:0002028,1.25e-08,6;UBERON:0007277,1.25e-08,6;UBERON:0011216,5.26e-08,194;UBERON:0001896,7.99e-08,2;UBERON:0002298,7.99e-08,2;UBERON:0005290,7.99e-08,2;UBERON:0010096,7.99e-08,2;UBERON:0000483,9.26e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.09843091367236,1.55543919259427,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0,0,2.20231761998777,3.95830748064082,4.45458946443106,0.131886287730194,0.274462930807229,0,3.07101298901519,2.25105044012672,3.0559649555362,0.294628585473668,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,4.6435098215495,1.37250180845588,0.125654352112864,3.65031072403781,3.3243009452943,4.36354893575076,1.78465389374533,0,0,0,0.420883711772948,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,5.45872005958493,4.92289083687253,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,3.43737308063638,1.03111909406213,3.42541259885321,3.7769694869485,2.02506750069542,2.2516060161211,2.26571204492102,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Clstn1 | |||
}} |
Latest revision as of 17:44, 26 September 2015
Short description: | p6@Clstn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Clstn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000137232_5end |
EntrezGene: | Clstn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.58e-10 | 3 |
neuron of the substantia nigra | 1.29e-09 | 3 |