FFCP PHASE1:Mm9::chr4:147504992..147505004,+: Difference between revisions
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{{FFCP|EntrezGene=71890|HGNC=|MCL_coexpression_id=52|UniProt=Q9D752|association_with_transcript=-19bp_to_ENSMUST00000084129_5end|description=CAGE_peak_8_at_Mad2l2_5end|id=chr4:147504992..147505004,+|ontology_enrichment_celltype=CL:0000221!6.46e-11!44;CL:0000133!6.46e-11!44;CL:0002319!1.03e-10!43;CL:0000540!1.16e-08!33;CL:0000047!1.16e-08!33;CL:0000031!1.16e-08!33;CL:0000404!1.16e-08!33;CL:0000055!1.65e-07!50|ontology_enrichment_celltype_v019_2=CL:0002319,3.19e-15,43;CL:0000221,9.87e-15,44;CL:0000133,9.87e-15,44;CL:0000540,3.90e-14,33;CL:0000047,3.90e-14,33;CL:0000031,3.90e-14,33;CL:0000404,3.90e-14,33;CL:0000393,3.61e-11,39;CL:0000211,3.61e-11,39;CL:0002321,3.60e-10,70;CL:0000117,2.97e-08,23;CL:0000337,2.97e-08,23;CL:0002293,6.50e-07,3;CL:0002609,7.22e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.17e-10!102;UBERON:0000924!3.17e-10!102;UBERON:0006601!3.17e-10!102;UBERON:0002346!1.87e-09!71;UBERON:0003075!1.87e-09!71;UBERON:0007284!1.87e-09!71;UBERON:0001017!6.25e-09!73;UBERON:0005743!6.25e-09!73;UBERON:0000073!2.85e-08!75;UBERON:0001016!2.85e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.02e-12,95;UBERON:0000924,4.02e-12,95;UBERON:0006601,4.02e-12,95;UBERON:0002346,2.87e-11,64;UBERON:0003075,2.87e-11,64;UBERON:0007284,2.87e-11,64;UBERON:0001017,4.20e-10,73;UBERON:0010371,5.38e-10,73;UBERON:0001016,1.20e-09,75;UBERON:0000970,3.23e-08,9;UBERON:0000019,3.23e-08,9;UBERON:0000047,3.23e-08,9;UBERON:0010312,3.23e-08,9;UBERON:0004088,3.23e-08,9;UBERON:0002104,3.23e-08,9;UBERON:0001456,3.23e-08,9;UBERON:0003072,3.23e-08,9;UBERON:0004128,3.23e-08,9;UBERON:0003071,3.23e-08,9;UBERON:0003056,9.39e-08,49;UBERON:0000020,1.31e-07,12;UBERON:0001032,1.31e-07,12;UBERON:0004456,1.31e-07,12;UBERON:0010314,3.21e-07,92;UBERON:0000033,6.57e-07,13;UBERON:0005085,6.57e-07,13|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.18025156380447,0.878744730937887,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.82084814773638,3.70293685490423,0,0,0,0,0,0,0.599200221036809,1.15265491596466,2.17748185847803,2.8351247049655,1.68259969081106,0.571301968807607,0.883474163806454,1.10241719293459,1.82106394934649,0,0,0,0,2.90149833006426,1.64677758484337,2.6045668527838,0,0,0,0,1.13897344639282,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,5.13305909657271,10.1922095882658,21.3320010945999,0,0,0,0,0.517875767294343,0,0.346970653532272,1.21786191324856,0.691846491768175,0.452167921657868,0.587943535678524,0,0.494389935468748,0,0,0.161766849947409,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,2.1361239859187,0.173824320192276,0,0,0.162241263067758,0,0.373220911830279,0,0,1.04096354370163,2.75882525320168,1.80062129805349,1.35634336052144,2.10913147369116,2.8185018462667,1.49922759295566,0.517406741478031,4.74249584452253,2.26927296201383,1.23165786914764,1.09597866213787,1.39023624612799,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,5.45394445610208,0,0,1.06644125267617,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0,0,0.216138049874694,0,1.89667900953082,0.571242563048644,1.1270773567308,0.407302655690628,0.387904974335251,1.1221731182451,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.947457058852424,1.14075483509418,0.339490171550376,0,0,0,0,0.472905432318573,1.10732344824387,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,1.26203287766503,1.56175497718655,2.58508077279359,0.955875191810208,0.445597348164788,0.566153061577665,2.02405350837447,2.33804686329049,1.97643888973262,0,0.709700426041343,0,0,0.494910368917606,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,0.340439605753788,1.44048875225048,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,1.15184314421485,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,1.26534397432454,0.203319467126849,0.648032044930808,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,2.07574695168353,3.19219898720825,1.02440163452481,0.729320151204882,1.46729213839588,0.367687016900028,0,0,0.64183841918363,0,0.50695859978048,0.565879024158229,0.749132059759059,0.960377286073039,0.746661096422973,0,0.811190281613988,1.35036454324594,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.658765662907314,0.930760686808441,0.73171189149109,1.05227884575137,0.950628796921032,0,0.593175090620871,0.788035859004508,0,0.464810523557898,0.771626443924566,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0|short_description=p8@Mad2l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71890 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D752 | |||
|association_with_transcript=-19bp_to_ENSMUST00000084129_5end | |||
|cluster_id=chr4:147504992..147505004,+ | |||
|description=CAGE_peak_8_at_Mad2l2_5end | |||
|id=chr4:147504992..147505004,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.46e-11!44;CL:0000133!6.46e-11!44;CL:0002319!1.03e-10!43;CL:0000540!1.16e-08!33;CL:0000047!1.16e-08!33;CL:0000031!1.16e-08!33;CL:0000404!1.16e-08!33;CL:0000055!1.65e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.19e-15,43;CL:0000221,9.87e-15,44;CL:0000133,9.87e-15,44;CL:0000540,3.90e-14,33;CL:0000047,3.90e-14,33;CL:0000031,3.90e-14,33;CL:0000404,3.90e-14,33;CL:0000393,3.61e-11,39;CL:0000211,3.61e-11,39;CL:0002321,3.60e-10,70;CL:0000117,2.97e-08,23;CL:0000337,2.97e-08,23;CL:0002293,6.50e-07,3;CL:0002609,7.22e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.17e-10!102;UBERON:0000924!3.17e-10!102;UBERON:0006601!3.17e-10!102;UBERON:0002346!1.87e-09!71;UBERON:0003075!1.87e-09!71;UBERON:0007284!1.87e-09!71;UBERON:0001017!6.25e-09!73;UBERON:0005743!6.25e-09!73;UBERON:0000073!2.85e-08!75;UBERON:0001016!2.85e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.02e-12,95;UBERON:0000924,4.02e-12,95;UBERON:0006601,4.02e-12,95;UBERON:0002346,2.87e-11,64;UBERON:0003075,2.87e-11,64;UBERON:0007284,2.87e-11,64;UBERON:0001017,4.20e-10,73;UBERON:0010371,5.38e-10,73;UBERON:0001016,1.20e-09,75;UBERON:0000970,3.23e-08,9;UBERON:0000019,3.23e-08,9;UBERON:0000047,3.23e-08,9;UBERON:0010312,3.23e-08,9;UBERON:0004088,3.23e-08,9;UBERON:0002104,3.23e-08,9;UBERON:0001456,3.23e-08,9;UBERON:0003072,3.23e-08,9;UBERON:0004128,3.23e-08,9;UBERON:0003071,3.23e-08,9;UBERON:0003056,9.39e-08,49;UBERON:0000020,1.31e-07,12;UBERON:0001032,1.31e-07,12;UBERON:0004456,1.31e-07,12;UBERON:0010314,3.21e-07,92;UBERON:0000033,6.57e-07,13;UBERON:0005085,6.57e-07,13 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.18025156380447,0.878744730937887,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.82084814773638,3.70293685490423,0,0,0,0,0,0,0.599200221036809,1.15265491596466,2.17748185847803,2.8351247049655,1.68259969081106,0.571301968807607,0.883474163806454,1.10241719293459,1.82106394934649,0,0,0,0,2.90149833006426,1.64677758484337,2.6045668527838,0,0,0,0,1.13897344639282,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,5.13305909657271,10.1922095882658,21.3320010945999,0,0,0,0,0.517875767294343,0,0.346970653532272,1.21786191324856,0.691846491768175,0.452167921657868,0.587943535678524,0,0.494389935468748,0,0,0.161766849947409,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,2.1361239859187,0.173824320192276,0,0,0.162241263067758,0,0.373220911830279,0,0,1.04096354370163,2.75882525320168,1.80062129805349,1.35634336052144,2.10913147369116,2.8185018462667,1.49922759295566,0.517406741478031,4.74249584452253,2.26927296201383,1.23165786914764,1.09597866213787,1.39023624612799,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,5.45394445610208,0,0,1.06644125267617,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0,0,0.216138049874694,0,1.89667900953082,0.571242563048644,1.1270773567308,0.407302655690628,0.387904974335251,1.1221731182451,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.947457058852424,1.14075483509418,0.339490171550376,0,0,0,0,0.472905432318573,1.10732344824387,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,1.26203287766503,1.56175497718655,2.58508077279359,0.955875191810208,0.445597348164788,0.566153061577665,2.02405350837447,2.33804686329049,1.97643888973262,0,0.709700426041343,0,0,0.494910368917606,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,0.340439605753788,1.44048875225048,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,1.15184314421485,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,1.26534397432454,0.203319467126849,0.648032044930808,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,2.07574695168353,3.19219898720825,1.02440163452481,0.729320151204882,1.46729213839588,0.367687016900028,0,0,0.64183841918363,0,0.50695859978048,0.565879024158229,0.749132059759059,0.960377286073039,0.746661096422973,0,0.811190281613988,1.35036454324594,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.658765662907314,0.930760686808441,0.73171189149109,1.05227884575137,0.950628796921032,0,0.593175090620871,0.788035859004508,0,0.464810523557898,0.771626443924566,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p8@Mad2l2 | |||
}} |
Latest revision as of 17:04, 26 September 2015
Short description: | p8@Mad2l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Mad2l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -19bp_to_ENSMUST00000084129_5end |
EntrezGene: | Mad2l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.19e-15 | 43 |
ectodermal cell | 9.87e-15 | 44 |
neurectodermal cell | 9.87e-15 | 44 |
neuron | 3.90e-14 | 33 |
neuronal stem cell | 3.90e-14 | 33 |
neuroblast | 3.90e-14 | 33 |
electrically signaling cell | 3.90e-14 | 33 |
electrically responsive cell | 3.61e-11 | 39 |
electrically active cell | 3.61e-11 | 39 |
embryonic cell | 3.60e-10 | 70 |
CNS neuron (sensu Vertebrata) | 2.97e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.97e-08 | 23 |
epithelial cell of thymus | 6.50e-07 | 3 |
neuron of cerebral cortex | 7.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.02e-12 | 95 |
ectoderm | 4.02e-12 | 95 |
presumptive ectoderm | 4.02e-12 | 95 |
neurectoderm | 2.87e-11 | 64 |
neural plate | 2.87e-11 | 64 |
presumptive neural plate | 2.87e-11 | 64 |
central nervous system | 4.20e-10 | 73 |
ecto-epithelium | 5.38e-10 | 73 |
nervous system | 1.20e-09 | 75 |
eye | 3.23e-08 | 9 |
camera-type eye | 3.23e-08 | 9 |
simple eye | 3.23e-08 | 9 |
immature eye | 3.23e-08 | 9 |
ocular region | 3.23e-08 | 9 |
visual system | 3.23e-08 | 9 |
face | 3.23e-08 | 9 |
optic cup | 3.23e-08 | 9 |
optic vesicle | 3.23e-08 | 9 |
eye primordium | 3.23e-08 | 9 |
pre-chordal neural plate | 9.39e-08 | 49 |
sense organ | 1.31e-07 | 12 |
sensory system | 1.31e-07 | 12 |
entire sense organ system | 1.31e-07 | 12 |
structure with developmental contribution from neural crest | 3.21e-07 | 92 |
head | 6.57e-07 | 13 |
ectodermal placode | 6.57e-07 | 13 |