Personal tools

FFCP PHASE1:Mm9::chr4:135242370..135242411,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=242700|HGNC=|MCL_coexpression_id=1802|UniProt=Q3URN4,Q8CGK5|association_with_transcript=0bp_to_NM_174851,uc008vgw.2_5end|description=CAGE_peak_1_at_Il28ra_5end|id=chr4:135242370..135242411,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.10e-15!59;UBERON:0000160!2.75e-13!43;UBERON:0004119!2.38e-12!130;UBERON:0000925!2.38e-12!130;UBERON:0006595!2.38e-12!130;UBERON:0001007!1.30e-11!128;UBERON:0001555!1.30e-11!128;UBERON:0007026!1.30e-11!128;UBERON:0004921!2.56e-11!126;UBERON:0004185!2.56e-11!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.21e-13,47;UBERON:0000160,2.35e-11,31;UBERON:0004119,4.44e-09,118;UBERON:0000925,4.44e-09,118;UBERON:0006595,4.44e-09,118;UBERON:0001007,2.42e-08,116;UBERON:0001555,2.42e-08,116;UBERON:0007026,2.42e-08,116;UBERON:0004921,2.43e-08,114;UBERON:0005178,1.79e-07,17;UBERON:0005181,1.79e-07,17;UBERON:0002224,1.79e-07,17;UBERON:0000915,1.79e-07,17;UBERON:0008947,1.79e-07,17;UBERON:0003258,1.79e-07,17|phase1_expression=0.480446541314382,0.697950815278722,1.36499771816861,31.7587421872172,36.5653882860833,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,1.23402990245165,0,1.02051948181284,0,0,0.799962113967033,1.37645568640302,2.29692785646008,3.87685796543167,1.07735616342945,12.9215925230334,9.07308467135751,0.665191531965914,0,0,0,0.577703239502549,1.99481574430191,0.816677425049476,23.8563029520037,17.1893775795236,15.1821885752402,30.5880373776127,36.2014107027976,27.6740901227758,0,0.304130793658544,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0,0,0,0,5.79728977403356,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,2.39433813620357,0,0,0,3.68034769719064,4.81383744402687,5.05524445014783,3.65388415100992,0.517875767294343,0,0,0,0,0,0,0,26.2026665798436,0,4.42305275974937,0,0.220841518460394,0,14.9113408974498,0,0,12.517395705221,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,1.2220723662038,1.8661045591514,1.26361379216837,1.05220927943237,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.374806898238915,2.06962696591213,0.215567992932842,0,0,0,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.930135779001631,0.536546802799238,0.934122738937356,0.658239399653922,1.14917224855367,1.78351381000883,0.730999937126662,0.658650345873152,1.61047702512446,0,0,27.755177770639,14.0158800331678,0,0.928946687441754,2.83508414908605,5.84882221407693,7.56085349072559,6.27744566171445,7.11793592316767,10.3760341476127,9.0480675168097,9.94782360205754,7.21367122340745,9.88701349519644,9.29393614461185,9.95706366271836,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,1.68325967736765,0.822074982615345,1.18088118383682,0.784993639206874,1.35736880313981,0.592905254174298,0,0,0,0,0,1.01850340712568,1.43848068725405,0.486405680325106,0.274561413188081,1.43768206527355,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,5.54259570499814,0,0.977789858652155,1.18821560042632,1.17345124144251,2.68010011906905,5.2369600994923,6.82967767502296,4.88668946729192,2.21464689648775,1.75400245523236,5.73521601505083,3.62638461918381,6.65385669474953,0,0,0.983528546038072,4.41498794087572,0.642202359951168,0.586058432961016,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.851640511249612,0.35613120733451,0.81443479676788,1.48473110675282,1.32745138339963,0.971122544619926,0.302323556964751,1.13163047853539,1.77181135728464,1.53717573971964,5.68542244970086,1.45413491791002,1.42598951353889,1.58018378967908,2.10837217149998,0,3.40439605753788,1.26042765821917,1.29358683782755,1.07168517515796,1.41872186913819,1.60531935841864,1.48094118541909,1.522324745573,2.11204537257339,3.81297727554876,3.52845436887939,6.43056386471772,1.61464426695906,1.02531972377865,0.835606408021955,1.14898629821543,12.2421951384537,0.18542530201051,1.02522528478712,2.06386867963222,1.48155621895769,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,5.72802370809068,0.474503990371703,0.609958401380546,1.62008011232702,2.29997125615916,1.09181281873089,3.37160865962052,2.89287095038676,2.87931536182433,5.70305882483889,8.69875038321696,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0.781226309063701,0.314578033277133,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0.721172697119813,0.295379054349154,0.201932899896295,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.350630706544707,2.49403421976732,1.77588762699252,0.179427713218951,0.839423081820392,2.31827512838629,3.00291960721891,2.74727436400898,2.78678892802786,3.51100472824754,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,1.55572709461131,0.824140228955577,0.64183841918363,2.02157769411038,1.2673964994512,1.88626341386076,1.21733959710847,0.832326981263301,0.976402972245426,1.90517476513229,2.20180219295225,1.35036454324594,0.824171801606613,1.32479028120958,1.37147700954166,0.532427418478012,0.238436189947321,1.59881058295561,0.752875043322645,1.26921911837515,1.09756783723664,0.526139422875686,1.22223702461276,0.561142271657738,0.711810108745045,1.28055827088233,1.63692417267876,1.08455788830176,1.35034627686799,0.749431733813838,1.40358965067245,1.50409737833809,0,0,0.231867835620421|short_description=p1@Il28ra}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242700
|HGNC=
|MCL_coexpression_id=1802
|TSSclassifier=NA
|UniProt=Q3URN4,Q8CGK5
|association_with_transcript=0bp_to_NM_174851,uc008vgw.2_5end
|cluster_id=chr4:135242370..135242411,+
|description=CAGE_peak_1_at_Il28ra_5end
|id=chr4:135242370..135242411,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.10e-15!59;UBERON:0000160!2.75e-13!43;UBERON:0004119!2.38e-12!130;UBERON:0000925!2.38e-12!130;UBERON:0006595!2.38e-12!130;UBERON:0001007!1.30e-11!128;UBERON:0001555!1.30e-11!128;UBERON:0007026!1.30e-11!128;UBERON:0004921!2.56e-11!126;UBERON:0004185!2.56e-11!126
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.21e-13,47;UBERON:0000160,2.35e-11,31;UBERON:0004119,4.44e-09,118;UBERON:0000925,4.44e-09,118;UBERON:0006595,4.44e-09,118;UBERON:0001007,2.42e-08,116;UBERON:0001555,2.42e-08,116;UBERON:0007026,2.42e-08,116;UBERON:0004921,2.43e-08,114;UBERON:0005178,1.79e-07,17;UBERON:0005181,1.79e-07,17;UBERON:0002224,1.79e-07,17;UBERON:0000915,1.79e-07,17;UBERON:0008947,1.79e-07,17;UBERON:0003258,1.79e-07,17
|phase1_expression=0.480446541314382,0.697950815278722,1.36499771816861,31.7587421872172,36.5653882860833,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,1.23402990245165,0,1.02051948181284,0,0,0.799962113967033,1.37645568640302,2.29692785646008,3.87685796543167,1.07735616342945,12.9215925230334,9.07308467135751,0.665191531965914,0,0,0,0.577703239502549,1.99481574430191,0.816677425049476,23.8563029520037,17.1893775795236,15.1821885752402,30.5880373776127,36.2014107027976,27.6740901227758,0,0.304130793658544,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0,0,0,0,5.79728977403356,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,2.39433813620357,0,0,0,3.68034769719064,4.81383744402687,5.05524445014783,3.65388415100992,0.517875767294343,0,0,0,0,0,0,0,26.2026665798436,0,4.42305275974937,0,0.220841518460394,0,14.9113408974498,0,0,12.517395705221,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,1.2220723662038,1.8661045591514,1.26361379216837,1.05220927943237,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.374806898238915,2.06962696591213,0.215567992932842,0,0,0,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.930135779001631,0.536546802799238,0.934122738937356,0.658239399653922,1.14917224855367,1.78351381000883,0.730999937126662,0.658650345873152,1.61047702512446,0,0,27.755177770639,14.0158800331678,0,0.928946687441754,2.83508414908605,5.84882221407693,7.56085349072559,6.27744566171445,7.11793592316767,10.3760341476127,9.0480675168097,9.94782360205754,7.21367122340745,9.88701349519644,9.29393614461185,9.95706366271836,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,1.68325967736765,0.822074982615345,1.18088118383682,0.784993639206874,1.35736880313981,0.592905254174298,0,0,0,0,0,1.01850340712568,1.43848068725405,0.486405680325106,0.274561413188081,1.43768206527355,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,5.54259570499814,0,0.977789858652155,1.18821560042632,1.17345124144251,2.68010011906905,5.2369600994923,6.82967767502296,4.88668946729192,2.21464689648775,1.75400245523236,5.73521601505083,3.62638461918381,6.65385669474953,0,0,0.983528546038072,4.41498794087572,0.642202359951168,0.586058432961016,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.851640511249612,0.35613120733451,0.81443479676788,1.48473110675282,1.32745138339963,0.971122544619926,0.302323556964751,1.13163047853539,1.77181135728464,1.53717573971964,5.68542244970086,1.45413491791002,1.42598951353889,1.58018378967908,2.10837217149998,0,3.40439605753788,1.26042765821917,1.29358683782755,1.07168517515796,1.41872186913819,1.60531935841864,1.48094118541909,1.522324745573,2.11204537257339,3.81297727554876,3.52845436887939,6.43056386471772,1.61464426695906,1.02531972377865,0.835606408021955,1.14898629821543,12.2421951384537,0.18542530201051,1.02522528478712,2.06386867963222,1.48155621895769,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,5.72802370809068,0.474503990371703,0.609958401380546,1.62008011232702,2.29997125615916,1.09181281873089,3.37160865962052,2.89287095038676,2.87931536182433,5.70305882483889,8.69875038321696,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0.781226309063701,0.314578033277133,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0.721172697119813,0.295379054349154,0.201932899896295,0.304827226619999,0.504130925684203,0.292373642219257,0.288635524920988,0.350630706544707,2.49403421976732,1.77588762699252,0.179427713218951,0.839423081820392,2.31827512838629,3.00291960721891,2.74727436400898,2.78678892802786,3.51100472824754,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,1.55572709461131,0.824140228955577,0.64183841918363,2.02157769411038,1.2673964994512,1.88626341386076,1.21733959710847,0.832326981263301,0.976402972245426,1.90517476513229,2.20180219295225,1.35036454324594,0.824171801606613,1.32479028120958,1.37147700954166,0.532427418478012,0.238436189947321,1.59881058295561,0.752875043322645,1.26921911837515,1.09756783723664,0.526139422875686,1.22223702461276,0.561142271657738,0.711810108745045,1.28055827088233,1.63692417267876,1.08455788830176,1.35034627686799,0.749431733813838,1.40358965067245,1.50409737833809,0,0,0.231867835620421
|short_description=p1@Il28ra
}}

Latest revision as of 12:41, 26 September 2015

Short description:p1@Il28ra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Il28ra_5end
Coexpression cluster:MCL_coexpression_mm9:1802
Association with transcript: 0bp_to_NM_174851, uc008vgw.2_5end
EntrezGene:Il28ra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Il28ra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.76
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H236.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H427.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A826.20
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I327.76
intestine, adult.CNhs10496.178-9A314.02
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E910.38
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G19.96
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system6.21e-1347
intestine2.35e-1131
endoderm-derived structure4.44e-09118
endoderm4.44e-09118
presumptive endoderm4.44e-09118
digestive system2.42e-08116
digestive tract2.42e-08116
primitive gut2.42e-08116
subdivision of digestive tract2.43e-08114
thoracic cavity element1.79e-0717
thoracic segment organ1.79e-0717
thoracic cavity1.79e-0717
thoracic segment of trunk1.79e-0717
respiratory primordium1.79e-0717
endoderm of foregut1.79e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:135242370..135242411,%2B&oldid=4254014"