FFCP PHASE1:Hg19::chr8:143781432..143781443,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24225 | |||
|TSSclassifier=strong | |||
|UniProt=Q17RY6 | |||
|association_with_transcript=-85bp_to_ENST00000292430,ENST00000561179,NM_001160354,NM_001160355,NM_017527,uc011ljv.1,uc011ljw.1,uc011ljx.1_5end | |||
|cluster_id=chr8:143781432..143781443,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_7_at_LY6K_5end | |||
|id=chr8:143781432..143781443,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.33e-16!45;CL:0002057!4.88e-13!42;CL:0002194!2.68e-09!63;CL:0000576!2.68e-09!63;CL:0000040!2.68e-09!63;CL:0000559!2.68e-09!63;CL:0002009!8.29e-09!65;CL:0000839!1.02e-07!70;CL:0000557!1.62e-07!71;CL:0000066!3.60e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.06e-26;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.92e-13,106;DOID:0050687,2.78e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-16!9;UBERON:0001557!1.19e-14!19;UBERON:0000072!7.83e-10!46;UBERON:0000065!8.69e-08!53;UBERON:0000467!1.18e-07!625;UBERON:0004119!1.18e-07!169;UBERON:0000925!1.18e-07!169;UBERON:0006595!1.18e-07!169;UBERON:0000480!1.35e-07!626;UBERON:0001004!1.44e-07!72;UBERON:0008947!2.02e-07!38;UBERON:0003258!2.02e-07!38;UBERON:0002371!2.87e-07!80;UBERON:0000926!2.99e-07!448;UBERON:0004120!2.99e-07!448;UBERON:0006603!2.99e-07!448;UBERON:0000062!3.24e-07!511;UBERON:0004765!3.52e-07!101;UBERON:0001434!3.52e-07!101;UBERON:0000923!3.64e-07!604;UBERON:0005291!3.64e-07!604;UBERON:0006598!3.64e-07!604;UBERON:0002532!3.64e-07!604;UBERON:0002050!4.16e-07!605;UBERON:0005423!4.16e-07!605;UBERON:0000468!4.83e-07!659;UBERON:0001007!6.05e-07!155;UBERON:0001555!6.05e-07!155;UBERON:0007026!6.05e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-85;9!UBERON:0001557;2.07e-85;9!UBERON:0000072;1.08e-18;37!UBERON:0000065;8.77e-16;44!UBERON:0001004;4.27e-10;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.54e-86,9;UBERON:0001557,1.92e-49,19;UBERON:0008947,1.67e-19,38;UBERON:0003258,1.67e-19,38;UBERON:0000072,3.63e-19,47;UBERON:0000065,1.71e-16,54;UBERON:0001041,9.30e-12,87;UBERON:0001004,1.23e-11,74;UBERON:0004921,3.91e-08,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0.619412741790207,0,1.0246428261164,0.236482229888585,0,0.645484683583826,1.35426486594342,0.188242339542605,1.09162460023138,0.224723484445085,0,0,0,0,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,0,1.84138817993782,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,2.02301628093722,1.44606617930089,2.53676137284506,1.96091499683166,2.84724742933316,3.23595139584395,2.15843611637881,1.53898862778556,0,1.40241773803446,0,0,0,0,0,0,0,0,0.548751427043128,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.806026704325635,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0.278847488557207,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0.627865836814451,0,0,0,0,0.685946781900644,0.609414446062818,0,0,1.9351266257817,0.877071805034227,1.31384731285135,0.193978032976839,0,0,0.411125773940253,0,0,0.782205530939212,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,1.5018336599544,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.354809480650555,0,0,0,0,0.590969204419841,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,1.05868461514708,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.560659312903067,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0.853818767021724,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LY6K | |||
}} |
Latest revision as of 21:14, 16 September 2015
Short description: | p7@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -85bp_to_ENST00000292430, ENST00000561179, NM_001160354, NM_001160355, NM_017527, uc011ljv.1, uc011ljw.1, uc011ljx.1_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | Q17RY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.54e-86 | 9 |
upper respiratory tract | 1.92e-49 | 19 |
respiratory primordium | 1.67e-19 | 38 |
endoderm of foregut | 1.67e-19 | 38 |
segment of respiratory tract | 3.63e-19 | 47 |
respiratory tract | 1.71e-16 | 54 |
foregut | 9.30e-12 | 87 |
respiratory system | 1.23e-11 | 74 |
subdivision of digestive tract | 3.91e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.92e-13 | 106 |
cell type cancer | 2.78e-09 | 143 |