FFCP PHASE1:Hg19::chr8:134072569..134072583,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=strong | |||
|UniProt=Q13239 | |||
|association_with_transcript=19bp_to_ENST00000427060,NM_006748,uc011ljd.1_5end | |||
|cluster_id=chr8:134072569..134072583,- | |||
|coexpression_cluster_id=C4729 | |||
|description=CAGE_peak_7_at_SLA_5end | |||
|id=chr8:134072569..134072583,- | |||
|ontology_enrichment_celltype=CL:0000738!1.38e-51!140;CL:0000037!1.80e-51!172;CL:0000566!1.80e-51!172;CL:0000988!1.72e-50!182;CL:0002032!5.75e-48!165;CL:0000837!5.75e-48!165;CL:0002087!6.12e-40!119;CL:0002031!2.29e-39!124;CL:0000542!2.54e-37!53;CL:0000051!2.54e-37!53;CL:0000838!2.33e-36!52;CL:0000084!1.67e-26!25;CL:0000827!1.67e-26!25;CL:0000791!1.14e-19!18;CL:0000789!1.14e-19!18;CL:0002420!1.14e-19!18;CL:0002419!1.14e-19!18;CL:0000790!1.14e-19!18;CL:0000763!1.08e-15!112;CL:0000049!1.08e-15!112;CL:0000625!3.21e-13!11;CL:0000766!3.37e-13!76;CL:0000236!6.74e-13!14;CL:0000945!9.50e-10!24;CL:0000826!9.50e-10!24;CL:0000557!1.41e-09!71;CL:0000839!5.79e-09!70;CL:0000134!1.62e-08!358;CL:0002320!7.52e-08!365;CL:0002009!1.60e-07!65;CL:0002057!1.64e-07!42;CL:0000624!1.97e-07!6;CL:0002194!3.40e-07!63;CL:0000576!3.40e-07!63;CL:0000040!3.40e-07!63;CL:0000559!3.40e-07!63;CL:0000080!4.70e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.31e-38;25!CL:0000542;3.46e-29;53!CL:0000791;2.37e-27;18!CL:0000789;2.37e-27;18!CL:0002419;2.37e-27;18!CL:0000625;4.79e-20;11!CL:0000236;5.75e-17;13!CL:0000624;7.43e-11;6!CL:0002087;2.58e-10;104!CL:0000945;2.28e-09;24!CL:0000738;3.82e-09;136!CL:0000988;4.15e-09;177!CL:0000094;3.17e-07;8!CL:0000081;9.91e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.38e-48,53;CL:0000051,6.38e-48,53;CL:0000838,1.88e-46,52;CL:0000738,1.22e-43,136;CL:0000988,2.04e-42,177;CL:0000037,1.68e-41,168;CL:0000084,3.76e-38,25;CL:0000827,3.76e-38,25;CL:0002032,5.74e-38,161;CL:0000837,5.74e-38,161;CL:0002087,2.67e-34,115;CL:0002031,6.99e-32,120;CL:0000791,2.60e-27,18;CL:0000789,2.60e-27,18;CL:0002420,2.60e-27,18;CL:0002419,2.60e-27,18;CL:0000790,2.60e-27,18;CL:0000625,5.28e-20,11;CL:0000236,1.94e-15,14;CL:0000624,7.45e-11,6;CL:0000134,2.38e-09,354;CL:0000945,2.72e-09,24;CL:0000826,2.72e-09,24;CL:0002320,7.92e-09,361;CL:0000094,1.99e-07,8;CL:0000219,4.95e-07,386;CL:0000081,6.57e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.46e-29;53!CL:0000790;2.37e-27;18 | |||
|ontology_enrichment_disease=DOID:2531!4.22e-08!51;DOID:0060083!4.22e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-21!102;UBERON:0003061!1.73e-21!102;UBERON:0002193!7.20e-20!112;UBERON:0000178!6.45e-16!15;UBERON:0000179!6.45e-16!15;UBERON:0000463!6.45e-16!15;UBERON:0002371!1.51e-08!80;UBERON:0007023!1.71e-08!115;UBERON:0002405!1.51e-07!115;UBERON:0002384!2.76e-07!375;UBERON:0001474!2.89e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.03e-24;15!UBERON:0000179;4.03e-24;15!UBERON:0000463;4.03e-24;15!UBERON:0002390;8.34e-15;32!UBERON:0002193;4.91e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.80e-24,15;UBERON:0000179,2.80e-24,15;UBERON:0000463,2.80e-24,15;UBERON:0002390,1.71e-13,98;UBERON:0003061,1.71e-13,98;UBERON:0002193,3.29e-13,108;UBERON:0002384,4.00e-08,371;UBERON:0004177,5.83e-07,7;UBERON:0005057,5.83e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,4.60595277716655,1.85779347979291,0,0,0,0.0774672005803016,0,0.587200878669695,1.10799081706375,1.40381113229099,0.868043482863407,0.223915474239924,0.971680998056939,1.03030227053675,0.290796477559129,0.377875943688809,0,0,0,0.929119112685311,0.575384784644301,0.768482119587302,2.12834006899727,1.72372840368309,1.29096936716765,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0,0,1.19678194572979,1.27867425159808,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,1.84138817993782,1.26584954976354,0,0,0,0.112328631146495,0,0,0,0,0,7.03984977845291,14.1996038928154,11.5636203002262,14.5088275672612,11.2110876370083,10.9202963591352,13.2208974556972,15.2648600725658,3.41527781465669,1.17447437874188,3.44045905312706,0,2.80254281490768,1.31692042387539,3.73748563216283,9.03924754323079,4.5232329779892,0.501559486172034,5.54067853277104,1.89379122293893,1.94826728407911,8.13296335261767,1.17842362989935,3.54454231333794,1.62482318259009,2.68991771423918,3.77172107923647,4.27538551969558,5.25065033793112,6.37566788617116,5.04174314751005,5.61835738988397,2.09071047609954,5.89208582027344,5.74830740402882,5.15441168223945,5.31341353240956,5.41561204350964,7.81300144627702,4.75226022224187,6.77588035849977,5.37543766848557,6.24653632761729,6.62976305723247,4.92676798152628,6.24980903996671,12.5696892018248,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,2.27183175558278,2.26368658489047,3.0580330919339,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9292490642937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,1.97065295158377,0.968532774145487,0.829312462163088,2.45003920808834,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,6.69904584686553,8.40947541952118,3.9786341246722,0,0,0,0,0,0,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,5.39285502046542,5.54983300577911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,6.88173486428138,3.41788312304498,6.19402616190251,6.9931586424653,2.59389324477087,5.94034580961926,4.75875105776562,0,0,0,3.71606350251437,0,9.53300700868749,11.1598390910176,6.78569862871576,0.191505370132367,4.02179807175377,0,0,0.228234679033192,0,0,0.846458889008016,1.76646882614069,0.605399121573143,0,0,0,0,0,0,0,0,2.16364542780786,0,0,0,0.439524537815682,0,1.11443384277478,0,0,0,0,0,0,0,1.48323486804084,0,0.19924798825107,2.21027132424918,0,0,0,0,0,0,0,0.394573622547734,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,17.3728606932752,16.1689664086876,6.64846727600626,0,0,0,0,3.49660473756833,0,0,0,0,0,0,0,2.6686901581256,3.70691816839509,1.56632924258183,0,0,0.234264445725339,0.364909578431332,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78352179414492,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,6.74921674654501,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0,0.293104467356165,0,0.258565912723101,0.26446520348538,0,0,0.640724475406168,0.157204305099666,0.414239055347196,2.97699613087171,1.38328142328561,3.41019275466509,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,1.0629187225069,0.490696182767533,0,0,0,1.39991177098451,0.320075189082423,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0,0,3.00748537535531,3.60964172652032,0,0,0,0,0,1.83491713361816,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0,17.3098278360496,15.4566038596686,0,0,0,0.217716747896961,0.342233301085281,5.25346013513783,0.502055437748735,0,0,0,0,0,0,0.122241444182866,0,0,5.43439242695771,0 | |||
|short_description=p7@SLA | |||
}} |
Latest revision as of 15:04, 16 September 2015
Short description: | p7@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLA_5end |
Coexpression cluster: | C4729_Hodgkin_thymus_chronic_hairy_acute_CD8_immature |
Association with transcript: | 19bp_to_ENST00000427060, NM_006748, uc011ljd.1_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | Q13239 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.38e-48 | 53 |
common lymphoid progenitor | 6.38e-48 | 53 |
lymphoid lineage restricted progenitor cell | 1.88e-46 | 52 |
leukocyte | 1.22e-43 | 136 |
hematopoietic cell | 2.04e-42 | 177 |
hematopoietic stem cell | 1.68e-41 | 168 |
T cell | 3.76e-38 | 25 |
pro-T cell | 3.76e-38 | 25 |
hematopoietic oligopotent progenitor cell | 5.74e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.74e-38 | 161 |
nongranular leukocyte | 2.67e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 6.99e-32 | 120 |
mature alpha-beta T cell | 2.60e-27 | 18 |
alpha-beta T cell | 2.60e-27 | 18 |
immature T cell | 2.60e-27 | 18 |
mature T cell | 2.60e-27 | 18 |
immature alpha-beta T cell | 2.60e-27 | 18 |
CD8-positive, alpha-beta T cell | 5.28e-20 | 11 |
B cell | 1.94e-15 | 14 |
CD4-positive, alpha-beta T cell | 7.45e-11 | 6 |
mesenchymal cell | 2.38e-09 | 354 |
lymphocyte of B lineage | 2.72e-09 | 24 |
pro-B cell | 2.72e-09 | 24 |
connective tissue cell | 7.92e-09 | 361 |
granulocyte | 1.99e-07 | 8 |
motile cell | 4.95e-07 | 386 |
blood cell | 6.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 2.80e-24 | 15 |
haemolymphatic fluid | 2.80e-24 | 15 |
organism substance | 2.80e-24 | 15 |
hematopoietic system | 1.71e-13 | 98 |
blood island | 1.71e-13 | 98 |
hemolymphoid system | 3.29e-13 | 108 |
connective tissue | 4.00e-08 | 371 |
hemopoietic organ | 5.83e-07 | 7 |
immune organ | 5.83e-07 | 7 |