FFCP PHASE1:Mm9::chr10:59755248..59755262,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:59755248..59755262,+
|short_description=p@chr10:59755248..59755262,+
|description=CAGE_peak_at_chr10:59755248..59755262,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:59755248..59755262,+ | |||
|description=CAGE_peak_at_chr10:59755248..59755262,+ | |||
|id=chr10:59755248..59755262,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.05e-15,4;CL:0000766,4.05e-15,4;CL:0000234,4.05e-15,4;CL:0000576,4.05e-15,4;CL:0000235,4.05e-15,4;CL:0000864,4.05e-15,4;CL:0002009,4.05e-15,4;CL:0000040,4.05e-15,4;CL:0000559,4.05e-15,4;CL:0002092,1.49e-12,3;CL:0002540,1.49e-12,3;CL:0000355,1.21e-09,9;CL:0000680,1.46e-09,6;CL:0000187,1.46e-09,6;CL:0000056,1.46e-09,6;CL:0002476,9.86e-09,2;CL:0000473,1.11e-08,7;CL:0000557,1.11e-08,7;CL:0000222,3.28e-08,7;CL:0000878,4.84e-08,2;CL:0000129,4.84e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.87e-14,32;UBERON:0002371,6.77e-11,16;UBERON:0001134,1.21e-09,9;UBERON:0002036,1.21e-09,9;UBERON:0002385,1.21e-09,9;UBERON:0000486,1.21e-09,9;UBERON:0007503,1.21e-09,9;UBERON:0001015,1.21e-09,9;UBERON:0002329,1.21e-09,9;UBERON:0003082,1.21e-09,9;UBERON:0003059,1.21e-09,9;UBERON:0007282,1.21e-09,9;UBERON:0004290,1.21e-09,9;UBERON:0009618,1.21e-09,9;UBERON:0000383,1.18e-08,10;UBERON:0007524,7.56e-08,11;UBERON:0003077,7.56e-08,11;UBERON:0007285,7.56e-08,11;UBERON:0001474,1.13e-07,22;UBERON:0004765,1.13e-07,22;UBERON:0001434,1.13e-07,22 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0.548457734422955,0,0.17008658030214,0,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,1.67412652294763,0,0,0.588231488031014,0,0.485510353031154,1.1330713617802,1.52065396829272,0.550640256485045,2.34717403304412,0.872100625521786,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,1.54701627683233,0,0.528990979272033,0,0.338844532069132,0,5.84934816232909,17.7995945262055,7.8152812644071,2.39680088414724,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0,0.191690942036473,0,2.20231761998777,0.255374676170375,0.307213066512487,0,0.274462930807229,0,1.67509799400829,0.56276261003168,0.61119299110724,0,0.427115042397309,0.372798891650601,0.454357159999104,0.755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.779358013808606,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0,0,0,0.125666591329675,0.247194967734374,0.722996784599558,0.884610551949874,0,0.441683036920787,0,0,0,10.6817820474862,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.511430914660661,1.24672826735736,0.162241263067758,0.305518091550949,0.497627882440372,0.252722758433675,1.47309299120532,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0.492502392237286,0.243206428637567,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0.991256348951394,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0.898819408654221,1.08069024937347,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.287696137450811,1.45921704097532,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,6.03165135757089,2.71952841909355,0,0.827810238914197,0.642202359951168,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,3.75474732901937,0.847328283455281,0.220528398054962,0.16488625294148,0,0.120625849856312,0,0,1.1659233465194,0.370850604021019,0.854354403989263,0.412773735926445,0,0.565105371014073,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0.26175594198403,0.518459893167171,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.604957110821043,0.194915761479505,0.384847366561318,0.233753804363138,0.453460767230423,0,0.179427713218951,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.231867835620421 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0.548457734422955,0,0.17008658030214,0,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,1.67412652294763,0,0,0.588231488031014,0,0.485510353031154,1.1330713617802,1.52065396829272,0.550640256485045,2.34717403304412,0.872100625521786,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,1.54701627683233,0,0.528990979272033,0,0.338844532069132,0,5.84934816232909,17.7995945262055,7.8152812644071,2.39680088414724,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0,0.191690942036473,0,2.20231761998777,0.255374676170375,0.307213066512487,0,0.274462930807229,0,1.67509799400829,0.56276261003168,0.61119299110724,0,0.427115042397309,0.372798891650601,0.454357159999104,0.755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.779358013808606,0,0,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0,0,0,0.125666591329675,0.247194967734374,0.722996784599558,0.884610551949874,0,0.441683036920787,0,0,0,10.6817820474862,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.511430914660661,1.24672826735736,0.162241263067758,0.305518091550949,0.497627882440372,0.252722758433675,1.47309299120532,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0.492502392237286,0.243206428637567,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0.991256348951394,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0.898819408654221,1.08069024937347,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.287696137450811,1.45921704097532,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,6.03165135757089,2.71952841909355,0,0.827810238914197,0.642202359951168,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,3.75474732901937,0.847328283455281,0.220528398054962,0.16488625294148,0,0.120625849856312,0,0,1.1659233465194,0.370850604021019,0.854354403989263,0.412773735926445,0,0.565105371014073,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0.26175594198403,0.518459893167171,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.604957110821043,0.194915761479505,0.384847366561318,0.233753804363138,0.453460767230423,0,0.179427713218951,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0.231867835620421 | ||
|short_description=p@chr10:59755248..59755262,+ | |||
}} | }} |
Latest revision as of 12:45, 4 August 2015
Short description: | p@chr10:59755248..59755262, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59755248..59755262, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.05e-15 | 4 |
myeloid leukocyte | 4.05e-15 | 4 |
phagocyte | 4.05e-15 | 4 |
monocyte | 4.05e-15 | 4 |
macrophage | 4.05e-15 | 4 |
tissue-resident macrophage | 4.05e-15 | 4 |
macrophage dendritic cell progenitor | 4.05e-15 | 4 |
monoblast | 4.05e-15 | 4 |
promonocyte | 4.05e-15 | 4 |
bone marrow cell | 1.49e-12 | 3 |
mesenchymal stem cell of the bone marrow | 1.49e-12 | 3 |
multi-potent skeletal muscle stem cell | 1.21e-09 | 9 |
muscle precursor cell | 1.46e-09 | 6 |
muscle cell | 1.46e-09 | 6 |
myoblast | 1.46e-09 | 6 |
bone marrow macrophage | 9.86e-09 | 2 |
defensive cell | 1.11e-08 | 7 |
granulocyte monocyte progenitor cell | 1.11e-08 | 7 |
mesodermal cell | 3.28e-08 | 7 |
central nervous system macrophage | 4.84e-08 | 2 |
microglial cell | 4.84e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.87e-14 | 32 |
bone marrow | 6.77e-11 | 16 |
skeletal muscle tissue | 1.21e-09 | 9 |
striated muscle tissue | 1.21e-09 | 9 |
muscle tissue | 1.21e-09 | 9 |
multilaminar epithelium | 1.21e-09 | 9 |
epithelial vesicle | 1.21e-09 | 9 |
musculature | 1.21e-09 | 9 |
somite | 1.21e-09 | 9 |
myotome | 1.21e-09 | 9 |
presomitic mesoderm | 1.21e-09 | 9 |
presumptive segmental plate | 1.21e-09 | 9 |
dermomyotome | 1.21e-09 | 9 |
trunk paraxial mesoderm | 1.21e-09 | 9 |
musculature of body | 1.18e-08 | 10 |
dense mesenchyme tissue | 7.56e-08 | 11 |
paraxial mesoderm | 7.56e-08 | 11 |
presumptive paraxial mesoderm | 7.56e-08 | 11 |
bone element | 1.13e-07 | 22 |
skeletal element | 1.13e-07 | 22 |
skeletal system | 1.13e-07 | 22 |