FFCP PHASE1:Hg19::chr8:101661856..101661868,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=169166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28605 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N9S9 | |||
|association_with_transcript=24bp_to_ENST00000311812,NM_152628,uc003yjr.2_5end | |||
|cluster_id=chr8:101661856..101661868,- | |||
|description=CAGE_peak_1_at_SNX31_5end | |||
|id=chr8:101661856..101661868,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.91e-19;1!UBERON:0006595;1.41e-07;86!UBERON:0009847;1.99e-07;3!UBERON:0003353;1.99e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-22!115;UBERON:0000161!4.12e-15!35;UBERON:0003127!3.68e-11!2;UBERON:0000341!4.27e-11!2;UBERON:0000166!9.63e-11!21;UBERON:0000165!5.04e-10!28;UBERON:0000930!5.04e-10!28;UBERON:0003729!3.96e-09!5;UBERON:0000974!4.28e-08!10;UBERON:0001723!1.07e-07!3;UBERON:0001033!1.07e-07!3;UBERON:0010056!1.07e-07!3;UBERON:0001007!4.87e-07!155;UBERON:0001555!4.87e-07!155;UBERON:0007026!4.87e-07!155;UBERON:0000078!9.03e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.95e-20;1!UBERON:0001961;8.95e-20;1!UBERON:0001744;8.95e-20;1!UBERON:0001042;8.95e-20;1!UBERON:0001735;8.95e-20;1!UBERON:0000996;1.18e-19;1!UBERON:0000974;5.76e-13;6!UBERON:0006562;1.43e-10;2!UBERON:0001255;1.89e-10;2!UBERON:0001556;1.89e-10;2!UBERON:0000341;2.07e-10;2!UBERON:0003127;2.99e-10;2!UBERON:0001043;2.97e-07;3!UBERON:0001723;2.97e-07;3!UBERON:0001033;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,8.95e-20,1;UBERON:0001961,8.95e-20,1;UBERON:0001744,8.95e-20,1;UBERON:0001735,8.95e-20,1;UBERON:0000996,1.08e-19,1;UBERON:0000161,5.16e-18,36;UBERON:0000162,2.09e-12,14;UBERON:0001353,2.09e-12,14;UBERON:0000163,2.09e-12,14;UBERON:0006866,2.09e-12,14;UBERON:0000164,2.09e-12,14;UBERON:0000931,2.09e-12,14;UBERON:0004122,1.27e-11,15;UBERON:0001255,1.89e-10,2;UBERON:0001556,1.89e-10,2;UBERON:0000341,2.07e-10,2;UBERON:0003127,2.99e-10,2;UBERON:0007023,1.02e-09,114;UBERON:0001046,2.66e-09,19;UBERON:0001042,3.03e-08,10;UBERON:0009145,3.03e-08,10;UBERON:0000974,4.04e-08,10;UBERON:0000166,5.26e-08,22;UBERON:0006562,1.42e-07,11;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3;UBERON:0001043,2.79e-07,3;UBERON:0009143,2.79e-07,3;UBERON:0004921,3.96e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,4.34030984802508,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64881328030313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.367182116944987,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06172751012966,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,6.12246124234009,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,3.19850972851471,0.476128862927481,0,0,0,0,0,0.653150243690884,1.71116650542641,7.61078199064839,1.5061663132462,0.99798106963804,0,0,0,0,0,0,0,6.65756774185513,0,0 | |||
|short_description=p1@SNX31 | |||
}} |
Latest revision as of 19:54, 24 September 2015
Short description: | p1@SNX31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX31_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000311812, NM_152628, uc003yjr.2_5end |
EntrezGene: | SNX31 |
HGNC: | 28605 |
UniProt: | Q8N9S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 8.95e-20 | 1 |
mucosa-associated lymphoid tissue | 8.95e-20 | 1 |
lymphoid tissue | 8.95e-20 | 1 |
tonsillar ring | 8.95e-20 | 1 |
vagina | 1.08e-19 | 1 |
orifice | 5.16e-18 | 36 |
cloaca | 2.09e-12 | 14 |
anal region | 2.09e-12 | 14 |
embryonic cloaca | 2.09e-12 | 14 |
terminal part of digestive tract | 2.09e-12 | 14 |
primitive urogenital sinus | 2.09e-12 | 14 |
proctodeum | 2.09e-12 | 14 |
genitourinary system | 1.27e-11 | 15 |
urinary bladder | 1.89e-10 | 2 |
lower urinary tract | 1.89e-10 | 2 |
throat | 2.07e-10 | 2 |
open tracheal system trachea | 2.99e-10 | 2 |
adult organism | 1.02e-09 | 114 |
hindgut | 2.66e-09 | 19 |
chordate pharynx | 3.03e-08 | 10 |
pharyngeal region of foregut | 3.03e-08 | 10 |
neck | 4.04e-08 | 10 |
oral opening | 5.26e-08 | 22 |
pharynx | 1.42e-07 | 11 |
digestive system | 1.95e-07 | 145 |
digestive tract | 1.95e-07 | 145 |
primitive gut | 1.95e-07 | 145 |
tongue | 2.63e-07 | 3 |
gustatory system | 2.63e-07 | 3 |
future tongue | 2.63e-07 | 3 |
esophagus | 2.79e-07 | 3 |
esophageal region | 2.79e-07 | 3 |
subdivision of digestive tract | 3.96e-07 | 118 |