FFCP PHASE1:Mm9::chr3:87180318..87180332,+: Difference between revisions
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{{FFCP|EntrezGene=229499|HGNC=|MCL_coexpression_id=18|UniProt=Q8R4Y0,E9Q958,E9Q5S9|association_with_transcript=9bp_to_ENSMUST00000072480,ENSMUST00000163661,ENSMUST00000167200,NM_001136236,NM_153090,NM_178165,uc008psb.2,uc008psc.2,uc008psd.2_5end|description=CAGE_peak_3_at_Fcrl1_5end|id=chr3:87180318..87180332,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.06e-13,25;CL:0000553,3.46e-11,6;CL:0000556,3.46e-11,6;CL:0000839,5.93e-11,13;CL:0000988,4.63e-10,32;CL:0002032,4.63e-10,32;CL:0000037,4.63e-10,32;CL:0000837,4.63e-10,32;CL:0000763,1.24e-08,16;CL:0000738,2.37e-07,17;CL:0002087,2.37e-07,17;CL:0000050,2.72e-07,9;CL:0000049,4.76e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.94e-13!70;UBERON:0002193!7.30e-12!48;UBERON:0002390!6.95e-10!45;UBERON:0003061!6.95e-10!45;UBERON:0005057!3.28e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0001474,2.71e-09,22;UBERON:0004765,2.71e-09,22;UBERON:0001434,2.71e-09,22;UBERON:0002371,1.24e-08,16;UBERON:0002204,1.84e-08,32;UBERON:0002465,2.20e-08,3;UBERON:0002106,4.86e-07,6;UBERON:0004457,4.86e-07,6;UBERON:0000042,4.86e-07,6;UBERON:0004854,4.86e-07,6;UBERON:0009034,4.86e-07,6;UBERON:0002095,4.86e-07,6;UBERON:0004782,4.86e-07,6;UBERON:0003281,4.86e-07,6;UBERON:0009664,4.86e-07,6;UBERON:0002296,4.86e-07,6;UBERON:0005602,4.86e-07,6;UBERON:0001179,4.86e-07,6;UBERON:0006293,4.86e-07,6|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.422366166455,0,1.88339765048055,0.239316476986009,0.513602189793617,0,5.3297561890506,8.30148596298286,0,42.9028544887203,38.1178125423954,36.4975100546306,0.17008658030214,1.19149141441062,0.522399578277871,3.51983330145495,3.21172993494038,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,1.67412652294763,3.1253413780952,0.523523743973798,7.64700934440319,3.41522742479223,2.42755176515577,0,0,0,0,0,0,0,0,0,34.2276516357782,3.62681071005672,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.91347103775248,54.3769555659061,0.445326417194474,0,0,0,0,0,0,0.494389935468748,0.289198713839823,3.5384422077995,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,1.02182822083437,0.718890747035522,0,0.381210681219194,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0,2.25415471346161,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0.667380422864376,0.393117990226406,0.899448449539415,0.811440485554012,0.241177159752417,0,1.15078454980324,1.13494658742525,1.09824565275233,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,0.664394068946325,0.637819074629948,0.81931657357869,0.690739927463582,0.289298117163023,1.50791283939272,1.08781136763742,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,1.7488850197791,0,7.34744787430767,0.412773735926445,0.740778109478847,3.20226376907975,6.69801715833023,8.00723606222829,0.849892149969277,1.39951452323658,0.967399816630967,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.384847366561318,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,0,0,0,0.695603506861264|short_description=p3@Fcrl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229499 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R4Y0,E9Q958,E9Q5S9 | |||
|association_with_transcript=9bp_to_ENSMUST00000072480,ENSMUST00000163661,ENSMUST00000167200,NM_001136236,NM_153090,NM_178165,uc008psb.2,uc008psc.2,uc008psd.2_5end | |||
|cluster_id=chr3:87180318..87180332,+ | |||
|description=CAGE_peak_3_at_Fcrl1_5end | |||
|id=chr3:87180318..87180332,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.06e-13,25;CL:0000553,3.46e-11,6;CL:0000556,3.46e-11,6;CL:0000839,5.93e-11,13;CL:0000988,4.63e-10,32;CL:0002032,4.63e-10,32;CL:0000037,4.63e-10,32;CL:0000837,4.63e-10,32;CL:0000763,1.24e-08,16;CL:0000738,2.37e-07,17;CL:0002087,2.37e-07,17;CL:0000050,2.72e-07,9;CL:0000049,4.76e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.94e-13!70;UBERON:0002193!7.30e-12!48;UBERON:0002390!6.95e-10!45;UBERON:0003061!6.95e-10!45;UBERON:0005057!3.28e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0001474,2.71e-09,22;UBERON:0004765,2.71e-09,22;UBERON:0001434,2.71e-09,22;UBERON:0002371,1.24e-08,16;UBERON:0002204,1.84e-08,32;UBERON:0002465,2.20e-08,3;UBERON:0002106,4.86e-07,6;UBERON:0004457,4.86e-07,6;UBERON:0000042,4.86e-07,6;UBERON:0004854,4.86e-07,6;UBERON:0009034,4.86e-07,6;UBERON:0002095,4.86e-07,6;UBERON:0004782,4.86e-07,6;UBERON:0003281,4.86e-07,6;UBERON:0009664,4.86e-07,6;UBERON:0002296,4.86e-07,6;UBERON:0005602,4.86e-07,6;UBERON:0001179,4.86e-07,6;UBERON:0006293,4.86e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.422366166455,0,1.88339765048055,0.239316476986009,0.513602189793617,0,5.3297561890506,8.30148596298286,0,42.9028544887203,38.1178125423954,36.4975100546306,0.17008658030214,1.19149141441062,0.522399578277871,3.51983330145495,3.21172993494038,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,1.67412652294763,3.1253413780952,0.523523743973798,7.64700934440319,3.41522742479223,2.42755176515577,0,0,0,0,0,0,0,0,0,34.2276516357782,3.62681071005672,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.91347103775248,54.3769555659061,0.445326417194474,0,0,0,0,0,0,0.494389935468748,0.289198713839823,3.5384422077995,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,1.02182822083437,0.718890747035522,0,0.381210681219194,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0,2.25415471346161,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.592905254174298,0.667380422864376,0.393117990226406,0.899448449539415,0.811440485554012,0.241177159752417,0,1.15078454980324,1.13494658742525,1.09824565275233,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0,0,0,0.315270288212382,0.664394068946325,0.637819074629948,0.81931657357869,0.690739927463582,0.289298117163023,1.50791283939272,1.08781136763742,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,1.7488850197791,0,7.34744787430767,0.412773735926445,0.740778109478847,3.20226376907975,6.69801715833023,8.00723606222829,0.849892149969277,1.39951452323658,0.967399816630967,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0,0.443068581523732,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.384847366561318,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,0,0,0,0.695603506861264 | |||
|short_description=p3@Fcrl1 | |||
}} |
Latest revision as of 19:00, 25 September 2015
Short description: | p3@Fcrl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fcrl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 9bp_to_ENSMUST00000072480, ENSMUST00000163661, ENSMUST00000167200, NM_001136236, NM_153090, NM_178165, uc008psb.2, uc008psc.2, uc008psd.2_5end |
EntrezGene: | Fcrl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.06e-13 | 25 |
megakaryocyte progenitor cell | 3.46e-11 | 6 |
megakaryocyte | 3.46e-11 | 6 |
myeloid lineage restricted progenitor cell | 5.93e-11 | 13 |
hematopoietic cell | 4.63e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.63e-10 | 32 |
hematopoietic stem cell | 4.63e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.63e-10 | 32 |
myeloid cell | 1.24e-08 | 16 |
leukocyte | 2.37e-07 | 17 |
nongranular leukocyte | 2.37e-07 | 17 |
megakaryocyte-erythroid progenitor cell | 2.72e-07 | 9 |
common myeloid progenitor | 4.76e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
bone element | 2.71e-09 | 22 |
skeletal element | 2.71e-09 | 22 |
skeletal system | 2.71e-09 | 22 |
bone marrow | 1.24e-08 | 16 |
musculoskeletal system | 1.84e-08 | 32 |
lymphoid system | 2.20e-08 | 3 |
spleen | 4.86e-07 | 6 |
cavity lining | 4.86e-07 | 6 |
serous membrane | 4.86e-07 | 6 |
gastrointestinal system mesentery | 4.86e-07 | 6 |
stomach region | 4.86e-07 | 6 |
mesentery | 4.86e-07 | 6 |
gastrointestinal system serosa | 4.86e-07 | 6 |
mesentery of stomach | 4.86e-07 | 6 |
gut mesentery | 4.86e-07 | 6 |
dorsal mesentery | 4.86e-07 | 6 |
dorsal mesogastrium | 4.86e-07 | 6 |
peritoneal cavity | 4.86e-07 | 6 |
spleen primordium | 4.86e-07 | 6 |