FFCP PHASE1:Mm9::chr3:84108684..84108704,-: Difference between revisions
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{{FFCP|EntrezGene=80890|HGNC=|MCL_coexpression_id=100|UniProt=|association_with_transcript=-21bp_to_ENSMUST00000136805,uc008ppz.2_5end|description=CAGE_peak_15_at_Trim2_5end|id=chr3:84108684..84108704,-|ontology_enrichment_celltype=CL:0000117!5.15e-17!23;CL:0000337!5.15e-17!23;CL:0000540!2.29e-14!33;CL:0000047!2.29e-14!33;CL:0000031!2.29e-14!33;CL:0000404!2.29e-14!33;CL:0000221!2.73e-11!44;CL:0000133!2.73e-11!44;CL:0002319!4.69e-11!43;CL:0000393!1.32e-10!39;CL:0000211!1.32e-10!39;CL:0000055!4.23e-08!50;CL:0002609!2.35e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,2.45e-29,6;CL:0000117,4.69e-28,23;CL:0000337,4.69e-28,23;CL:0000540,5.19e-19,33;CL:0000047,5.19e-19,33;CL:0000031,5.19e-19,33;CL:0000404,5.19e-19,33;CL:0000393,8.36e-16,39;CL:0000211,8.36e-16,39;CL:0002608,2.39e-15,3;CL:0002613,1.22e-14,3;CL:0002319,3.67e-14,43;CL:0000221,8.50e-14,44;CL:0000133,8.50e-14,44;CL:0002321,5.77e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.34e-18!73;UBERON:0005743!2.34e-18!73;UBERON:0000073!4.66e-18!75;UBERON:0001016!4.66e-18!75;UBERON:0000033!5.39e-17!63;UBERON:0001049!6.93e-17!52;UBERON:0005068!6.93e-17!52;UBERON:0006241!6.93e-17!52;UBERON:0007135!6.93e-17!52;UBERON:0004121!6.23e-16!102;UBERON:0000924!6.23e-16!102;UBERON:0006601!6.23e-16!102;UBERON:0002346!9.85e-16!71;UBERON:0003075!9.85e-16!71;UBERON:0007284!9.85e-16!71;UBERON:0000955!2.18e-15!50;UBERON:0006238!2.18e-15!50;UBERON:0002616!9.09e-15!49;UBERON:0003056!6.22e-14!49;UBERON:0002020!1.93e-12!34;UBERON:0003080!6.71e-12!40;UBERON:0002780!2.90e-11!39;UBERON:0001890!2.90e-11!39;UBERON:0006240!2.90e-11!39;UBERON:0002791!2.47e-09!29;UBERON:0003528!2.47e-09!29;UBERON:0001893!2.47e-09!29;UBERON:0007811!2.55e-09!86;UBERON:0000153!2.80e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-18,29;UBERON:0002791,1.07e-18,29;UBERON:0001893,1.07e-18,29;UBERON:0002020,1.08e-18,34;UBERON:0002780,5.13e-16,39;UBERON:0001890,5.13e-16,39;UBERON:0006240,5.13e-16,39;UBERON:0000369,1.40e-15,5;UBERON:0002435,1.40e-15,5;UBERON:0000204,1.40e-15,5;UBERON:0010082,1.40e-15,5;UBERON:0003080,1.43e-15,40;UBERON:0000073,3.20e-15,54;UBERON:0001049,1.25e-13,52;UBERON:0005068,1.25e-13,52;UBERON:0006241,1.25e-13,52;UBERON:0007135,1.25e-13,52;UBERON:0002616,2.71e-13,46;UBERON:0000955,5.70e-13,47;UBERON:0006238,5.70e-13,47;UBERON:0001017,1.95e-12,73;UBERON:0003056,2.30e-12,49;UBERON:0001016,4.84e-12,75;UBERON:0001954,2.28e-11,7;UBERON:0003022,2.28e-11,7;UBERON:0002421,2.28e-11,7;UBERON:0000349,2.28e-11,7;UBERON:0002600,2.28e-11,7;UBERON:0000956,8.75e-11,21;UBERON:0001869,8.75e-11,21;UBERON:0000203,8.75e-11,21;UBERON:0002346,1.10e-10,64;UBERON:0003075,1.10e-10,64;UBERON:0007284,1.10e-10,64;UBERON:0002420,8.34e-10,8;UBERON:0007245,8.34e-10,8;UBERON:0010009,8.34e-10,8;UBERON:0010011,8.34e-10,8;UBERON:0000454,8.34e-10,8;UBERON:0010371,4.14e-09,73;UBERON:0004121,5.32e-09,95;UBERON:0000924,5.32e-09,95;UBERON:0006601,5.32e-09,95;UBERON:0010314,8.68e-07,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,4.04389488003063,5.26523159493594,5.04779907243317,0.285650984403804,0.662605622854841,5.02212276781312,4.31304619582064,2.75765635983006,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,1.28082701043374,3.64639359389732,0.558365998002762,0,0.763991238884051,1.47314292736834,0.854230084794618,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,0.915001205637253,5.78010019719176,0.695297280769106,0.255715457330331,0.62336413367868,0.486723789203273,0,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0.753524089178575,0.884474488967262,0.640568601424249,0.843315521037559,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.85228302282712,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.836353184057875,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.518936737920883,1.59609949360412,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0,0.412070114477788,0,1.01078884705519,1.01391719956096,0.754505365544305,0.187283014939765,0.640251524048693,0.918967503289812,0.476293691283074,0.927074607558844,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.689531376628944,0,0.619747364743864,0.771626443924566,1.49886346762768,0.701794825336225,0.429742108096597,0,0,0|short_description=p15@Trim2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80890 | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENSMUST00000136805,uc008ppz.2_5end | |||
|cluster_id=chr3:84108684..84108704,- | |||
|description=CAGE_peak_15_at_Trim2_5end | |||
|id=chr3:84108684..84108704,- | |||
|ontology_enrichment_celltype=CL:0000117!5.15e-17!23;CL:0000337!5.15e-17!23;CL:0000540!2.29e-14!33;CL:0000047!2.29e-14!33;CL:0000031!2.29e-14!33;CL:0000404!2.29e-14!33;CL:0000221!2.73e-11!44;CL:0000133!2.73e-11!44;CL:0002319!4.69e-11!43;CL:0000393!1.32e-10!39;CL:0000211!1.32e-10!39;CL:0000055!4.23e-08!50;CL:0002609!2.35e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.45e-29,6;CL:0000117,4.69e-28,23;CL:0000337,4.69e-28,23;CL:0000540,5.19e-19,33;CL:0000047,5.19e-19,33;CL:0000031,5.19e-19,33;CL:0000404,5.19e-19,33;CL:0000393,8.36e-16,39;CL:0000211,8.36e-16,39;CL:0002608,2.39e-15,3;CL:0002613,1.22e-14,3;CL:0002319,3.67e-14,43;CL:0000221,8.50e-14,44;CL:0000133,8.50e-14,44;CL:0002321,5.77e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.34e-18!73;UBERON:0005743!2.34e-18!73;UBERON:0000073!4.66e-18!75;UBERON:0001016!4.66e-18!75;UBERON:0000033!5.39e-17!63;UBERON:0001049!6.93e-17!52;UBERON:0005068!6.93e-17!52;UBERON:0006241!6.93e-17!52;UBERON:0007135!6.93e-17!52;UBERON:0004121!6.23e-16!102;UBERON:0000924!6.23e-16!102;UBERON:0006601!6.23e-16!102;UBERON:0002346!9.85e-16!71;UBERON:0003075!9.85e-16!71;UBERON:0007284!9.85e-16!71;UBERON:0000955!2.18e-15!50;UBERON:0006238!2.18e-15!50;UBERON:0002616!9.09e-15!49;UBERON:0003056!6.22e-14!49;UBERON:0002020!1.93e-12!34;UBERON:0003080!6.71e-12!40;UBERON:0002780!2.90e-11!39;UBERON:0001890!2.90e-11!39;UBERON:0006240!2.90e-11!39;UBERON:0002791!2.47e-09!29;UBERON:0003528!2.47e-09!29;UBERON:0001893!2.47e-09!29;UBERON:0007811!2.55e-09!86;UBERON:0000153!2.80e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-18,29;UBERON:0002791,1.07e-18,29;UBERON:0001893,1.07e-18,29;UBERON:0002020,1.08e-18,34;UBERON:0002780,5.13e-16,39;UBERON:0001890,5.13e-16,39;UBERON:0006240,5.13e-16,39;UBERON:0000369,1.40e-15,5;UBERON:0002435,1.40e-15,5;UBERON:0000204,1.40e-15,5;UBERON:0010082,1.40e-15,5;UBERON:0003080,1.43e-15,40;UBERON:0000073,3.20e-15,54;UBERON:0001049,1.25e-13,52;UBERON:0005068,1.25e-13,52;UBERON:0006241,1.25e-13,52;UBERON:0007135,1.25e-13,52;UBERON:0002616,2.71e-13,46;UBERON:0000955,5.70e-13,47;UBERON:0006238,5.70e-13,47;UBERON:0001017,1.95e-12,73;UBERON:0003056,2.30e-12,49;UBERON:0001016,4.84e-12,75;UBERON:0001954,2.28e-11,7;UBERON:0003022,2.28e-11,7;UBERON:0002421,2.28e-11,7;UBERON:0000349,2.28e-11,7;UBERON:0002600,2.28e-11,7;UBERON:0000956,8.75e-11,21;UBERON:0001869,8.75e-11,21;UBERON:0000203,8.75e-11,21;UBERON:0002346,1.10e-10,64;UBERON:0003075,1.10e-10,64;UBERON:0007284,1.10e-10,64;UBERON:0002420,8.34e-10,8;UBERON:0007245,8.34e-10,8;UBERON:0010009,8.34e-10,8;UBERON:0010011,8.34e-10,8;UBERON:0000454,8.34e-10,8;UBERON:0010371,4.14e-09,73;UBERON:0004121,5.32e-09,95;UBERON:0000924,5.32e-09,95;UBERON:0006601,5.32e-09,95;UBERON:0010314,8.68e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,4.04389488003063,5.26523159493594,5.04779907243317,0.285650984403804,0.662605622854841,5.02212276781312,4.31304619582064,2.75765635983006,1.10115880999389,0.127687338085188,0.307213066512487,1.84640802822271,1.28082701043374,3.64639359389732,0.558365998002762,0,0.763991238884051,1.47314292736834,0.854230084794618,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,0.915001205637253,5.78010019719176,0.695297280769106,0.255715457330331,0.62336413367868,0.486723789203273,0,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0.753524089178575,0.884474488967262,0.640568601424249,0.843315521037559,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.85228302282712,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.836353184057875,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.518936737920883,1.59609949360412,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0,0.412070114477788,0,1.01078884705519,1.01391719956096,0.754505365544305,0.187283014939765,0.640251524048693,0.918967503289812,0.476293691283074,0.927074607558844,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.118635018124174,0.689531376628944,0,0.619747364743864,0.771626443924566,1.49886346762768,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p15@Trim2 | |||
}} |
Latest revision as of 18:31, 25 September 2015
Short description: | p15@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | -21bp_to_ENSMUST00000136805, uc008ppz.2_5end |
EntrezGene: | Trim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.45e-29 | 6 |
CNS neuron (sensu Vertebrata) | 4.69e-28 | 23 |
neuroblast (sensu Vertebrata) | 4.69e-28 | 23 |
neuron | 5.19e-19 | 33 |
neuronal stem cell | 5.19e-19 | 33 |
neuroblast | 5.19e-19 | 33 |
electrically signaling cell | 5.19e-19 | 33 |
electrically responsive cell | 8.36e-16 | 39 |
electrically active cell | 8.36e-16 | 39 |
hippocampal neuron | 2.39e-15 | 3 |
striatum neuron | 1.22e-14 | 3 |
neural cell | 3.67e-14 | 43 |
ectodermal cell | 8.50e-14 | 44 |
neurectodermal cell | 8.50e-14 | 44 |
embryonic cell | 5.77e-08 | 70 |