FFCP PHASE1:Hg19::chr7:87835758..87835769,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11292 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-166bp_to_AL117616_5end | |||
|cluster_id=chr7:87835758..87835769,- | |||
|description=CAGE_peak_6_at_SRI_5end | |||
|id=chr7:87835758..87835769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.07e-13;2!CL:0002598;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,7.30e-14,2;CL:0002363,1.55e-13,2;CL:0000008,1.55e-13,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.07e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-28!57;UBERON:0005068!1.40e-28!57;UBERON:0006241!1.40e-28!57;UBERON:0007135!1.40e-28!57;UBERON:0002020!1.63e-24!34;UBERON:0003528!1.63e-24!34;UBERON:0001017!5.25e-23!82;UBERON:0007023!3.36e-22!115;UBERON:0002616!1.15e-21!59;UBERON:0003075!1.87e-21!86;UBERON:0007284!1.87e-21!86;UBERON:0005743!2.23e-21!86;UBERON:0000955!6.97e-21!69;UBERON:0006238!6.97e-21!69;UBERON:0002791!8.99e-21!33;UBERON:0000073!1.42e-20!94;UBERON:0001016!1.42e-20!94;UBERON:0001893!5.69e-20!34;UBERON:0002346!5.87e-20!90;UBERON:0001869!1.06e-19!32;UBERON:0002780!5.65e-19!41;UBERON:0001890!5.65e-19!41;UBERON:0006240!5.65e-19!41;UBERON:0003080!2.37e-18!42;UBERON:0002619!1.10e-17!22;UBERON:0000956!4.69e-15!25;UBERON:0000203!4.69e-15!25;UBERON:0001950!1.02e-14!20;UBERON:0000033!2.32e-13!123;UBERON:0000153!4.45e-13!129;UBERON:0007811!4.45e-13!129;UBERON:0003056!1.12e-12!61;UBERON:0004121!5.91e-12!169;UBERON:0003076!9.13e-12!15;UBERON:0003057!9.13e-12!15;UBERON:0002308!1.20e-11!9;UBERON:0000125!1.20e-11!9;UBERON:0000924!2.27e-11!173;UBERON:0006601!2.27e-11!173;UBERON:0000064!2.19e-10!219;UBERON:0000025!3.92e-10!194;UBERON:0002298!2.42e-09!8;UBERON:0000477!7.14e-09!286;UBERON:0002420!1.04e-08!9;UBERON:0007245!1.04e-08!9;UBERON:0010009!1.04e-08!9;UBERON:0010011!1.04e-08!9;UBERON:0000454!1.04e-08!9;UBERON:0009663!1.82e-08!7;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0001871!1.51e-07!7;UBERON:0004111!1.77e-07!241;UBERON:0004732!7.33e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;5.92e-26;1!UBERON:0002148;6.43e-14;2!UBERON:0006331;6.43e-14;2!UBERON:0009662;6.43e-14;2!UBERON:0002360;1.07e-13;2!UBERON:0001954;1.07e-13;2!UBERON:0003566;1.07e-13;2!UBERON:0000094;1.07e-13;2!UBERON:0003022;1.07e-13;2!UBERON:0001777;1.07e-13;2!UBERON:0002421;1.07e-13;2!UBERON:0002600;1.07e-13;2!UBERON:0010743;1.07e-13;2!UBERON:0000125;4.42e-12;9!UBERON:0002308;4.42e-12;9!UBERON:0003528;5.34e-11;34!UBERON:0002020;5.34e-11;34!UBERON:0000988;1.01e-09;3!UBERON:0005383;1.41e-09;3!UBERON:0005382;1.41e-09;3!UBERON:0002791;1.04e-07;32!UBERON:0000369;1.69e-07;4!UBERON:0002435;1.69e-07;4!UBERON:0003891;1.69e-07;4!UBERON:0000964;1.69e-07;4!UBERON:0010409;1.69e-07;4!UBERON:0000204;1.69e-07;4!UBERON:0001869;6.29e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,9.79e-26,1;UBERON:0002148,6.43e-14,2;UBERON:0006331,6.43e-14,2;UBERON:0009662,6.43e-14,2;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002360,9.40e-14,2;UBERON:0000094,9.40e-14,2;UBERON:0010743,9.40e-14,2;UBERON:0003566,1.55e-13,2;UBERON:0001777,1.55e-13,2;UBERON:0000125,4.94e-12,9;UBERON:0002308,4.94e-12,9;UBERON:0003528,8.37e-12,34;UBERON:0002020,8.37e-12,34;UBERON:0000988,1.01e-09,3;UBERON:0005383,1.67e-09,3;UBERON:0005382,1.67e-09,3;UBERON:0000073,8.61e-08,53;UBERON:0002616,8.61e-08,53;UBERON:0001017,1.03e-07,81;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0000369,1.92e-07,4;UBERON:0002435,1.92e-07,4;UBERON:0000204,1.92e-07,4;UBERON:0010082,1.92e-07,4;UBERON:0002791,2.03e-07,32;UBERON:0001869,2.03e-07,32;UBERON:0003891,2.04e-07,4;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4;UBERON:0001049,2.12e-07,56;UBERON:0005068,2.12e-07,56;UBERON:0006241,2.12e-07,56;UBERON:0007135,2.12e-07,56;UBERON:0002346,2.42e-07,86;UBERON:0001893,4.98e-07,34;UBERON:0001016,5.66e-07,89;UBERON:0003056,8.79e-07,61;UBERON:0010314,9.12e-07,132 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,1.53569778007781,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,2.19781025814636,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.732157589411779,0.500763722825999,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.957803154342908,0.615349092722265,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,1.44680757550829,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,1.09980912941201,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0.655678681511872,0,0,0,0.981542335574726,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,0,0.476128862927481,0,0,0,0.0636471582781649,1.21270313374932,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p6@SRI | |||
}} |
Latest revision as of 21:49, 19 September 2015
Short description: | p6@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SRI_5end |
Coexpression cluster: | NA |
Association with transcript: | -166bp_to_AL117616_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 7.30e-14 | 2 |
keratocyte | 1.55e-13 | 2 |
migratory cranial neural crest cell | 1.55e-13 | 2 |