FFCP PHASE1:Hg19::chr7:76139845..76139887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80761 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21444 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BT76 | |||
|association_with_transcript=3bp_to_ENST00000257632_5end | |||
|cluster_id=chr7:76139845..76139887,+ | |||
|coexpression_cluster_id=C1193 | |||
|description=CAGE_peak_1_at_UPK3B_5end | |||
|id=chr7:76139845..76139887,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.92e-23!254;CL:0002076!1.06e-13!43;CL:0000223!5.35e-10!59;CL:0000077!6.29e-10!19;CL:0002368!3.32e-08!13;CL:0000076!4.13e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.50e-11;19!CL:0002076;2.46e-08;42!CL:0002368;2.91e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.04e-16,253;CL:0000077,1.74e-11,19;CL:0002076,6.95e-11,42;CL:0000223,2.68e-08,58;CL:0002368,3.54e-08,13;CL:0000076,9.85e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.31e-17!106;DOID:0050687!2.94e-12!143;DOID:299!4.62e-10!25;DOID:162!4.80e-08!235;DOID:14566!2.18e-07!239;DOID:1749!6.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;9.37e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.11e-11,106;DOID:299,9.95e-09,25;DOID:0050687,4.63e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.24e-20!169;UBERON:0000925!4.24e-20!169;UBERON:0006595!4.24e-20!169;UBERON:0001007!3.58e-16!155;UBERON:0001555!3.58e-16!155;UBERON:0007026!3.58e-16!155;UBERON:0004921!3.19e-15!129;UBERON:0004185!3.19e-15!129;UBERON:0000077!2.75e-14!130;UBERON:0000065!3.67e-12!53;UBERON:0001004!7.35e-12!72;UBERON:0001041!1.17e-11!98;UBERON:0000063!5.12e-11!97;UBERON:0000464!2.36e-10!104;UBERON:0008947!4.78e-10!38;UBERON:0003258!4.78e-10!38;UBERON:0005177!5.97e-10!107;UBERON:0001048!1.18e-09!168;UBERON:0000466!2.14e-09!126;UBERON:0000064!5.32e-09!219;UBERON:0005911!1.04e-08!82;UBERON:0000072!1.34e-08!46;UBERON:0005181!3.33e-08!35;UBERON:0005409!7.92e-08!35;UBERON:0004458!1.01e-07!49;UBERON:0005178!1.54e-07!34;UBERON:0002224!1.54e-07!34;UBERON:0002323!1.68e-07!46;UBERON:0000062!5.27e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005181;1.29e-07;35!UBERON:0005178;2.26e-07;34!UBERON:0002224;2.26e-07;34!UBERON:0002075;4.40e-07;18!UBERON:0000486;5.91e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.03e-13,160;UBERON:0000925,4.03e-13,160;UBERON:0006595,4.03e-13,160;UBERON:0005177,7.23e-12,101;UBERON:0001007,5.48e-10,145;UBERON:0001555,5.48e-10,145;UBERON:0007026,5.48e-10,145;UBERON:0004921,8.76e-10,118;UBERON:0005181,4.12e-09,35;UBERON:0005178,2.96e-08,34;UBERON:0002224,2.96e-08,34;UBERON:0003886,4.41e-08,54;UBERON:0000065,8.51e-08,54;UBERON:0005911,1.03e-07,82;UBERON:0001004,1.12e-07,74;UBERON:0002075,3.64e-07,18;UBERON:0002323,5.09e-07,46;UBERON:0004458,6.84e-07,49;UBERON:0001041,6.87e-07,87 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,1.22866968250754,3.48900583986214,1.31064823278103,0.263766978228454,0,0,0,0,0,0,0.369363174230364,1.02000345622126,0,0,0,0,0,0,0,0,0,3.56077083626975,0.919421224478927,3.0120591877825,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.87834785693126,20.1707776266477,12.750335090239,12.977455497455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,8.86670955495893,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.63647672354501,15.4874481510062,0.365921118388786,0.397589304964456,0.929551542956147,0.518305275076852,4.54177531576131,0,0,0,0,0,0,0.591534000199219,0.674338760312407,0.482022059766964,0.882351781859152,1.30727666455444,0.474541238222193,0.539325232640658,0.784885860501384,0,0,0,55.9740655410704,10.2906097969879,0,0,1.77236972004421,0,3.32068784066407,0.514703430895577,0.878002283269004,2.24803506515239,2.91534019993729,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,26.8669495306154,29.1885295112257,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,157.351354825104,57.5212082676194,513.061390746317,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,3.77457766191941,0,0,0,0.606255142892519,0,2.72151263996712,0,0,0,0.768834895534206,0.511707249066704,0,0,0,0,0,0,0,0.966875596732978,0.40101294060657,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,1.08378575017541,6.52196706011309,0,0,0,0,0,145.663671066109,278.81244884475,35.1408666237447,0.721287081534056,0,0,0,6.50060246036521,0,0,0,0,0.137836572484531,0,0.145016693914229,0.426133137080504,0,1.15699440752685,2.30628080838127,2.29702882490251,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02770547529675,0,0,0,0,0,0,0.329294892959902,0,0,9.81465549800223,7.37332503089366,2.17781969722645,0.564862804660675,42.6200318944518,0,74.9396959476982,22.9723400206959,0,0,0,0,0,0,0,0,4.3797869162264,1.92495971052672,8.08632712737405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.293016358543788,0.485442086998054,0.557216921387392,4.54617834890261,11.6984797521468,143.136976161332,112.11365626622,0,0,0,0,0.211125408127993,27.0977264021455,9.66993704359017,0,0.511343412510774,0,0,5.30223271769228,1.25314822272926,0,5.52403071566828,0,0,0,0.0927680981618513,0,0,0,0,7.73795448341398,0.254253650292766,24.5843189038654,0,0,0.347249989866585,0,0,0,0,0.295547618953547,0,0.21787692703798,6.13464474825854,0.615602068030377,0,0,0.0897576444097721,0.217294743844016,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0,209.264460060027,1.69623685720729,0,0,9.55341696636063,1.83309043480088,0,0,0,0.202203398942031,77.8500317879825,0.234264445725339,0,17.6098157038881,2.42780379534093,0,1.20990716048664,0,0.821425535170343,0,0,5.98188485436467,4.30289542638149,9.10405463380953,4.77889719091835,8.82289592692358,0,33.6705892370154,24.1061297639369,0.435296032902013,11.881413440458,1.37588825977293,1.06431964417994,1.5348756588099,1.23173185579814,13.190506242425,0.794305140223502,0.225980740780532,0,0,0,1.56441106187842,8.17619966565644,2.98834192635094,25.1760108073484,40.777588054612,0,0,0,0,2.35694034616795,14.6776542559503,16.318044024724,0,0,0,0,0,0.429765441419957,0,4.46851842035607,0.458320848023367,0,47.7232811192589,9.01374701086799,2.00854311697685,3.96382487671685,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,2.88832816854191,2.07720169014593,0,0,0,2.68347750079413,0.157611414598396,0.786818822024972,0,0,1.53532157855556,20.0114691384543,0.662091970365432,115.437916095256,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0,8.04108138056348,4.9337051562167,44.1032013904579,10.6898927467773,41.8381445900667,0,0,0,3.83004754662109,0,0,0,0,0.314108192500469,0,0,0,6.30750115259078,1.77486482458964,0.496771223531068,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,1.59296767163702,0,0.310525913752519,0,0,2.60872530905867,10.8185478477997,9.90093551638868,2.03435366602331,0,3.7593694964871,0,0,0,0,0,0,2.11881813448034,186.993067678935,98.65584236285,0.453411851024545,0,1.22368352253234,2.50724377514082,743.902686210782,299.761295774093,0.176689145945881,761.431709055301,45.1076316543704,2.30617366729152,3.10887307558079,0,0,0,0,0,0,0.983091635014877,2.11312123358627,0,0,0,0,0,1.81843360035278,4.35454082023081,8.56892287734466,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,9.71662413160154,0.11796972334774,4.95257216008533,0.924205329202706,0,0,0,16.0197999383918,0,0,0,0.49131575253029,4.13997041407727,0.0675375846183947,0,0,0,0,0,0,0,6.26035895434017,0,0,0,0,0.3548094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| |||
|short_description=p1@UPK3B | |||
}} |
Latest revision as of 14:06, 19 September 2015
Short description: | p1@UPK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UPK3B_5end |
Coexpression cluster: | C1193_mesothelioma_Mesothelial_Retinal_clear_amniotic_serous_Urothelial |
Association with transcript: | 3bp_to_ENST00000257632_5end |
EntrezGene: | UPK3B |
HGNC: | 21444 |
UniProt: | Q9BT76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.04e-16 | 253 |
mesothelial cell | 1.74e-11 | 19 |
endo-epithelial cell | 6.95e-11 | 42 |
endodermal cell | 2.68e-08 | 58 |
respiratory epithelial cell | 3.54e-08 | 13 |
squamous epithelial cell | 9.85e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.03e-13 | 160 |
endoderm | 4.03e-13 | 160 |
presumptive endoderm | 4.03e-13 | 160 |
trunk region element | 7.23e-12 | 101 |
digestive system | 5.48e-10 | 145 |
digestive tract | 5.48e-10 | 145 |
primitive gut | 5.48e-10 | 145 |
subdivision of digestive tract | 8.76e-10 | 118 |
thoracic segment organ | 4.12e-09 | 35 |
thoracic cavity element | 2.96e-08 | 34 |
thoracic cavity | 2.96e-08 | 34 |
body cavity precursor | 4.41e-08 | 54 |
respiratory tract | 8.51e-08 | 54 |
endo-epithelium | 1.03e-07 | 82 |
respiratory system | 1.12e-07 | 74 |
viscus | 3.64e-07 | 18 |
body cavity | 5.09e-07 | 46 |
body cavity or lining | 6.84e-07 | 49 |
foregut | 6.87e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.11e-11 | 106 |
adenocarcinoma | 9.95e-09 | 25 |
cell type cancer | 4.63e-08 | 143 |