FFCP PHASE1:Mm9::chr3:141594518..141594529,-: Difference between revisions
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{{FFCP|EntrezGene=12167|HGNC=|UniProt=P36898,B2RRZ4,Q3USS1|association_with_transcript=-31bp_to_ENSMUST00000106232,uc008rog.1,uc008roh.1_5end|description=CAGE_peak_12_at_Bmpr1b_5end|id=chr3:141594518..141594529,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.96e-25!71;UBERON:0003075!1.96e-25!71;UBERON:0007284!1.96e-25!71;UBERON:0000033!1.66e-23!63;UBERON:0003056!1.67e-21!49;UBERON:0001049!2.29e-20!52;UBERON:0005068!2.29e-20!52;UBERON:0006241!2.29e-20!52;UBERON:0007135!2.29e-20!52;UBERON:0004121!2.09e-16!102;UBERON:0000924!2.09e-16!102;UBERON:0006601!2.09e-16!102;UBERON:0002616!5.15e-16!49;UBERON:0000955!1.57e-15!50;UBERON:0006238!1.57e-15!50;UBERON:0007811!2.41e-14!86;UBERON:0001017!3.20e-14!73;UBERON:0005743!3.20e-14!73;UBERON:0000970!8.53e-14!9;UBERON:0000019!8.53e-14!9;UBERON:0000047!8.53e-14!9;UBERON:0004088!8.53e-14!9;UBERON:0002104!8.53e-14!9;UBERON:0001456!8.53e-14!9;UBERON:0003072!8.53e-14!9;UBERON:0003071!8.53e-14!9;UBERON:0004128!8.53e-14!9;UBERON:0000073!1.38e-13!75;UBERON:0001016!1.38e-13!75;UBERON:0002020!5.28e-13!34;UBERON:0000153!3.06e-12!94;UBERON:0003080!1.23e-11!40;UBERON:0001444!7.42e-11!11;UBERON:0002780!1.25e-10!39;UBERON:0001890!1.25e-10!39;UBERON:0006240!1.25e-10!39;UBERON:0003076!1.27e-10!12;UBERON:0003057!1.27e-10!12;UBERON:0002791!8.11e-10!29;UBERON:0003528!8.11e-10!29;UBERON:0001893!8.11e-10!29;UBERON:0000020!9.30e-10!12;UBERON:0001032!9.30e-10!12;UBERON:0004456!9.30e-10!12;UBERON:0005085!7.85e-09!13;UBERON:0000956!4.83e-07!21;UBERON:0001869!4.83e-07!21;UBERON:0000203!4.83e-07!21;UBERON:0002298!9.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.32e-14,9;UBERON:0000019,1.32e-14,9;UBERON:0000047,1.32e-14,9;UBERON:0010312,1.32e-14,9;UBERON:0004088,1.32e-14,9;UBERON:0002104,1.32e-14,9;UBERON:0001456,1.32e-14,9;UBERON:0003072,1.32e-14,9;UBERON:0004128,1.32e-14,9;UBERON:0003071,1.32e-14,9;UBERON:0001444,5.16e-12,11;UBERON:0000020,4.87e-11,12;UBERON:0001032,4.87e-11,12;UBERON:0004456,4.87e-11,12;UBERON:0000033,3.26e-10,13;UBERON:0005085,3.26e-10,13;UBERON:0003056,6.13e-10,49;UBERON:0002346,1.86e-09,64;UBERON:0003075,1.86e-09,64;UBERON:0007284,1.86e-09,64;UBERON:0002259,4.39e-09,1;UBERON:0002314,4.39e-09,1;UBERON:0004061,4.39e-09,1;UBERON:0006777,4.39e-09,1;UBERON:0005882,4.39e-09,1;UBERON:0010371,3.34e-08,73;UBERON:0004121,1.11e-07,95;UBERON:0000924,1.11e-07,95;UBERON:0006601,1.11e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0,0.45839474333043,0.883885756421003,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.04853447583376,1.83000241127451,0.125654352112864,0.173824320192276,0.255715457330331,0.83115217823824,1.1356888414743,0,0,0,0.631325567659422,1.04096354370163,1.14951052216736,2.16074555766419,2.10986744970001,0.816437989815934,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,2.83880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p12@Bmpr1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12167 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P36898,B2RRZ4,Q3USS1 | |||
|association_with_transcript=-31bp_to_ENSMUST00000106232,uc008rog.1,uc008roh.1_5end | |||
|cluster_id=chr3:141594518..141594529,- | |||
|description=CAGE_peak_12_at_Bmpr1b_5end | |||
|id=chr3:141594518..141594529,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.96e-25!71;UBERON:0003075!1.96e-25!71;UBERON:0007284!1.96e-25!71;UBERON:0000033!1.66e-23!63;UBERON:0003056!1.67e-21!49;UBERON:0001049!2.29e-20!52;UBERON:0005068!2.29e-20!52;UBERON:0006241!2.29e-20!52;UBERON:0007135!2.29e-20!52;UBERON:0004121!2.09e-16!102;UBERON:0000924!2.09e-16!102;UBERON:0006601!2.09e-16!102;UBERON:0002616!5.15e-16!49;UBERON:0000955!1.57e-15!50;UBERON:0006238!1.57e-15!50;UBERON:0007811!2.41e-14!86;UBERON:0001017!3.20e-14!73;UBERON:0005743!3.20e-14!73;UBERON:0000970!8.53e-14!9;UBERON:0000019!8.53e-14!9;UBERON:0000047!8.53e-14!9;UBERON:0004088!8.53e-14!9;UBERON:0002104!8.53e-14!9;UBERON:0001456!8.53e-14!9;UBERON:0003072!8.53e-14!9;UBERON:0003071!8.53e-14!9;UBERON:0004128!8.53e-14!9;UBERON:0000073!1.38e-13!75;UBERON:0001016!1.38e-13!75;UBERON:0002020!5.28e-13!34;UBERON:0000153!3.06e-12!94;UBERON:0003080!1.23e-11!40;UBERON:0001444!7.42e-11!11;UBERON:0002780!1.25e-10!39;UBERON:0001890!1.25e-10!39;UBERON:0006240!1.25e-10!39;UBERON:0003076!1.27e-10!12;UBERON:0003057!1.27e-10!12;UBERON:0002791!8.11e-10!29;UBERON:0003528!8.11e-10!29;UBERON:0001893!8.11e-10!29;UBERON:0000020!9.30e-10!12;UBERON:0001032!9.30e-10!12;UBERON:0004456!9.30e-10!12;UBERON:0005085!7.85e-09!13;UBERON:0000956!4.83e-07!21;UBERON:0001869!4.83e-07!21;UBERON:0000203!4.83e-07!21;UBERON:0002298!9.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.32e-14,9;UBERON:0000019,1.32e-14,9;UBERON:0000047,1.32e-14,9;UBERON:0010312,1.32e-14,9;UBERON:0004088,1.32e-14,9;UBERON:0002104,1.32e-14,9;UBERON:0001456,1.32e-14,9;UBERON:0003072,1.32e-14,9;UBERON:0004128,1.32e-14,9;UBERON:0003071,1.32e-14,9;UBERON:0001444,5.16e-12,11;UBERON:0000020,4.87e-11,12;UBERON:0001032,4.87e-11,12;UBERON:0004456,4.87e-11,12;UBERON:0000033,3.26e-10,13;UBERON:0005085,3.26e-10,13;UBERON:0003056,6.13e-10,49;UBERON:0002346,1.86e-09,64;UBERON:0003075,1.86e-09,64;UBERON:0007284,1.86e-09,64;UBERON:0002259,4.39e-09,1;UBERON:0002314,4.39e-09,1;UBERON:0004061,4.39e-09,1;UBERON:0006777,4.39e-09,1;UBERON:0005882,4.39e-09,1;UBERON:0010371,3.34e-08,73;UBERON:0004121,1.11e-07,95;UBERON:0000924,1.11e-07,95;UBERON:0006601,1.11e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0,0.45839474333043,0.883885756421003,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.04853447583376,1.83000241127451,0.125654352112864,0.173824320192276,0.255715457330331,0.83115217823824,1.1356888414743,0,0,0,0.631325567659422,1.04096354370163,1.14951052216736,2.16074555766419,2.10986744970001,0.816437989815934,0.640568601424249,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,2.83880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p12@Bmpr1b | |||
}} |
Latest revision as of 17:14, 1 October 2015
Short description: | p12@Bmpr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Bmpr1b_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENSMUST00000106232, uc008rog.1, uc008roh.1_5end |
EntrezGene: | Bmpr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.32e-14 | 9 |
camera-type eye | 1.32e-14 | 9 |
simple eye | 1.32e-14 | 9 |
immature eye | 1.32e-14 | 9 |
ocular region | 1.32e-14 | 9 |
visual system | 1.32e-14 | 9 |
face | 1.32e-14 | 9 |
optic cup | 1.32e-14 | 9 |
optic vesicle | 1.32e-14 | 9 |
eye primordium | 1.32e-14 | 9 |
subdivision of head | 5.16e-12 | 11 |
sense organ | 4.87e-11 | 12 |
sensory system | 4.87e-11 | 12 |
entire sense organ system | 4.87e-11 | 12 |
head | 3.26e-10 | 13 |
ectodermal placode | 3.26e-10 | 13 |
pre-chordal neural plate | 6.13e-10 | 49 |
neurectoderm | 1.86e-09 | 64 |
neural plate | 1.86e-09 | 64 |
presumptive neural plate | 1.86e-09 | 64 |
corpora quadrigemina | 4.39e-09 | 1 |
midbrain tectum | 4.39e-09 | 1 |
neural tube mantle layer | 4.39e-09 | 1 |
tectal plate | 4.39e-09 | 1 |
neural tube alar plate | 4.39e-09 | 1 |
ecto-epithelium | 3.34e-08 | 73 |
ectoderm-derived structure | 1.11e-07 | 95 |
ectoderm | 1.11e-07 | 95 |
presumptive ectoderm | 1.11e-07 | 95 |