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FFCP PHASE1:Mm9::chr3:135102434..135102464,+: Difference between revisions

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{{FFCP|EntrezGene=66105|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=303bp_to_uc008rlq.1_5end|description=CAGE_peak_9_at_Ube2d3_5end|id=chr3:135102434..135102464,+|ontology_enrichment_celltype=CL:0000219!4.01e-09!54;CL:0002320!2.46e-08!46;CL:0000134!2.46e-08!46;CL:0000063!1.71e-07!66|ontology_enrichment_celltype_v019_2=CL:0000219,7.25e-10,54;CL:0002320,4.53e-09,46;CL:0000134,4.53e-09,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.80e-15!70;UBERON:0004119!5.97e-11!130;UBERON:0000925!5.97e-11!130;UBERON:0006595!5.97e-11!130;UBERON:0001007!3.40e-10!128;UBERON:0001555!3.40e-10!128;UBERON:0007026!3.40e-10!128;UBERON:0000490!5.17e-10!66;UBERON:0002193!7.48e-10!48;UBERON:0004921!1.69e-09!126;UBERON:0004185!1.69e-09!126;UBERON:0005057!2.23e-09!51;UBERON:0002390!1.52e-08!45;UBERON:0003061!1.52e-08!45;UBERON:0003929!1.76e-08!55;UBERON:0002384!2.46e-08!46;UBERON:0003081!8.03e-08!88;UBERON:0005911!2.29e-07!69;UBERON:0000077!3.36e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.09e-13,118;UBERON:0000925,2.09e-13,118;UBERON:0006595,2.09e-13,118;UBERON:0001007,1.49e-12,116;UBERON:0001555,1.49e-12,116;UBERON:0007026,1.49e-12,116;UBERON:0004921,9.17e-12,114;UBERON:0002193,3.21e-10,48;UBERON:0002405,3.21e-10,48;UBERON:0000490,4.37e-10,66;UBERON:0002384,4.53e-09,46;UBERON:0002390,7.15e-09,45;UBERON:0003061,7.15e-09,45;UBERON:0001041,1.29e-08,80;UBERON:0003929,1.68e-08,55;UBERON:0003081,4.77e-08,87;UBERON:0005911,2.54e-07,69;UBERON:0002204,7.68e-07,32|phase1_expression=0.640595388419176,11.8651638597383,12.739978702907,5.44435580352294,5.00895729946347,3.02182689441402,3.50418960893289,13.4288256379239,21.540674489205,20.5976783163354,2.22583358693156,1.27635454392538,15.5792664237397,19.1450681297604,2.6648780945253,3.64455481301687,1.39912375625629,8.51747846467242,5.34746291062381,7.21462408056651,3.14660173558958,4.26951090163807,4.70159620450084,11.3594620183319,9.40578052375397,11.4846392823004,8.61523992318149,10.7735616342945,6.46079626151671,8.06496415231778,7.09537634096975,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,118.444451498545,97.6669180654751,76.9579903641483,135.881473735164,123.631232777479,127.689222847193,2.01434908760924,3.75094645512204,3.48738829107195,2.34717403304412,3.92445281484804,4.83309602015838,6.61061656852564,4.19959264876088,1.43752564364972,12.2481302422148,36.9934692425786,53.7750078627942,10.2903774414379,10.601737277734,11.3447860301037,0.404632921719196,0,0,3.38844532069132,3.55717918444456,13.0485459005803,11.8663963508037,9.9467216092454,5.09320187881288,4.61061966385865,0.622137673850866,0.270011876663381,0.210324961351382,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.640413505216868,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.854230084794618,0,10.6016670666458,7.63272757078534,11.0148505706638,6.88339101585109,59.837477366282,22.6675340487883,12.3457519315057,19.7131830322828,6.46044332606059,1.53387290320252,1.55871602761721,1.7666978725517,0.14084341977668,1.28326477414318,5.09610479413291,0,3.46385665617943,1.77351905832569,3.0331466700887,11.1900202124679,32.1082975722493,2.07818994690755,0.520455980298408,1.21786191324856,0.922461989024234,0.904335843315735,2.4693628498498,2.26199864393416,13.5957232253906,8.09756398751505,10.6153266233985,3.07357014900077,5.74187947997023,6.30337829075789,7.45567044872489,0.585561594023094,0.41889341362691,5.62005521458901,7.42853771936706,11.3981518888747,10.8009693012105,1.04853447583376,1.37250180845588,0.376963056338593,0.173824320192276,0.767146371990992,0.62336413367868,0.162241263067758,1.73126918545538,5.22509276562391,4.80173241023982,5.05060454127538,0.130120442962704,0.459804208866946,0.360124259610698,0.90422890701429,1.15662048557257,0.2562274405697,0.562210347358373,1.03481348295606,0,0,0.351902248327898,1.31517439456545,1.11218899690239,2.78601733217733,4.7329891373827,0.398068533636986,16.1509033082044,11.8380037272769,6.81992398549422,0.414251545071004,1.17263029990548,1.08037236876609,0.473489471170421,1.37734962223183,2.77680803197281,2.09280550275367,2.41446061259657,3.38619492864792,2.13927804887525,3.11918181750281,3.56702762001765,2.04679982395465,2.19550115291051,2.54992195644706,0.420579897128254,0.720332286654991,14.8688452342709,13.4869788998408,0.213288250535234,1.16118335930219,0.902072229254653,1.21010114774006,3.11329261382818,2.85338439168839,6.64340686162316,5.27036655116835,5.27803938480566,5.76973768919337,4.67913809085888,6.29173586057955,7.99710784536369,7.16908583715722,0.758671603812327,0.685491075658373,0,0.814605311381257,0.775809948670503,1.26244475802573,2.78240763346732,4.72352473534727,3.92496819603437,4.07210640941942,11.2651998293117,0.667380422864376,2.35870794135844,1.57403478669398,3.04290182082754,2.65294875727659,3.05551022137704,5.17853047411459,12.1601420081277,4.94210543738547,7.1884103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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66105
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=
|association_with_transcript=303bp_to_uc008rlq.1_5end
|cluster_id=chr3:135102434..135102464,+
|description=CAGE_peak_9_at_Ube2d3_5end
|id=chr3:135102434..135102464,+
|ontology_enrichment_celltype=CL:0000219!4.01e-09!54;CL:0002320!2.46e-08!46;CL:0000134!2.46e-08!46;CL:0000063!1.71e-07!66
|ontology_enrichment_celltype_v019_2=CL:0000219,7.25e-10,54;CL:0002320,4.53e-09,46;CL:0000134,4.53e-09,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.09e-13,118;UBERON:0000925,2.09e-13,118;UBERON:0006595,2.09e-13,118;UBERON:0001007,1.49e-12,116;UBERON:0001555,1.49e-12,116;UBERON:0007026,1.49e-12,116;UBERON:0004921,9.17e-12,114;UBERON:0002193,3.21e-10,48;UBERON:0002405,3.21e-10,48;UBERON:0000490,4.37e-10,66;UBERON:0002384,4.53e-09,46;UBERON:0002390,7.15e-09,45;UBERON:0003061,7.15e-09,45;UBERON:0001041,1.29e-08,80;UBERON:0003929,1.68e-08,55;UBERON:0003081,4.77e-08,87;UBERON:0005911,2.54e-07,69;UBERON:0002204,7.68e-07,32
|phase1_expression=0.640595388419176,11.8651638597383,12.739978702907,5.44435580352294,5.00895729946347,3.02182689441402,3.50418960893289,13.4288256379239,21.540674489205,20.5976783163354,2.22583358693156,1.27635454392538,15.5792664237397,19.1450681297604,2.6648780945253,3.64455481301687,1.39912375625629,8.51747846467242,5.34746291062381,7.21462408056651,3.14660173558958,4.26951090163807,4.70159620450084,11.3594620183319,9.40578052375397,11.4846392823004,8.61523992318149,10.7735616342945,6.46079626151671,8.06496415231778,7.09537634096975,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,118.444451498545,97.6669180654751,76.9579903641483,135.881473735164,123.631232777479,127.689222847193,2.01434908760924,3.75094645512204,3.48738829107195,2.34717403304412,3.92445281484804,4.83309602015838,6.61061656852564,4.19959264876088,1.43752564364972,12.2481302422148,36.9934692425786,53.7750078627942,10.2903774414379,10.601737277734,11.3447860301037,0.404632921719196,0,0,3.38844532069132,3.55717918444456,13.0485459005803,11.8663963508037,9.9467216092454,5.09320187881288,4.61061966385865,0.622137673850866,0.270011876663381,0.210324961351382,1.14260393761521,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.640413505216868,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.854230084794618,0,10.6016670666458,7.63272757078534,11.0148505706638,6.88339101585109,59.837477366282,22.6675340487883,12.3457519315057,19.7131830322828,6.46044332606059,1.53387290320252,1.55871602761721,1.7666978725517,0.14084341977668,1.28326477414318,5.09610479413291,0,3.46385665617943,1.77351905832569,3.0331466700887,11.1900202124679,32.1082975722493,2.07818994690755,0.520455980298408,1.21786191324856,0.922461989024234,0.904335843315735,2.4693628498498,2.26199864393416,13.5957232253906,8.09756398751505,10.6153266233985,3.07357014900077,5.74187947997023,6.30337829075789,7.45567044872489,0.585561594023094,0.41889341362691,5.62005521458901,7.42853771936706,11.3981518888747,10.8009693012105,1.04853447583376,1.37250180845588,0.376963056338593,0.173824320192276,0.767146371990992,0.62336413367868,0.162241263067758,1.73126918545538,5.22509276562391,4.80173241023982,5.05060454127538,0.130120442962704,0.459804208866946,0.360124259610698,0.90422890701429,1.15662048557257,0.2562274405697,0.562210347358373,1.03481348295606,0,0,0.351902248327898,1.31517439456545,1.11218899690239,2.78601733217733,4.7329891373827,0.398068533636986,16.1509033082044,11.8380037272769,6.81992398549422,0.414251545071004,1.17263029990548,1.08037236876609,0.473489471170421,1.37734962223183,2.77680803197281,2.09280550275367,2.41446061259657,3.38619492864792,2.13927804887525,3.11918181750281,3.56702762001765,2.04679982395465,2.19550115291051,2.54992195644706,0.420579897128254,0.720332286654991,14.8688452342709,13.4869788998408,0.213288250535234,1.16118335930219,0.902072229254653,1.21010114774006,3.11329261382818,2.85338439168839,6.64340686162316,5.27036655116835,5.27803938480566,5.76973768919337,4.67913809085888,6.29173586057955,7.99710784536369,7.16908583715722,0.758671603812327,0.685491075658373,0,0.814605311381257,0.775809948670503,1.26244475802573,2.78240763346732,4.72352473534727,3.92496819603437,4.07210640941942,11.2651998293117,0.667380422864376,2.35870794135844,1.57403478669398,3.04290182082754,2.65294875727659,3.05551022137704,5.17853047411459,12.1601420081277,4.94210543738547,7.18841032636773,9.30352369171258,4.36852742360385,10.6083128737787,10.0462551572271,17.3679667690812,7.57488079683079,0.568474235311454,0.651859905768103,0.509235257325564,0.234690248288502,1.17254380209271,2.85652369063216,7.80534591431195,3.31033802623001,3.76489972402917,2.71073106717728,3.4411296090305,5.18054945597687,6.94315481191256,9.04747703635634,10.8781136763742,7.37646409528554,7.72622889653251,0.160550589987792,0.35163505977661,2.45902418065013,2.01976741763498,0.315508219416257,1.17131623288992,1.07711698866399,0.716906393857656,2.67358408898873,1.69845918473299,0.809621403349789,2.04579100537918,0.790575555893047,0.963963949265421,1.41940085208269,0.35613120733451,2.28041743095006,0.989820737835213,1.32745138339963,0.728341908464944,1.51161778482376,1.32023555829129,1.47650946440386,0.922305443831782,2.84271122485043,1.81766864738753,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,2.38307724027652,0.18006109403131,0.258717367565509,0.857348140126369,1.24138163549592,0.535106452806212,1.31639216481697,1.8267896946876,12.2029288193129,9.95610733059955,2.8668691747145,6.43056386471772,8.23468576149118,5.1869115438214,4.53614907211919,5.9090723908222,3.78925087618806,0.370850604021019,8.20180227829693,4.54051109519089,5.92622487583077,3.39063222608444,3.2806614653046,5.0331198105435,10.1987057996313,9.51669875800874,12.1615976947893,6.68269432610579,0.474503990371703,1.01659733563424,1.72808545314882,5.01811910434725,3.05707589244649,5.39457385539283,6.36431609085087,5.23511883968059,6.99920855775682,1.86401793926078,1.12738587736838,0.448549638131936,0.165458490457098,0.583353565032143,0.258319646955462,0.337912250981556,0.704143431874524,1.0416350787516,0.629156066554265,0.483168241652012,0.576060012515731,10.1123558601017,1.82452693761148,3.3894615864393,4.80707045017842,3.58053391334963,5.76175928865668,8.17329056735788,6.05527061415767,5.75508764704442,5.79171730577999,7.76361625553672,8.47883562435846,7.98558285614734,6.66198342434943,10.6563280299149,9.76738194845885,6.10054224944435,12.4234616109418,1.73870634628971,7.69498149349846,2.56412273974171,14.1483130192183,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0,0.453142408984205,1.03552062350364,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,1.04806581313991,1.65459157605013,2.66696073361938,0.618105171716683,1.92551525755089,1.01078884705519,1.01391719956096,0.943131706930381,1.21733959710847,1.79270426733634,1.7230640686684,0.952587382566147,1.73826488917283,1.54327376370964,0.412085900803307,0.588795680537589,2.05721551431249,0.532427418478012,1.43061713968393,1.74415699958794,1.31753132581463,1.26921911837515,1.28049581010941,1.8414879800649,1.90125759384206,1.12228454331548,1.66089025373844,1.0835493061312,1.22769312950907,1.39443157067369,1.73615949883027,1.99848462350357,2.57324769289949,4.08255002691767,4.3996316375834,2.42650561031467,2.55054619182464
|short_description=p9@Ube2d3
}}

Latest revision as of 15:53, 1 October 2015

Short description:p9@Ube2d3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Ube2d3_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 303bp_to_uc008rlq.1_5end
EntrezGene:Ube2d3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Ube2d3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8118.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H197.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H376.96
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9135.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2123.63
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4127.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A153.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D910.60
Mouse Schwann, donor2.CNhs12573.11746-123F97.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C459.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.19
accessory axillary lymph node, adult.CNhs10475.1063-29H932.11
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.80
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G17.17
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G28.20
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.16
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G45.76
thymus, neonate N02.CNhs11181.1541-43F88.17
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C45.76
thymus, neonate N07.CNhs11211.713-19D35.79
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A28.48
thymus, neonate N25.CNhs11125.1362-25G77.99
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.42
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell7.25e-1054
connective tissue cell4.53e-0946
mesenchymal cell4.53e-0946

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.09e-13118
endoderm2.09e-13118
presumptive endoderm2.09e-13118
digestive system1.49e-12116
digestive tract1.49e-12116
primitive gut1.49e-12116
subdivision of digestive tract9.17e-12114
hemolymphoid system3.21e-1048
immune system3.21e-1048
unilaminar epithelium4.37e-1066
connective tissue4.53e-0946
hematopoietic system7.15e-0945
blood island7.15e-0945
foregut1.29e-0880
gut epithelium1.68e-0855
lateral plate mesoderm4.77e-0887
endo-epithelium2.54e-0769
musculoskeletal system7.68e-0732
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