Personal tools

FFCP PHASE1:Mm9::chr3:127492859..127492901,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=211550|HGNC=|UniProt=|association_with_transcript=25bp_to_ENSMUST00000166778_5end|description=CAGE_peak_1_at_Tifa_5end|id=chr3:127492859..127492901,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.34e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.77e-12!32;UBERON:0002371!9.00e-10!16;UBERON:0001474!2.42e-09!22;UBERON:0004765!2.42e-09!22;UBERON:0001434!2.42e-09!22;UBERON:0002405!5.38e-08!70|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.23e-13,32;UBERON:0002371,1.68e-10,16;UBERON:0001474,3.17e-10,22;UBERON:0004765,3.17e-10,22;UBERON:0001434,3.17e-10,22;UBERON:0005409,4.26e-08,47;UBERON:0004921,2.48e-07,114;UBERON:0001007,4.24e-07,116;UBERON:0001555,4.24e-07,116;UBERON:0007026,4.24e-07,116;UBERON:0000160,7.17e-07,31|phase1_expression=0.640595388419176,10.4692622291808,15.0149748998547,3.62957053568196,6.51164448930251,5.37213670118047,4.43864017131499,0.129123323441576,0,0,0,0,0,0,7.32841475994458,6.68168382386426,13.2916756844348,3.94327706697797,3.29074640653773,2.54633791078818,1.44573593256819,4.96454756004426,2.61199789138935,0.799962113967033,1.37645568640302,6.31655160526522,11.1998119001359,4.95583835177545,6.84084310042946,3.52842181663903,5.09980174507201,0,0.61506478758457,0,1.1554064790051,2.49351968037739,2.04169356262369,6.27797446105362,9.37602413428561,4.18818995179039,2.35292595212406,0.683045484958446,4.36959317728038,5.41356317294982,4.56196190487815,3.30384153891027,0.782391344348039,0.218025156380447,0,0.194429899074283,0.979904951377538,1.43752564364972,2.68452169692378,0,0.336093799142464,3.34437266846731,5.15760191889762,4.12537673821954,0.606949382578793,1.05798195854407,0.633831403506179,0,0.889294796111139,23.3973926493164,29.6659908770092,19.1829631035447,8.08920298399693,3.84218305321555,0.311068836925433,0.810035629990144,0.841299845405528,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0,1.10115880999389,1.53224805702225,0.921639199537461,1.18697658957174,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,1.47314292736834,0.854230084794618,0.372798891650601,0.530083353332288,0.302286240427142,29.5661778475711,5.16254326188832,5.439770669662,0,0.649776417447669,0.896053774194671,3.5111105032938,3.40860645156115,3.89679006904303,2.82671659608272,0.14084341977668,5.13305909657271,20.3844191765317,7.11066703153331,0.216491041011214,0,0,2.16949371466214,12.1700805314171,1.33597925158342,0.693941307064543,1.52232739156071,0.461230994512117,0.60289056221049,1.17588707135705,0.879666139307728,0.494389935468748,2.4581890676385,10.6153266233985,2.91180329905337,5.07935492458905,11.6370060752453,1.86391761218122,0.878342391034642,0.628340120440365,4.59822699375465,15.3363359367578,18.5969846607956,19.1876042880328,0.898743836428936,1.37250180845588,0.502617408451458,1.21677024134594,1.02286182932132,1.66230435647648,1.78465389374533,2.03678727700633,7.0911973247753,1.0108910337347,0.631325567659422,0.520481771850815,0.229902104433473,1.26043490863744,0.60281927134286,0.884474488967262,0.512454881139399,0.468508622798644,1.03481348295606,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,21.066395619397,15.6982223339976,15.6289924667576,0,0.234526059981096,0.900310307305074,1.65721314909647,0.787056926989615,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,1.14917224855367,0.729619285912702,2.04679982395465,2.41505126820156,2.28150911892632,1.26173969138476,0.720332286654991,0.991256348951394,7.40461586657924,0,1.16118335930219,2.31961430379768,2.21851877085677,2.66853652613844,4.1849637744763,4.2707615539006,3.29397909448022,7.54005626400809,5.57078121715222,4.874102177978,5.39291645192533,0.864552199498777,1.59313018603494,0.379335801906163,0.799739588268102,0,1.4255592949172,1.16371492300575,1.19230893813542,1.26473074248515,1.47610147979602,2.04098346193787,1.85095745882701,2.07516838961004,1.50160595144485,3.14494392181125,2.69834534861824,4.46292267054706,2.41177159752417,3.8193877767213,4.89083433666378,4.21551589615092,3.56929837144506,11.5014565221884,3.34926852901653,1.5601883655728,1.01031551178845,1.4351793081753,4.3419916922703,2.95605104266567,0.568474235311454,0.651859905768103,0.848725428875941,0.234690248288502,1.17254380209271,0.238043640886014,1.56106918286239,2.20689201748667,1.99318220683897,1.2756381492599,3.27726629431476,2.93564469172023,3.90552458170081,58.8086007363162,67.44430479352,0.491764273019036,1.10374698521893,1.12385412991454,1.17211686592203,0.491804836130026,1.00988370881749,0.631016438832513,0.390438744296638,0,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0.963963949265421,1.84522110770749,0.890328018336276,0.977321756121456,2.96946221350564,2.65490276679926,0.971122544619926,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,1.06949213515416,2.52829406348653,1.05418608574999,1.03135543248187,2.38307724027652,0.900305470156551,0.388076051348264,0.857348140126369,1.41872186913819,0.891844088010353,1.64549020602121,0.913394847343798,0.704015124191131,0.847328283455281,0.441056796109924,2.4732937941222,1.13025098687134,0.542816324353403,1.07435109602823,0.820704498725306,0.874442509889552,0.927126510052548,8.54354403989263,2.68302928352189,2.77791791054568,7.15800136617826,5.19438065339896,5.94823250336959,7.64902934972349,7.55737842547753,8.01559848065658,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,1.25452977608681,1.9652630737156,1.75323650300267,2.47960367176008,2.6175594198403,1.16653475962614,3.72803587852155,1.12738587736838,0.747582730219894,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,1.3020438484395,0.838874755405687,0.483168241652012,0.864090018773596,1.58005560314089,1.21635129174099,0.616265742988964,0.909445760844565,0.716106782669926,1.39076948346885,0.721172697119813,1.62458479892035,1.11063094942962,0.685861259894999,1.10908803650525,1.07203668813728,0.865906574762965,1.16876902181569,3.17422537061296,0,0,0,1.73870634628971,3.00291960721891,1.64836461840539,2.35805216986972,1.50471631210609,0,1.84130094602871,1.14579102687879,0.68741272937475,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,0,1.19513524027894,3.16038732188782,1.46729213839588,1.10306105070008,1.11123363900808,1.23621034343337,0.962757628775446,1.51618327058278,0.50695859978048,0.565879024158229,0.842773567228942,1.02440243847791,1.26358031702349,0.476293691283074,1.27472758539341,0.964546102318525,0.412085900803307,1.03039244094078,1.71434626192708,1.06485483695602,1.1921809497366,1.16277133305863,0.658765662907314,0.761531471025089,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,1.18205378850676,2.45538625901814,0.929621047115796,0.578719832943424,0.499621155875892,1.63752125911786,1.93383948643468,1.3390183244819,3.52946270591225,1.15933917810211|short_description=p1@Tifa}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=211550
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=25bp_to_ENSMUST00000166778_5end
|cluster_id=chr3:127492859..127492901,+
|description=CAGE_peak_1_at_Tifa_5end
|id=chr3:127492859..127492901,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,2.34e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!1.77e-12!32;UBERON:0002371!9.00e-10!16;UBERON:0001474!2.42e-09!22;UBERON:0004765!2.42e-09!22;UBERON:0001434!2.42e-09!22;UBERON:0002405!5.38e-08!70
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.23e-13,32;UBERON:0002371,1.68e-10,16;UBERON:0001474,3.17e-10,22;UBERON:0004765,3.17e-10,22;UBERON:0001434,3.17e-10,22;UBERON:0005409,4.26e-08,47;UBERON:0004921,2.48e-07,114;UBERON:0001007,4.24e-07,116;UBERON:0001555,4.24e-07,116;UBERON:0007026,4.24e-07,116;UBERON:0000160,7.17e-07,31
|phase1_expression=0.640595388419176,10.4692622291808,15.0149748998547,3.62957053568196,6.51164448930251,5.37213670118047,4.43864017131499,0.129123323441576,0,0,0,0,0,0,7.32841475994458,6.68168382386426,13.2916756844348,3.94327706697797,3.29074640653773,2.54633791078818,1.44573593256819,4.96454756004426,2.61199789138935,0.799962113967033,1.37645568640302,6.31655160526522,11.1998119001359,4.95583835177545,6.84084310042946,3.52842181663903,5.09980174507201,0,0.61506478758457,0,1.1554064790051,2.49351968037739,2.04169356262369,6.27797446105362,9.37602413428561,4.18818995179039,2.35292595212406,0.683045484958446,4.36959317728038,5.41356317294982,4.56196190487815,3.30384153891027,0.782391344348039,0.218025156380447,0,0.194429899074283,0.979904951377538,1.43752564364972,2.68452169692378,0,0.336093799142464,3.34437266846731,5.15760191889762,4.12537673821954,0.606949382578793,1.05798195854407,0.633831403506179,0,0.889294796111139,23.3973926493164,29.6659908770092,19.1829631035447,8.08920298399693,3.84218305321555,0.311068836925433,0.810035629990144,0.841299845405528,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0,1.10115880999389,1.53224805702225,0.921639199537461,1.18697658957174,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,1.47314292736834,0.854230084794618,0.372798891650601,0.530083353332288,0.302286240427142,29.5661778475711,5.16254326188832,5.439770669662,0,0.649776417447669,0.896053774194671,3.5111105032938,3.40860645156115,3.89679006904303,2.82671659608272,0.14084341977668,5.13305909657271,20.3844191765317,7.11066703153331,0.216491041011214,0,0,2.16949371466214,12.1700805314171,1.33597925158342,0.693941307064543,1.52232739156071,0.461230994512117,0.60289056221049,1.17588707135705,0.879666139307728,0.494389935468748,2.4581890676385,10.6153266233985,2.91180329905337,5.07935492458905,11.6370060752453,1.86391761218122,0.878342391034642,0.628340120440365,4.59822699375465,15.3363359367578,18.5969846607956,19.1876042880328,0.898743836428936,1.37250180845588,0.502617408451458,1.21677024134594,1.02286182932132,1.66230435647648,1.78465389374533,2.03678727700633,7.0911973247753,1.0108910337347,0.631325567659422,0.520481771850815,0.229902104433473,1.26043490863744,0.60281927134286,0.884474488967262,0.512454881139399,0.468508622798644,1.03481348295606,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,21.066395619397,15.6982223339976,15.6289924667576,0,0.234526059981096,0.900310307305074,1.65721314909647,0.787056926989615,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,1.14917224855367,0.729619285912702,2.04679982395465,2.41505126820156,2.28150911892632,1.26173969138476,0.720332286654991,0.991256348951394,7.40461586657924,0,1.16118335930219,2.31961430379768,2.21851877085677,2.66853652613844,4.1849637744763,4.2707615539006,3.29397909448022,7.54005626400809,5.57078121715222,4.874102177978,5.39291645192533,0.864552199498777,1.59313018603494,0.379335801906163,0.799739588268102,0,1.4255592949172,1.16371492300575,1.19230893813542,1.26473074248515,1.47610147979602,2.04098346193787,1.85095745882701,2.07516838961004,1.50160595144485,3.14494392181125,2.69834534861824,4.46292267054706,2.41177159752417,3.8193877767213,4.89083433666378,4.21551589615092,3.56929837144506,11.5014565221884,3.34926852901653,1.5601883655728,1.01031551178845,1.4351793081753,4.3419916922703,2.95605104266567,0.568474235311454,0.651859905768103,0.848725428875941,0.234690248288502,1.17254380209271,0.238043640886014,1.56106918286239,2.20689201748667,1.99318220683897,1.2756381492599,3.27726629431476,2.93564469172023,3.90552458170081,58.8086007363162,67.44430479352,0.491764273019036,1.10374698521893,1.12385412991454,1.17211686592203,0.491804836130026,1.00988370881749,0.631016438832513,0.390438744296638,0,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0.963963949265421,1.84522110770749,0.890328018336276,0.977321756121456,2.96946221350564,2.65490276679926,0.971122544619926,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,1.06949213515416,2.52829406348653,1.05418608574999,1.03135543248187,2.38307724027652,0.900305470156551,0.388076051348264,0.857348140126369,1.41872186913819,0.891844088010353,1.64549020602121,0.913394847343798,0.704015124191131,0.847328283455281,0.441056796109924,2.4732937941222,1.13025098687134,0.542816324353403,1.07435109602823,0.820704498725306,0.874442509889552,0.927126510052548,8.54354403989263,2.68302928352189,2.77791791054568,7.15800136617826,5.19438065339896,5.94823250336959,7.64902934972349,7.55737842547753,8.01559848065658,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,1.25452977608681,1.9652630737156,1.75323650300267,2.47960367176008,2.6175594198403,1.16653475962614,3.72803587852155,1.12738587736838,0.747582730219894,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,1.3020438484395,0.838874755405687,0.483168241652012,0.864090018773596,1.58005560314089,1.21635129174099,0.616265742988964,0.909445760844565,0.716106782669926,1.39076948346885,0.721172697119813,1.62458479892035,1.11063094942962,0.685861259894999,1.10908803650525,1.07203668813728,0.865906574762965,1.16876902181569,3.17422537061296,0,0,0,1.73870634628971,3.00291960721891,1.64836461840539,2.35805216986972,1.50471631210609,0,1.84130094602871,1.14579102687879,0.68741272937475,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,0,1.19513524027894,3.16038732188782,1.46729213839588,1.10306105070008,1.11123363900808,1.23621034343337,0.962757628775446,1.51618327058278,0.50695859978048,0.565879024158229,0.842773567228942,1.02440243847791,1.26358031702349,0.476293691283074,1.27472758539341,0.964546102318525,0.412085900803307,1.03039244094078,1.71434626192708,1.06485483695602,1.1921809497366,1.16277133305863,0.658765662907314,0.761531471025089,0.73171189149109,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,1.18205378850676,2.45538625901814,0.929621047115796,0.578719832943424,0.499621155875892,1.63752125911786,1.93383948643468,1.3390183244819,3.52946270591225,1.15933917810211
|short_description=p1@Tifa
}}

Latest revision as of 14:12, 1 October 2015

Short description:p1@Tifa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tifa_5end
Coexpression cluster:NA
Association with transcript: 25bp_to_ENSMUST00000166778_5end
EntrezGene:Tifa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tifa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E729.67
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.19
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.63
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A167.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G28.54
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.02
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor2.34e-0719

Uber anatomy
Ontology termp-valuen
musculoskeletal system1.23e-1332
bone marrow1.68e-1016
bone element3.17e-1022
skeletal element3.17e-1022
skeletal system3.17e-1022
gastrointestinal system4.26e-0847
subdivision of digestive tract2.48e-07114
digestive system4.24e-07116
digestive tract4.24e-07116
primitive gut4.24e-07116
intestine7.17e-0731
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:127492859..127492901,%2B&oldid=4306738"