FFCP PHASE1:Hg19::chr7:20257073..20257093,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30215 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZN28 | |||
|association_with_transcript=-46bp_to_ENST00000332878_5end | |||
|cluster_id=chr7:20257073..20257093,- | |||
|coexpression_cluster_id=C2889 | |||
|description=CAGE_peak_3_at_MACC1_5end | |||
|id=chr7:20257073..20257093,- | |||
|ontology_enrichment_celltype=CL:0002076!9.27e-16!43;CL:0000223!2.09e-10!59;CL:0000066!6.79e-10!254;CL:0002251!8.96e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.01e-13;42!CL:0002251;2.79e-09;20!CL:0002166;5.36e-07;3!CL:0002621;8.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.93e-16,42;CL:0000066,1.51e-11,253;CL:0000223,5.19e-10,58;CL:0002251,2.48e-09,20;CL:0002166,5.38e-07,3;CL:0002621,9.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.20e-11!14;DOID:305!7.05e-11!106;DOID:299!6.49e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.99e-09;25!DOID:1749;1.41e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.89e-11,106;DOID:299,1.62e-09,25;DOID:1749,1.29e-07,14;DOID:0050687,1.83e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.01e-15!169;UBERON:0000925!7.01e-15!169;UBERON:0006595!7.01e-15!169;UBERON:0001007!3.40e-13!155;UBERON:0001555!3.40e-13!155;UBERON:0007026!3.40e-13!155;UBERON:0004921!8.76e-11!129;UBERON:0004185!8.76e-11!129;UBERON:0001004!2.42e-09!72;UBERON:0005911!4.11e-09!82;UBERON:0000161!1.37e-08!35;UBERON:0000344!4.04e-08!12;UBERON:0000464!8.16e-08!104;UBERON:0000077!9.37e-08!130;UBERON:0005153!3.35e-07!37;UBERON:0001008!3.37e-07!45;UBERON:0002294!8.18e-07!7;UBERON:0001173!8.18e-07!7;UBERON:0004912!8.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.96e-10;7!UBERON:0001173;2.96e-10;7!UBERON:0003350;4.30e-09;8!UBERON:0000344;4.04e-08;20!UBERON:0005409;9.21e-08;22!UBERON:0004921;1.58e-07;33!UBERON:0003929;2.30e-07;7!UBERON:0005911;3.20e-07;36!UBERON:0000160;3.51e-07;17!UBERON:0004807;4.07e-07;22!UBERON:0001949;8.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.06e-14,160;UBERON:0000925,8.06e-14,160;UBERON:0006595,8.06e-14,160;UBERON:0001007,4.10e-13,145;UBERON:0001555,4.10e-13,145;UBERON:0007026,4.10e-13,145;UBERON:0004921,1.18e-11,118;UBERON:0005911,6.56e-10,82;UBERON:0003350,4.84e-09,8;UBERON:0005409,3.25e-08,25;UBERON:0000344,3.92e-08,20;UBERON:0002294,7.20e-08,9;UBERON:0001173,7.20e-08,9;UBERON:0004912,7.20e-08,9;UBERON:0005153,1.03e-07,37;UBERON:0000160,2.73e-07,17;UBERON:0000161,5.11e-07,36;UBERON:0001949,9.52e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9138655714038,10.0162719128934,14.5614945430307,0,0,0,2.75826367343678,0,0.369754010166788,0.232401601740905,0.426507697462265,0.293600439334847,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,4.48169384957604,0.645484683583826,0,0.188242339542605,0,0,2.75475503133812,3.20929027076094,5.75403413219137,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05847791642923,3.27295344709002,5.16248271700207,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04252598026766,0,1.75600456653801,1.1240175325762,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,6.04735661515894,7.3723050566041,0,0.581267877027924,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3509401852984,2.00506470303285,2.3941057123333,0,0,0,3.60959690325929,18.2526348937463,0.784349769176855,0,6.22754610467967,0,0,0,0,0,0,4.33289664176565,3.3243040357149,0.447749509444357,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.768760269460425,3.31793052485919,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.188287601553558,0.43050537267123,0,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0.557409525377156,0,0,0,0.199579371432817,0,1.48171507906718,0,0.280797178113459,0,0,0,5.0787533340481,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,2.61996756571508,0.586032717087576,0,0,0,4.05865624054073,0,1.53580351049616,0,0,0,0,0,0,0.552567831062295,3.77899121781414,0,7.75434274404738,0,10.7842021376792,4.65455054156584,0,0.493217028184668,0,1.11136990144637,0,0,0,3.9064164162785,1.04951999995435,0,0.682760689712998,6.35634125731916,0.709163045303809,0,0,0,0,0,0,0,0,0,0,1.39423744278603,1.38510465306835,0,1.38338342632836,0,0.108647371922008,0.638002319463839,0.457987967009312,1.06606955203727,0,0,0,1.35357396370308,1.37243774022418,2.3495022176618,1.13852239634511,0,0.632994193584081,30.1980695094423,9.61200885750798,0,1.99052386215701,0.973033209536731,2.4441205797345,0,0,0,0,0,0,0.182454789215666,0.586993856796269,0,0.394584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,11.0997722951619,0,0.347119476670262,2.15583274311631,7.57415097249502,0.698906672968121,0,0,0,0,2.32773639572207,0,0.90392296312213,0,0,0,3.91102765469606,7.21429382263803,1.70762395791482,0,1.87317542300338,0,0.343189995723929,0,0,0.707082103850386,0,0,0,0,0,0,0,0,2.36598618851383,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.964518890790115,1.2378549293751,1.24632101408756,6.07429507189051,0.77380195455795,0,0.335434687599266,2.83700546277113,1.41627387964495,0,0.896436696664224,2.30298236783334,0,0,0,0,0,0,0,1.4776653734881,0,0,0.146552233678082,0,0,0,0,7.04815022316672,1.06787412567695,1.10043013569766,2.07119527673598,0,0,0,1.91502377331055,0,0.5013797880454,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797189041880179,1.4720885483026,0,0,14.3692243883866,0,0,1.37771983728653,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,1.53360640352062,0.550285795565037,4.04339831526184,0,0,0,0.300841313397029,0,0.781514011233092,0.261906694481422,0,29.7190733296261,0,0,0,0,0,0,0,0,2.42748612515231,0,0,0,0,0,1.72850981333669,0,0,0,0,4.44925607568277,0.470958557103084,0,8.40816489941367,0,3.88669664193519,0,0,0,0,0,0,0.207216164163037,0,1.38251932362818,0.860454717640555,0,0,0,17.1830151408038,0,0,0,2.7482065412268,7.31507549893617,0,0,0,0,0,0,0,0,0,24.4559806578011,2.62392137567012,2.40415516554353,3.76253837089218,0.245148321753905,2.59244201811789,0,0,0,0,0,0,7.29570438251981,0.71421575442263,9.17526666460799,4.65399926797176,0.730336388246517,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0.26721740526556,0,0,0.151557396436479,0,0,0,2.77204176471275,0.714193294391221,0.0645889098360061,0.124149428591716,0.112131862580613,0.0636471582781649,0,3.26575121845442,0,1.54909721933551,4.08816570738255,0.99798106963804,8.79155300998525,0,0,0,0,0.122241444182866,0.406896178315738,1.99727032255654,0,5.44966436915496 | |||
|short_description=p3@MACC1 | |||
}} |
Latest revision as of 15:50, 17 September 2015
Short description: | p3@MACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MACC1_5end |
Coexpression cluster: | C2889_B_papillotubular_clear_small_Prostate_splenic_Intestinal |
Association with transcript: | -46bp_to_ENST00000332878_5end |
EntrezGene: | MACC1 |
HGNC: | 30215 |
UniProt: | Q6ZN28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.93e-16 | 42 |
epithelial cell | 1.51e-11 | 253 |
endodermal cell | 5.19e-10 | 58 |
epithelial cell of alimentary canal | 2.48e-09 | 20 |
epithelial cell of Malassez | 5.38e-07 | 3 |
gingival epithelial cell | 9.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.06e-14 | 160 |
endoderm | 8.06e-14 | 160 |
presumptive endoderm | 8.06e-14 | 160 |
digestive system | 4.10e-13 | 145 |
digestive tract | 4.10e-13 | 145 |
primitive gut | 4.10e-13 | 145 |
subdivision of digestive tract | 1.18e-11 | 118 |
endo-epithelium | 6.56e-10 | 82 |
epithelium of mucosa | 4.84e-09 | 8 |
gastrointestinal system | 3.25e-08 | 25 |
mucosa | 3.92e-08 | 20 |
biliary system | 7.20e-08 | 9 |
biliary tree | 7.20e-08 | 9 |
biliary bud | 7.20e-08 | 9 |
epithelial bud | 1.03e-07 | 37 |
intestine | 2.73e-07 | 17 |
orifice | 5.11e-07 | 36 |
gingival epithelium | 9.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.89e-11 | 106 |
adenocarcinoma | 1.62e-09 | 25 |
squamous cell carcinoma | 1.29e-07 | 14 |
cell type cancer | 1.83e-07 | 143 |