FFCP PHASE1:Mm9::chr2:44967789..44967800,+: Difference between revisions
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{{FFCP|EntrezGene=433424|HGNC=|MCL_coexpression_id=130|UniProt=Q80Z12|association_with_transcript=9bp_to_ENSMUST00000130827,NM_001177395,uc008jpk.1_5end|description=CAGE_peak_7_at_Gm13476_5end|id=chr2:44967789..44967800,+|ontology_enrichment_celltype=CL:0000049!6.04e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,3.12e-28,19;CL:0000557,2.35e-24,7;CL:0002320,5.74e-17,46;CL:0000134,5.74e-17,46;CL:0000988,1.84e-16,32;CL:0002032,1.84e-16,32;CL:0000037,1.84e-16,32;CL:0000837,1.84e-16,32;CL:0000763,4.93e-15,16;CL:0000219,2.68e-14,54;CL:0002092,3.30e-10,3;CL:0002540,3.30e-10,3;CL:0000723,1.11e-09,91;CL:0000048,1.11e-09,91;CL:0000034,5.30e-09,97;CL:0002194,1.94e-07,4;CL:0000766,1.94e-07,4;CL:0000234,1.94e-07,4;CL:0000576,1.94e-07,4;CL:0000235,1.94e-07,4;CL:0000864,1.94e-07,4;CL:0002009,1.94e-07,4;CL:0000040,1.94e-07,4;CL:0000559,1.94e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.26e-10!48;UBERON:0002405!2.66e-09!70;UBERON:0002371!8.03e-09!16;UBERON:0002390!4.92e-08!45;UBERON:0003061!4.92e-08!45;UBERON:0001474!4.95e-08!22;UBERON:0004765!4.95e-08!22;UBERON:0001434!4.95e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-26,16;UBERON:0001474,3.50e-19,22;UBERON:0004765,3.50e-19,22;UBERON:0001434,3.50e-19,22;UBERON:0002384,5.74e-17,46;UBERON:0002204,2.09e-16,32;UBERON:0002193,1.32e-10,48;UBERON:0002405,1.32e-10,48;UBERON:0002390,4.95e-09,45;UBERON:0003061,4.95e-09,45;UBERON:0000029,1.05e-07,1;UBERON:0001097,1.05e-07,1;UBERON:0003968,1.05e-07,1;UBERON:0001467,1.05e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0.788655413395594,1.91960207048034,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09409497589519,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,3.5995988691256,0.988866362566974,3.5524005747305,0,1.15265491596466,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0,0,0,2.39630249011841,3.59941638596045,4.70159840170339,0,0,0,0,0,0,0.162241263067758,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12877143507205,4.88961023517959,3.40996199274711,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.927471342481686|short_description=p7@Gm13476}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433424 | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|TSSclassifier=NA | |||
|UniProt=Q80Z12 | |||
|association_with_transcript=9bp_to_ENSMUST00000130827,NM_001177395,uc008jpk.1_5end | |||
|cluster_id=chr2:44967789..44967800,+ | |||
|description=CAGE_peak_7_at_Gm13476_5end | |||
|id=chr2:44967789..44967800,+ | |||
|ontology_enrichment_celltype=CL:0000049!6.04e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.12e-28,19;CL:0000557,2.35e-24,7;CL:0002320,5.74e-17,46;CL:0000134,5.74e-17,46;CL:0000988,1.84e-16,32;CL:0002032,1.84e-16,32;CL:0000037,1.84e-16,32;CL:0000837,1.84e-16,32;CL:0000763,4.93e-15,16;CL:0000219,2.68e-14,54;CL:0002092,3.30e-10,3;CL:0002540,3.30e-10,3;CL:0000723,1.11e-09,91;CL:0000048,1.11e-09,91;CL:0000034,5.30e-09,97;CL:0002194,1.94e-07,4;CL:0000766,1.94e-07,4;CL:0000234,1.94e-07,4;CL:0000576,1.94e-07,4;CL:0000235,1.94e-07,4;CL:0000864,1.94e-07,4;CL:0002009,1.94e-07,4;CL:0000040,1.94e-07,4;CL:0000559,1.94e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.26e-10!48;UBERON:0002405!2.66e-09!70;UBERON:0002371!8.03e-09!16;UBERON:0002390!4.92e-08!45;UBERON:0003061!4.92e-08!45;UBERON:0001474!4.95e-08!22;UBERON:0004765!4.95e-08!22;UBERON:0001434!4.95e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-26,16;UBERON:0001474,3.50e-19,22;UBERON:0004765,3.50e-19,22;UBERON:0001434,3.50e-19,22;UBERON:0002384,5.74e-17,46;UBERON:0002204,2.09e-16,32;UBERON:0002193,1.32e-10,48;UBERON:0002405,1.32e-10,48;UBERON:0002390,4.95e-09,45;UBERON:0003061,4.95e-09,45;UBERON:0000029,1.05e-07,1;UBERON:0001097,1.05e-07,1;UBERON:0003968,1.05e-07,1;UBERON:0001467,1.05e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0.788655413395594,1.91960207048034,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09409497589519,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,3.5995988691256,0.988866362566974,3.5524005747305,0,1.15265491596466,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0,0,0,2.39630249011841,3.59941638596045,4.70159840170339,0,0,0,0,0,0,0.162241263067758,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12877143507205,4.88961023517959,3.40996199274711,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.927471342481686 | |||
|short_description=p7@Gm13476 | |||
}} |
Latest revision as of 17:45, 26 September 2015
Short description: | p7@Gm13476 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gm13476_5end |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | 9bp_to_ENSMUST00000130827, NM_001177395, uc008jpk.1_5end |
EntrezGene: | Gm13476 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.12e-28 | 19 |
granulocyte monocyte progenitor cell | 2.35e-24 | 7 |
connective tissue cell | 5.74e-17 | 46 |
mesenchymal cell | 5.74e-17 | 46 |
hematopoietic cell | 1.84e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.84e-16 | 32 |
hematopoietic stem cell | 1.84e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.84e-16 | 32 |
myeloid cell | 4.93e-15 | 16 |
motile cell | 2.68e-14 | 54 |
bone marrow cell | 3.30e-10 | 3 |
mesenchymal stem cell of the bone marrow | 3.30e-10 | 3 |
somatic stem cell | 1.11e-09 | 91 |
multi fate stem cell | 1.11e-09 | 91 |
stem cell | 5.30e-09 | 97 |
monopoietic cell | 1.94e-07 | 4 |
myeloid leukocyte | 1.94e-07 | 4 |
phagocyte | 1.94e-07 | 4 |
monocyte | 1.94e-07 | 4 |
macrophage | 1.94e-07 | 4 |
tissue-resident macrophage | 1.94e-07 | 4 |
macrophage dendritic cell progenitor | 1.94e-07 | 4 |
monoblast | 1.94e-07 | 4 |
promonocyte | 1.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-26 | 16 |
bone element | 3.50e-19 | 22 |
skeletal element | 3.50e-19 | 22 |
skeletal system | 3.50e-19 | 22 |
connective tissue | 5.74e-17 | 46 |
musculoskeletal system | 2.09e-16 | 32 |
hemolymphoid system | 1.32e-10 | 48 |
immune system | 1.32e-10 | 48 |
hematopoietic system | 4.95e-09 | 45 |
blood island | 4.95e-09 | 45 |
lymph node | 1.05e-07 | 1 |
axillary lymph node | 1.05e-07 | 1 |
peripheral lymph node | 1.05e-07 | 1 |
shoulder | 1.05e-07 | 1 |