FFCP PHASE1:Hg19::chr6:90348440..90348485,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25229 | |||
|TSSclassifier=strong | |||
|UniProt=G3V136,E5RJK7,E5RG38,Q9NU23 | |||
|association_with_transcript=0bp_to_ENST00000412237,ENST00000520318,ENST00000520441,ENST00000523377,NM_020466,uc003png.2,uc003pnm.2_5end | |||
|cluster_id=chr6:90348440..90348485,- | |||
|description=CAGE_peak_1_at_LYRM2_5end | |||
|id=chr6:90348440..90348485,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.14e-08!239;DOID:162!2.09e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.14e-08,239;DOID:162,2.09e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.18e-09!41;UBERON:0001890!3.18e-09!41;UBERON:0006240!3.18e-09!41;UBERON:0000073!8.87e-09!94;UBERON:0001016!8.87e-09!94;UBERON:0003080!2.01e-08!42;UBERON:0005743!6.20e-08!86;UBERON:0001017!7.58e-08!82;UBERON:0002020!1.66e-07!34;UBERON:0003528!1.66e-07!34;UBERON:0001049!2.04e-07!57;UBERON:0005068!2.04e-07!57;UBERON:0006241!2.04e-07!57;UBERON:0007135!2.04e-07!57;UBERON:0001893!3.39e-07!34;UBERON:0002616!3.41e-07!59;UBERON:0002791!4.12e-07!33;UBERON:0001737!5.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.33e-07;9!UBERON:0001557;5.33e-07;9!UBERON:0002780;8.15e-07;41!UBERON:0001890;8.15e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.18e-09,41;UBERON:0001890,3.18e-09,41;UBERON:0003080,3.18e-09,41;UBERON:0006240,3.18e-09,41;UBERON:0001016,3.28e-09,89;UBERON:0001017,2.31e-08,81;UBERON:0001049,4.98e-08,56;UBERON:0005068,4.98e-08,56;UBERON:0006241,4.98e-08,56;UBERON:0007135,4.98e-08,56;UBERON:0000073,1.31e-07,53;UBERON:0002616,1.31e-07,53;UBERON:0003528,1.66e-07,34;UBERON:0002020,1.66e-07,34;UBERON:0001893,3.39e-07,34;UBERON:0000955,3.40e-07,68;UBERON:0006238,3.40e-07,68;UBERON:0001737,5.05e-07,9;UBERON:0002791,6.52e-07,32 | |||
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| |||
|short_description=p1@LYRM2 | |||
}} |
Latest revision as of 03:49, 20 September 2015
Short description: | p1@LYRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412237, ENST00000520318, ENST00000520441, ENST00000523377, NM_020466, uc003png.2, uc003pnm.2_5end |
EntrezGene: | LYRM2 |
HGNC: | 25229 |
UniProt: | G3V136E5RJK7E5RG38Q9NU23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.18e-09 | 41 |
forebrain | 3.18e-09 | 41 |
anterior neural tube | 3.18e-09 | 41 |
future forebrain | 3.18e-09 | 41 |
nervous system | 3.28e-09 | 89 |
central nervous system | 2.31e-08 | 81 |
neural tube | 4.98e-08 | 56 |
neural rod | 4.98e-08 | 56 |
future spinal cord | 4.98e-08 | 56 |
neural keel | 4.98e-08 | 56 |
regional part of nervous system | 1.31e-07 | 53 |
regional part of brain | 1.31e-07 | 53 |
brain grey matter | 1.66e-07 | 34 |
gray matter | 1.66e-07 | 34 |
telencephalon | 3.39e-07 | 34 |
brain | 3.40e-07 | 68 |
future brain | 3.40e-07 | 68 |
larynx | 5.05e-07 | 9 |
regional part of telencephalon | 6.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.14e-08 | 239 |
cancer | 2.09e-07 | 235 |