FFCP PHASE1:Hg19::chr6:85343999..85344011,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:85343999..85344011,+ | |||
|description=CAGE_peak_at_chr6:85343999..85344011,+ | |||
|id=chr6:85343999..85344011,+ | |||
|ontology_enrichment_celltype=CL:0000569!4.38e-15!4;CL:0000011!4.38e-15!4;CL:0002620!7.26e-09!23;CL:0002494!9.87e-08!16;CL:0000057!1.84e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002574;1.25e-13;1!CL:0002537;6.63e-11;5!CL:0000349;9.86e-11;19!CL:0002097;1.87e-07;2!CL:0002596;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,1.25e-13,1;CL:0002537,6.15e-11,5;CL:0000349,8.46e-11,19;CL:0002097,1.75e-07,2;CL:0002596,1.99e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;3.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.08e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.01e-16!14;UBERON:0000158!8.01e-16!14;UBERON:0003124!4.55e-13!7;UBERON:0001987!1.12e-08!4;UBERON:0004340!1.12e-08!4;UBERON:0000478!1.17e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.50e-14;1!UBERON:0005631;9.58e-12;10!UBERON:0000158;9.58e-12;10!UBERON:0000478;1.53e-08;24!UBERON:0000305;4.83e-08;7!UBERON:0005396;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.46e-14,14;UBERON:0000158,1.46e-14,14;UBERON:0007195,3.50e-14,1;UBERON:0000478,1.35e-08,24;UBERON:0003124,4.12e-08,7;UBERON:0000305,4.58e-08,7;UBERON:0005396,1.99e-07,2;UBERON:0004871,3.67e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8062049085004,0,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.538168907066586,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0,0.504867548488229,1.19664868234989,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82303003295338,0.871533458600294,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0.315404830067869,0.117141414992713,0,0,0,0,0,1.47702144595741,0,0,0,0,0,2.72814814301633,0,0.30239029332968,0,0,0,0.640695746278505,0,0,0,0,0,0.164254312027618,0,0.813472649219715,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0,0,1.27281299170375,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2250689159101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91400695839152,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,4.57680136793847,0.604923695052956,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0,1.90402606084398,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19349733269765,0,3.63069123666336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:85343999..85344011,+ | |||
}} |
Latest revision as of 03:34, 31 July 2015
Short description: | p@chr6:85343999..85344011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:85343999..85344011, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 1.25e-13 | 1 |
amnion mesenchymal stem cell | 6.15e-11 | 5 |
extraembryonic cell | 8.46e-11 | 19 |
cortical cell of adrenal gland | 1.75e-07 | 2 |
smooth muscle cell of the carotid artery | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.46e-14 | 14 |
membranous layer | 1.46e-14 | 14 |
stroma of bone marrow | 3.50e-14 | 1 |
extraembryonic structure | 1.35e-08 | 24 |
chorion | 4.12e-08 | 7 |
amnion | 4.58e-08 | 7 |
carotid artery segment | 1.99e-07 | 2 |
somatic layer of lateral plate mesoderm | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.08e-14 | 1 |