FFCP PHASE1:Hg19::chr6:7904848..7904912,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:7904848..7904912,+ | |||
|coexpression_cluster_id=C4627 | |||
|description=CAGE_peak_at_chr6:7904848..7904912,+ | |||
|id=chr6:7904848..7904912,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.02e-19!119;CL:0000055!8.66e-15!180;CL:0002139!6.47e-14!24;CL:0000220!3.48e-12!246;CL:0000183!5.84e-12!59;CL:0002321!9.07e-12!248;CL:0000680!2.52e-11!57;CL:0000056!2.52e-11!57;CL:0000355!2.52e-11!57;CL:0000187!4.42e-11!54;CL:0000071!4.59e-11!18;CL:0002546!4.59e-11!18;CL:0002078!6.81e-11!44;CL:0000393!9.65e-11!60;CL:0000211!9.65e-11!60;CL:0000548!1.48e-10!679;CL:0000004!1.48e-10!679;CL:0000255!1.48e-10!679;CL:0000359!2.46e-10!32;CL:0000115!3.28e-10!35;CL:0000012!5.04e-10!682;CL:0000192!7.19e-10!42;CL:0000514!7.19e-10!42;CL:0002371!7.46e-10!591;CL:0000144!2.57e-09!625;CL:0000213!2.84e-09!57;CL:0000215!2.84e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.36e-20;24!CL:0000359;3.37e-15;32!CL:0000071;3.97e-15;18!CL:0000115;1.27e-14;36!CL:0002078;3.75e-12;45!CL:0000192;5.15e-10;43!CL:1000413;1.53e-09;9!CL:0000187;2.77e-08;55!CL:0000213;3.50e-07;58!CL:0000215;3.50e-07;58!CL:0000393;5.22e-07;61!CL:0000211;5.22e-07;61!CL:0002544;5.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.57e-26,121;CL:0002139,1.75e-20,24;CL:0000115,9.87e-18,36;CL:0000359,1.43e-17,32;CL:0002078,1.52e-17,45;CL:0000071,8.40e-16,18;CL:0002546,8.40e-16,18;CL:0000187,4.67e-15,55;CL:0000192,8.45e-15,43;CL:0000514,8.45e-15,43;CL:0000680,1.68e-14,58;CL:0000056,1.68e-14,58;CL:0000355,1.68e-14,58;CL:0000393,4.93e-14,61;CL:0000211,4.93e-14,61;CL:0000213,4.95e-12,58;CL:0000215,4.95e-12,58;CL:0002321,2.51e-11,250;CL:1000413,8.71e-10,9;CL:0000048,2.20e-08,427;CL:0000723,4.10e-08,433;CL:0000034,2.21e-07,441;CL:0002544,3.65e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.97e-15;18!CL:0000514;5.15e-10;43!CL:0000355;9.16e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.42e-19!69;UBERON:0002049!1.26e-18!79;UBERON:0007798!1.26e-18!79;UBERON:0001981!1.31e-17!60;UBERON:0007500!1.31e-17!60;UBERON:0004537!1.31e-17!60;UBERON:0006965!1.31e-17!60;UBERON:0003914!2.27e-17!118;UBERON:0004872!7.22e-17!84;UBERON:0001637!1.72e-16!42;UBERON:0003509!1.72e-16!42;UBERON:0004572!1.72e-16!42;UBERON:0000490!8.89e-16!138;UBERON:0001009!1.41e-13!113;UBERON:0004535!1.66e-13!110;UBERON:0004573!2.02e-13!33;UBERON:0004571!2.02e-13!33;UBERON:0001986!4.59e-11!18;UBERON:0004638!4.59e-11!18;UBERON:0004852!4.59e-11!18;UBERON:0006914!4.46e-10!25;UBERON:0004290!4.64e-10!70;UBERON:0001134!4.96e-10!61;UBERON:0002036!4.96e-10!61;UBERON:0003082!4.96e-10!61;UBERON:0002385!5.88e-10!63;UBERON:0001015!5.88e-10!63;UBERON:0000383!5.88e-10!63;UBERON:0000487!2.76e-09!22;UBERON:0000914!6.81e-09!83;UBERON:0002329!6.81e-09!83;UBERON:0003077!6.81e-09!83;UBERON:0003059!6.81e-09!83;UBERON:0007282!6.81e-09!83;UBERON:0009618!6.81e-09!83;UBERON:0007285!6.81e-09!83;UBERON:0005256!1.09e-08!143;UBERON:0002100!2.15e-08!216;UBERON:0000486!2.71e-08!82;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0000926!3.38e-07!448;UBERON:0004120!3.38e-07!448;UBERON:0006603!3.38e-07!448;UBERON:0000947!4.18e-07!21;UBERON:0010191!4.18e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.83e-20;42!UBERON:0003509;2.83e-20;42!UBERON:0004572;2.83e-20;42!UBERON:0004573;9.15e-19;33!UBERON:0004571;9.15e-19;33!UBERON:0007500;1.96e-15;56!UBERON:0001981;1.96e-15;56!UBERON:0004537;1.96e-15;56!UBERON:0000055;3.49e-15;65!UBERON:0004638;3.97e-15;18!UBERON:0001986;3.97e-15;18!UBERON:0004852;3.97e-15;18!UBERON:0002049;1.56e-12;75!UBERON:0007798;1.56e-12;75!UBERON:0003914;3.70e-12;74!UBERON:0006914;1.01e-11;25!UBERON:0000487;3.06e-11;22!UBERON:0000947;3.89e-10;21!UBERON:0010191;3.89e-10;21!UBERON:0003915;1.53e-09;9!UBERON:0004700;1.53e-09;9!UBERON:0001917;1.53e-09;9!UBERON:0004535;7.99e-08;109!UBERON:0000490;2.31e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.38e-32,68;UBERON:0002049,3.47e-29,78;UBERON:0007798,3.47e-29,78;UBERON:0007500,7.60e-28,59;UBERON:0001981,7.60e-28,59;UBERON:0004537,7.60e-28,59;UBERON:0006965,7.60e-28,59;UBERON:0001637,3.45e-27,42;UBERON:0003509,3.45e-27,42;UBERON:0004572,3.45e-27,42;UBERON:0004872,5.82e-26,83;UBERON:0003914,8.78e-26,117;UBERON:0004535,6.84e-24,109;UBERON:0001009,1.25e-22,112;UBERON:0004573,2.16e-21,33;UBERON:0004571,2.16e-21,33;UBERON:0000490,1.78e-16,148;UBERON:0004638,8.40e-16,18;UBERON:0001986,8.40e-16,18;UBERON:0004852,8.40e-16,18;UBERON:0007503,2.48e-14,78;UBERON:0001134,1.11e-13,62;UBERON:0002036,1.11e-13,62;UBERON:0003082,1.11e-13,62;UBERON:0002385,1.19e-13,64;UBERON:0001015,1.19e-13,64;UBERON:0000383,1.19e-13,64;UBERON:0006914,2.25e-12,25;UBERON:0007524,3.10e-12,73;UBERON:0002329,6.05e-12,71;UBERON:0003059,6.05e-12,71;UBERON:0007282,6.05e-12,71;UBERON:0004290,6.05e-12,71;UBERON:0009618,6.05e-12,71;UBERON:0000487,9.19e-12,22;UBERON:0003077,1.33e-11,72;UBERON:0007285,1.33e-11,72;UBERON:0000947,5.35e-11,21;UBERON:0010191,5.35e-11,21;UBERON:0005256,6.43e-11,122;UBERON:0004111,2.41e-10,240;UBERON:0000926,2.61e-10,315;UBERON:0004120,2.61e-10,315;UBERON:0006603,2.61e-10,315;UBERON:0000025,5.36e-10,192;UBERON:0000486,6.83e-10,83;UBERON:0003915,8.71e-10,9;UBERON:0004700,8.71e-10,9;UBERON:0001917,8.71e-10,9;UBERON:0003081,6.33e-09,203;UBERON:0002100,6.65e-09,199;UBERON:0003104,1.06e-08,160;UBERON:0009142,1.06e-08,160;UBERON:0000483,1.69e-07,306;UBERON:0000119,3.41e-07,309 | |||
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| |||
|short_description=p@chr6:7904848..7904912,+ | |||
}} |
Latest revision as of 03:20, 31 July 2015
Short description: | p@chr6:7904848..7904912, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7904848..7904912, + |
Coexpression cluster: | C4627_lymphangiectasia_Endothelial_Smooth_Renal_hepatic_Lymphatic_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.57e-26 | 121 |
endothelial cell of vascular tree | 1.75e-20 | 24 |
endothelial cell | 9.87e-18 | 36 |
vascular associated smooth muscle cell | 1.43e-17 | 32 |
meso-epithelial cell | 1.52e-17 | 45 |
blood vessel endothelial cell | 8.40e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.40e-16 | 18 |
muscle cell | 4.67e-15 | 55 |
smooth muscle cell | 8.45e-15 | 43 |
smooth muscle myoblast | 8.45e-15 | 43 |
muscle precursor cell | 1.68e-14 | 58 |
myoblast | 1.68e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.68e-14 | 58 |
electrically responsive cell | 4.93e-14 | 61 |
electrically active cell | 4.93e-14 | 61 |
lining cell | 4.95e-12 | 58 |
barrier cell | 4.95e-12 | 58 |
embryonic cell | 2.51e-11 | 250 |
endothelial cell of artery | 8.71e-10 | 9 |
multi fate stem cell | 2.20e-08 | 427 |
somatic stem cell | 4.10e-08 | 433 |
stem cell | 2.21e-07 | 441 |
aortic endothelial cell | 3.65e-07 | 6 |