FFCP PHASE1:Hg19::chr6:56485169..56485189,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:56485169..56485189,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56485169..56485189,- | |||
|id=chr6:56485169..56485189,- | |||
|ontology_enrichment_celltype=CL:0000066!3.66e-15!254;CL:0002076!9.39e-11!43;CL:0000223!4.60e-10!59;CL:0000076!9.88e-09!62;CL:0002321!3.32e-07!248;CL:0000220!4.25e-07!246;CL:0002251!5.46e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.48e-21;3!CL:0002076;5.87e-21;42!CL:0002251;1.94e-15;20!CL:0000622;7.29e-13;5!CL:0002159;2.58e-11;14!CL:0000154;8.43e-11;6!CL:0000240;1.99e-10;6!CL:0000311;1.99e-10;6!CL:0000079;1.99e-10;6!CL:0000237;1.99e-10;6!CL:0002231;9.09e-10;3!CL:0002166;1.63e-09;3!CL:0002368;2.66e-08;13!CL:0002336;4.66e-08;1!CL:0002261;4.66e-08;1!CL:0002170;4.66e-08;1!CL:0002327;1.21e-07;4!CL:0000222;1.26e-07;1!CL:0000244;1.37e-07;4!CL:0000731;1.37e-07;4!CL:0000150;2.41e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.52e-24,42;CL:0000223,1.94e-22,58;CL:0002623,4.35e-21,3;CL:0002251,2.01e-15,20;CL:0000622,7.16e-13,5;CL:0000066,1.41e-12,253;CL:0002159,2.96e-11,14;CL:0000154,8.30e-11,6;CL:0000240,2.42e-10,6;CL:0000311,2.42e-10,6;CL:0000079,2.42e-10,6;CL:0000237,2.42e-10,6;CL:0000036,2.42e-10,6;CL:0000357,2.42e-10,6;CL:0000114,2.42e-10,6;CL:0002231,7.15e-10,3;CL:0002166,1.71e-09,3;CL:0002321,4.47e-09,250;CL:0002368,2.46e-08,13;CL:0002336,4.07e-08,1;CL:0002261,4.07e-08,1;CL:0002170,4.07e-08,1;CL:0002327,1.23e-07,4;CL:0000244,1.49e-07,4;CL:0000731,1.49e-07,4;CL:0000150,2.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;3.62e-12;58!CL:0000357;1.99e-10;6!CL:0000114;1.99e-10;6 | |||
|ontology_enrichment_disease=DOID:305!3.28e-10!106;DOID:0050687!9.40e-10!143;DOID:1749!1.72e-09!14;DOID:162!7.85e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.81e-11!169;UBERON:0000925!4.81e-11!169;UBERON:0006595!4.81e-11!169;UBERON:0000161!1.96e-09!35;UBERON:0001007!6.26e-09!155;UBERON:0001555!6.26e-09!155;UBERON:0007026!6.26e-09!155;UBERON:0001004!4.06e-08!72;UBERON:0000166!7.01e-08!21;UBERON:0000033!2.28e-07!123;UBERON:0000153!6.70e-07!129;UBERON:0007811!6.70e-07!129;UBERON:0000165!7.30e-07!28;UBERON:0000930!7.30e-07!28;UBERON:0004121!7.86e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;4.59e-12;19!UBERON:0000166;4.59e-12;19!UBERON:0001044;8.43e-11;6!UBERON:0003293;8.43e-11;6!UBERON:0003294;8.43e-11;6!UBERON:0010047;8.43e-11;6!UBERON:0003408;8.43e-11;6!UBERON:0000167;8.43e-11;6!UBERON:0000165;8.82e-11;28!UBERON:0003729;3.28e-08;13!UBERON:0001911;1.21e-07;4!UBERON:0003343;1.75e-07;4!UBERON:0004785;1.75e-07;4!UBERON:0001708;2.42e-07;4!UBERON:0008895;2.42e-07;4!UBERON:0002365;2.78e-07;31!UBERON:0002330;2.78e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.86e-12,99;UBERON:0001044,8.30e-11,6;UBERON:0003293,8.30e-11,6;UBERON:0003294,8.30e-11,6;UBERON:0010047,8.30e-11,6;UBERON:0000167,8.30e-11,6;UBERON:0000161,1.27e-10,36;UBERON:0000165,2.28e-10,29;UBERON:0000930,2.28e-10,29;UBERON:0000166,2.56e-10,22;UBERON:0000033,5.86e-10,56;UBERON:0000153,7.89e-09,62;UBERON:0007811,7.89e-09,62;UBERON:0003729,3.41e-08,13;UBERON:0001911,1.23e-07,4;UBERON:0005333,1.23e-07,4;UBERON:0008425,1.23e-07,4;UBERON:0005311,1.23e-07,4;UBERON:0001444,1.83e-07,49;UBERON:0003343,2.00e-07,4;UBERON:0004785,2.00e-07,4;UBERON:0001708,2.50e-07,4;UBERON:0008895,2.50e-07,4;UBERON:0004119,3.03e-07,160;UBERON:0000925,3.03e-07,160;UBERON:0006595,3.03e-07,160;UBERON:0002365,3.21e-07,31;UBERON:0002330,3.21e-07,31;UBERON:0001004,3.40e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821246550437305,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0.0920498986422993,0,0,0,0,0.193260853163297,1.36373060295417,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0.337169380156203,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,0,0,1.09750285408626,0,5.5290934826397,5.92566049014589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.35174979478403,1.27597587518148,3.40322386270824,6.1033127087932,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.60405176242628,10.9576376833717,0,0.546273504020151,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0,0,5.61968712227326,2.30628080838127,1.53135254993501,8.29493803015509,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.288666338176536,0,0,0.188287601553558,0,3.36942951335251,0,5.05391480455311,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.921482106297696,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0.933118762985422,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.910347586283997,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,2.23077990845765,0.153900517007594,0.113942055847001,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0.293977192243133,0.261177619741208,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.14405479798815,0,0.471388069233591,0.271808412147228,0.523014231561666,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.295282444544246,0.0846733320657845,0,0.681017030557878,0.160753148465019,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,0.221858103073705,0,1.10678907948985,0.37494122388632,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0.465788870628778,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0.489473409012935,0.179088841081487,0,0,0.530067437837643,0.771656153083659,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0.0691572524642179,0.645902582527404,0,1.17777262201231,0.353909170043221,6.9702867438238,0.462102664601353,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,0.535701835878287,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0.23248285073625,0,0,5.80205259656503,10.072390148543,6.22133695632683,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0.199882311849858,1.42843150884526,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,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| |||
|short_description=p@chr6:56485169..56485189,- | |||
}} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485169..56485189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485169..56485189, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.52e-24 | 42 |
endodermal cell | 1.94e-22 | 58 |
acinar cell of salivary gland | 4.35e-21 | 3 |
epithelial cell of alimentary canal | 2.01e-15 | 20 |
acinar cell | 7.16e-13 | 5 |
epithelial cell | 1.41e-12 | 253 |
general ecto-epithelial cell | 2.96e-11 | 14 |
protein secreting cell | 8.30e-11 | 6 |
stratified squamous epithelial cell | 2.42e-10 | 6 |
keratin accumulating cell | 2.42e-10 | 6 |
stratified epithelial cell | 2.42e-10 | 6 |
keratinizing barrier epithelial cell | 2.42e-10 | 6 |
epithelial fate stem cell | 2.42e-10 | 6 |
stratified epithelial stem cell | 2.42e-10 | 6 |
surface ectodermal cell | 2.42e-10 | 6 |
epithelial cell of prostate | 7.15e-10 | 3 |
epithelial cell of Malassez | 1.71e-09 | 3 |
embryonic cell | 4.47e-09 | 250 |
respiratory epithelial cell | 2.46e-08 | 13 |
buccal mucosa cell | 4.07e-08 | 1 |
endothelial cell of viscerocranial mucosa | 4.07e-08 | 1 |
keratinized cell of the oral mucosa | 4.07e-08 | 1 |
mammary gland epithelial cell | 1.23e-07 | 4 |
transitional epithelial cell | 1.49e-07 | 4 |
urothelial cell | 1.49e-07 | 4 |
glandular epithelial cell | 2.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.86e-12 | 99 |
saliva-secreting gland | 8.30e-11 | 6 |
gland of oral region | 8.30e-11 | 6 |
gland of foregut | 8.30e-11 | 6 |
oral gland | 8.30e-11 | 6 |
oral cavity | 8.30e-11 | 6 |
orifice | 1.27e-10 | 36 |
mouth | 2.28e-10 | 29 |
stomodeum | 2.28e-10 | 29 |
oral opening | 2.56e-10 | 22 |
head | 5.86e-10 | 56 |
anterior region of body | 7.89e-09 | 62 |
craniocervical region | 7.89e-09 | 62 |
mouth mucosa | 3.41e-08 | 13 |
mammary gland | 1.23e-07 | 4 |
mammary bud | 1.23e-07 | 4 |
mammary ridge | 1.23e-07 | 4 |
mammary placode | 1.23e-07 | 4 |
subdivision of head | 1.83e-07 | 49 |
mucosa of oral region | 2.00e-07 | 4 |
respiratory system mucosa | 2.00e-07 | 4 |
jaw skeleton | 2.50e-07 | 4 |
splanchnocranium | 2.50e-07 | 4 |
endoderm-derived structure | 3.03e-07 | 160 |
endoderm | 3.03e-07 | 160 |
presumptive endoderm | 3.03e-07 | 160 |
exocrine gland | 3.21e-07 | 31 |
exocrine system | 3.21e-07 | 31 |
respiratory system | 3.40e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.54e-07 | 14 |