FFCP PHASE1:Hg19::chr6:45618665..45618676,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:45618665..45618676,+ | |||
|description=CAGE_peak_at_chr6:45618665..45618676,+ | |||
|id=chr6:45618665..45618676,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.16e-11!180;CL:0000708!2.14e-08!3;CL:0000057!5.10e-08!75;CL:0000064!1.13e-07!3;CL:0005012!1.13e-07!3;CL:0000067!1.13e-07!3;CL:0002304!1.13e-07!3;CL:0000144!3.64e-07!625;CL:0000548!7.69e-07!679;CL:0000004!7.69e-07!679;CL:0000255!7.69e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000708;1.46e-50;3!CL:0000327;1.10e-10;15!CL:0002554;9.87e-10;2!CL:0002536;1.51e-09;2!CL:0000349;2.11e-08;19!CL:0000064;8.86e-07;3!CL:0000067;8.86e-07;3!CL:0005012;8.86e-07;3!CL:0000322;8.86e-07;3!CL:0002304;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.59e-50,3;CL:0000327,1.11e-10,15;CL:0002554,9.46e-10,2;CL:0002536,1.44e-09,2;CL:0000349,2.14e-08,19;CL:0000322,7.28e-07,3;CL:0000064,8.15e-07,3;CL:0000067,8.15e-07,3;CL:0005012,8.15e-07,3;CL:0002304,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;1.51e-09;2!DOID:3910;1.51e-09;2!DOID:1907;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.12e-09,2;DOID:4231,1.71e-09,2;DOID:1907,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!2.52e-09!4;UBERON:0003210!2.14e-08!3;UBERON:0001778!1.13e-07!3;UBERON:0001775!1.13e-07!3;UBERON:0002200!9.76e-07!11;UBERON:0006876!9.76e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.46e-50;3!UBERON:0000305;2.35e-10;7!UBERON:0004903;1.51e-09;2!UBERON:0002173;1.51e-09;2!UBERON:0002186;1.51e-09;2!UBERON:0005631;1.62e-07;10!UBERON:0000158;1.62e-07;10!UBERON:0004821;8.86e-07;3!UBERON:0007499;8.86e-07;3!UBERON:0003215;8.86e-07;3!UBERON:0010368;8.86e-07;3!UBERON:0009911;8.86e-07;3!UBERON:0002299;8.86e-07;3!UBERON:0001778;8.86e-07;3!UBERON:0001775;8.86e-07;3!UBERON:0006524;8.86e-07;3!UBERON:0008874;8.86e-07;3!UBERON:0002169;8.86e-07;3!UBERON:0004894;8.86e-07;3!UBERON:0000478;9.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.59e-50,3;UBERON:0000305,2.70e-10,7;UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0004871,4.02e-09,8;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3;UBERON:0001778,8.15e-07,3;UBERON:0001775,8.15e-07,3;UBERON:0000478,9.31e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,1.31883489114227,0,0,0,0,0,0,0.61560529038394,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,1.33037638477538,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0.647491777472526,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0,0,2.15585442544872,0,0.125118519871964,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,3.02753927732474,1.30788020649984,3.2268845761218,0,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0.601519410909855,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.340906509664404,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0.405820753925408,0,0,0.717056761020258,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:45618665..45618676,+ | |||
}} |
Latest revision as of 02:03, 31 July 2015
Short description: | p@chr6:45618665..45618676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:45618665..45618676, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.59e-50 | 3 |
extracellular matrix secreting cell | 1.11e-10 | 15 |
fibroblast of lymphatic vessel | 9.46e-10 | 2 |
amniotic epithelial cell | 1.44e-09 | 2 |
extraembryonic cell | 2.14e-08 | 19 |
pneumocyte | 7.28e-07 | 3 |
ciliated cell | 8.15e-07 | 3 |
ciliated epithelial cell | 8.15e-07 | 3 |
multi-ciliated epithelial cell | 8.15e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.59e-50 | 3 |
amnion | 2.70e-10 | 7 |
bronchoalveolar duct junction | 1.12e-09 | 2 |
alveolar duct | 1.12e-09 | 2 |
bronchiole | 1.12e-09 | 2 |
somatic layer of lateral plate mesoderm | 4.02e-09 | 8 |
pulmonary alveolus epithelium | 7.28e-07 | 3 |
alveolus | 7.28e-07 | 3 |
pulmonary lobule | 7.28e-07 | 3 |
lobule | 7.28e-07 | 3 |
alveolus of lung | 7.28e-07 | 3 |
alveolar system | 7.28e-07 | 3 |
pulmonary acinus | 7.28e-07 | 3 |
alveolar sac | 7.28e-07 | 3 |
alveolar wall | 7.28e-07 | 3 |
ciliary epithelium | 8.15e-07 | 3 |
ciliary body | 8.15e-07 | 3 |
extraembryonic structure | 9.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.12e-09 | 2 |
histiocytoma | 1.71e-09 | 2 |
malignant fibroxanthoma | 1.71e-09 | 2 |