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FFCP PHASE1:Mm9::chr1:82583484..82583513,+: Difference between revisions

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{{FFCP|EntrezGene=12828|HGNC=|MCL_coexpression_id=305|UniProt=Q9QZS0|association_with_transcript=0bp_to_ENSMUST00000141994,NM_007734,uc007bru.1,uc007brv.1_5end|description=CAGE_peak_3_at_Col4a3_5end|id=chr1:82583484..82583513,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.09e-11!17;UBERON:0005181!2.09e-11!17;UBERON:0002224!2.09e-11!17;UBERON:0000915!2.09e-11!17;UBERON:0008947!2.09e-11!17;UBERON:0003258!2.09e-11!17;UBERON:0000464!1.37e-10!57;UBERON:0009569!1.20e-09!66;UBERON:0002048!1.45e-09!14;UBERON:0000117!1.45e-09!14;UBERON:0000171!1.45e-09!14;UBERON:0000170!1.45e-09!14;UBERON:0005597!1.45e-09!14;UBERON:0000118!1.45e-09!14;UBERON:0003103!1.26e-08!43;UBERON:0005153!1.36e-07!17;UBERON:0000466!2.03e-07!79;UBERON:0005156!2.64e-07!26;UBERON:0000990!2.64e-07!26;UBERON:0005177!3.98e-07!85;UBERON:0001008!6.46e-07!17;UBERON:0003133!8.95e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.92e-16,17;UBERON:0005181,1.92e-16,17;UBERON:0002224,1.92e-16,17;UBERON:0000915,1.92e-16,17;UBERON:0008947,1.92e-16,17;UBERON:0003258,1.92e-16,17;UBERON:0002048,1.52e-13,14;UBERON:0000117,1.52e-13,14;UBERON:0000171,1.52e-13,14;UBERON:0000170,1.52e-13,14;UBERON:0005597,1.52e-13,14;UBERON:0000118,1.52e-13,14;UBERON:0009569,3.58e-12,66;UBERON:0005153,2.20e-10,17;UBERON:0005177,5.83e-10,79;UBERON:0002100,1.50e-08,90;UBERON:0003135,2.41e-08,15;UBERON:0005157,3.34e-08,20;UBERON:0002113,4.44e-08,14;UBERON:0003918,4.44e-08,14;UBERON:0011143,4.44e-08,14;UBERON:0005095,4.44e-08,14;UBERON:0007687,4.44e-08,14;UBERON:0000473,8.75e-08,14;UBERON:0005156,8.82e-08,26;UBERON:0000990,8.82e-08,26;UBERON:0003133,1.01e-07,24;UBERON:0003101,1.29e-07,16;UBERON:0000079,1.29e-07,16;UBERON:0003103,2.20e-07,43;UBERON:0001048,2.45e-07,134;UBERON:0004176,4.95e-07,17;UBERON:0009196,4.95e-07,17;UBERON:0009117,4.95e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12311689087702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,3.05235218932625,0.878744730937887,3.4997381833371,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,2.31891590961342,0,0,0,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,4.97929394325792,4.30711771307668,3.0331466700887,3.31133251185274,0,1.1875371125186,0,0.608930956624282,2.07553947530453,0.753613202763113,1.99900802130698,1.88499886994513,2.71914464507811,1.87979163995885,0,0,0.441683036920787,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0.41557608911912,0.324482526135515,3.97173519016234,3.23458123586242,1.51633655060205,1.68353484709179,0.650602214813519,0.689706313300419,0.720248519221397,1.80845781402858,2.24520447199382,2.562274405697,2.24884138943349,8.01980449290949,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.787056926989615,0.462801338662135,1.16266972375204,1.07309360559848,0.700592054203017,1.48103864922132,1.64167464079095,2.99954595319666,4.09359964790931,2.41505126820156,3.35516046900929,1.47202963994889,0.823236899034275,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.974820435595601,0,0.216138049874694,0.796565093017469,0.379335801906163,0.456994050438915,1.1270773567308,1.01825663922657,4.65485969202302,8.34616256694791,21.4371860851232,29.5220295959204,26.375786277351,26.2835959153435,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0.50925170356284,1.43848068725405,0,0,0,2.23284568601102,0.312037673114561,0.252578877947112,1.07638448113147,0,21.0618636789929,0.189491411770485,1.14075483509418,1.52770577197669,3.28566347603903,11.0554129911598,14.9967493758189,25.5625078693716,28.059055650902,26.1328333785554,27.5856749777453,31.9533463695689,27.1115421529456,33.7032306494922,0,0,0,0,0.160550589987792,0.586058432961016,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.642642632843614,1.70328102249922,0.534196811001766,0.325773918707152,1.64970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,2.21225730555071,2.10837217149998,0,4.42571487479924,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0.21183207086382,0.661585194164886,0.49465875882444,0.161464426695906,0.361877549568935,1.19372344003136,1.47726809770555,0.291480836629851,0.370850604021019,0,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.743881101528023,2.09404753587224,0.648074866458964,1.24267862617385,0,0.747582730219894,1.15820943319968,1.55560950675238,1.80823752868824,3.04121025883401,4.92900402312167,9.11430693907651,8.07416952077974,5.31485065817213,2.59227005632079,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.579568782096571,2.81523713176773,1.83151624267265,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,1.64828045791115,0,0.505394423527595,1.52087579934144,1.13175804831646,0.749132059759059,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.06485483695602,0.476872379894642,0.436039249896986,0.752875043322645,0.761531471025089,0.914639864363863,1.05227884575137,0.271608227691724,0.561142271657738,1.06771516311757,1.28055827088233,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,2.57845264857958,0,0.220591419119515,0.463735671240843|short_description=p3@Col4a3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12828
|HGNC=
|MCL_coexpression_id=305
|TSSclassifier=NA
|UniProt=Q9QZS0
|association_with_transcript=0bp_to_ENSMUST00000141994,NM_007734,uc007bru.1,uc007brv.1_5end
|cluster_id=chr1:82583484..82583513,+
|description=CAGE_peak_3_at_Col4a3_5end
|id=chr1:82583484..82583513,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!2.09e-11!17;UBERON:0005181!2.09e-11!17;UBERON:0002224!2.09e-11!17;UBERON:0000915!2.09e-11!17;UBERON:0008947!2.09e-11!17;UBERON:0003258!2.09e-11!17;UBERON:0000464!1.37e-10!57;UBERON:0009569!1.20e-09!66;UBERON:0002048!1.45e-09!14;UBERON:0000117!1.45e-09!14;UBERON:0000171!1.45e-09!14;UBERON:0000170!1.45e-09!14;UBERON:0005597!1.45e-09!14;UBERON:0000118!1.45e-09!14;UBERON:0003103!1.26e-08!43;UBERON:0005153!1.36e-07!17;UBERON:0000466!2.03e-07!79;UBERON:0005156!2.64e-07!26;UBERON:0000990!2.64e-07!26;UBERON:0005177!3.98e-07!85;UBERON:0001008!6.46e-07!17;UBERON:0003133!8.95e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.92e-16,17;UBERON:0005181,1.92e-16,17;UBERON:0002224,1.92e-16,17;UBERON:0000915,1.92e-16,17;UBERON:0008947,1.92e-16,17;UBERON:0003258,1.92e-16,17;UBERON:0002048,1.52e-13,14;UBERON:0000117,1.52e-13,14;UBERON:0000171,1.52e-13,14;UBERON:0000170,1.52e-13,14;UBERON:0005597,1.52e-13,14;UBERON:0000118,1.52e-13,14;UBERON:0009569,3.58e-12,66;UBERON:0005153,2.20e-10,17;UBERON:0005177,5.83e-10,79;UBERON:0002100,1.50e-08,90;UBERON:0003135,2.41e-08,15;UBERON:0005157,3.34e-08,20;UBERON:0002113,4.44e-08,14;UBERON:0003918,4.44e-08,14;UBERON:0011143,4.44e-08,14;UBERON:0005095,4.44e-08,14;UBERON:0007687,4.44e-08,14;UBERON:0000473,8.75e-08,14;UBERON:0005156,8.82e-08,26;UBERON:0000990,8.82e-08,26;UBERON:0003133,1.01e-07,24;UBERON:0003101,1.29e-07,16;UBERON:0000079,1.29e-07,16;UBERON:0003103,2.20e-07,43;UBERON:0001048,2.45e-07,134;UBERON:0004176,4.95e-07,17;UBERON:0009196,4.95e-07,17;UBERON:0009117,4.95e-07,17
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12311689087702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,3.05235218932625,0.878744730937887,3.4997381833371,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,2.31891590961342,0,0,0,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,4.97929394325792,4.30711771307668,3.0331466700887,3.31133251185274,0,1.1875371125186,0,0.608930956624282,2.07553947530453,0.753613202763113,1.99900802130698,1.88499886994513,2.71914464507811,1.87979163995885,0,0,0.441683036920787,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0.41557608911912,0.324482526135515,3.97173519016234,3.23458123586242,1.51633655060205,1.68353484709179,0.650602214813519,0.689706313300419,0.720248519221397,1.80845781402858,2.24520447199382,2.562274405697,2.24884138943349,8.01980449290949,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.787056926989615,0.462801338662135,1.16266972375204,1.07309360559848,0.700592054203017,1.48103864922132,1.64167464079095,2.99954595319666,4.09359964790931,2.41505126820156,3.35516046900929,1.47202963994889,0.823236899034275,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.974820435595601,0,0.216138049874694,0.796565093017469,0.379335801906163,0.456994050438915,1.1270773567308,1.01825663922657,4.65485969202302,8.34616256694791,21.4371860851232,29.5220295959204,26.375786277351,26.2835959153435,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0.50925170356284,1.43848068725405,0,0,0,2.23284568601102,0.312037673114561,0.252578877947112,1.07638448113147,0,21.0618636789929,0.189491411770485,1.14075483509418,1.52770577197669,3.28566347603903,11.0554129911598,14.9967493758189,25.5625078693716,28.059055650902,26.1328333785554,27.5856749777453,31.9533463695689,27.1115421529456,33.7032306494922,0,0,0,0,0.160550589987792,0.586058432961016,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.642642632843614,1.70328102249922,0.534196811001766,0.325773918707152,1.64970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,2.21225730555071,2.10837217149998,0,4.42571487479924,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0.21183207086382,0.661585194164886,0.49465875882444,0.161464426695906,0.361877549568935,1.19372344003136,1.47726809770555,0.291480836629851,0.370850604021019,0,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.743881101528023,2.09404753587224,0.648074866458964,1.24267862617385,0,0.747582730219894,1.15820943319968,1.55560950675238,1.80823752868824,3.04121025883401,4.92900402312167,9.11430693907651,8.07416952077974,5.31485065817213,2.59227005632079,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.579568782096571,2.81523713176773,1.83151624267265,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,1.64828045791115,0,0.505394423527595,1.52087579934144,1.13175804831646,0.749132059759059,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.06485483695602,0.476872379894642,0.436039249896986,0.752875043322645,0.761531471025089,0.914639864363863,1.05227884575137,0.271608227691724,0.561142271657738,1.06771516311757,1.28055827088233,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,2.57845264857958,0,0.220591419119515,0.463735671240843
|short_description=p3@Col4a3
}}

Latest revision as of 16:11, 1 October 2015

Short description:p3@Col4a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Col4a3_5end
Coexpression cluster:MCL_coexpression_mm9:305
Association with transcript: 0bp_to_ENSMUST00000141994, NM_007734, uc007bru.1, uc007brv.1_5end
EntrezGene:Col4a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Col4a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G78.35
kidney, neonate N10.CNhs11206.758-6D521.44
kidney, neonate N20.CNhs11113.832-19I129.52
kidney, neonate N25.CNhs11122.1353-25F326.38
kidney, neonate N30.CNhs11203.1385-42H126.28
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B121.06
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E528.06
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E627.59
lung, neonate N20.CNhs11109.822-18A431.95
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H233.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I49.11
testis, neonate N10.CNhs11204.763-44D98.07
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.92e-1617
thoracic segment organ1.92e-1617
thoracic cavity1.92e-1617
thoracic segment of trunk1.92e-1617
respiratory primordium1.92e-1617
endoderm of foregut1.92e-1617
lung1.52e-1314
respiratory tube1.52e-1314
respiration organ1.52e-1314
pair of lungs1.52e-1314
lung primordium1.52e-1314
lung bud1.52e-1314
subdivision of trunk3.58e-1266
epithelial bud2.20e-1017
trunk region element5.83e-1079
trunk1.50e-0890
male reproductive organ2.41e-0815
epithelial fold3.34e-0820
kidney4.44e-0814
kidney mesenchyme4.44e-0814
upper urinary tract4.44e-0814
kidney rudiment4.44e-0814
kidney field4.44e-0814
testis8.75e-0814
reproductive structure8.82e-0826
reproductive system8.82e-0826
reproductive organ1.01e-0724
male organism1.29e-0716
male reproductive system1.29e-0716
compound organ2.20e-0743
primordium2.45e-07134
external genitalia4.95e-0717
indifferent external genitalia4.95e-0717
indifferent gonad4.95e-0717
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