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FFCP PHASE1:Mm9::chr1:82583335..82583354,-: Difference between revisions

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{{FFCP|EntrezGene=12829|HGNC=|MCL_coexpression_id=305|UniProt=|association_with_transcript=12bp_to_ENSMUST00000135271_5end|description=CAGE_peak_2_at_Col4a4_5end|id=chr1:82583335..82583354,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!8.65e-13!57;UBERON:0009569!5.70e-12!66;UBERON:0005156!5.89e-12!26;UBERON:0000990!5.89e-12!26;UBERON:0003133!4.58e-11!24;UBERON:0003101!5.61e-10!16;UBERON:0000079!5.61e-10!16;UBERON:0000991!9.02e-10!18;UBERON:0005564!9.02e-10!18;UBERON:0005178!9.50e-10!17;UBERON:0005181!9.50e-10!17;UBERON:0002224!9.50e-10!17;UBERON:0000915!9.50e-10!17;UBERON:0008947!9.50e-10!17;UBERON:0003258!9.50e-10!17;UBERON:0000466!9.88e-10!79;UBERON:0004176!1.16e-09!17;UBERON:0009196!1.16e-09!17;UBERON:0009117!1.16e-09!17;UBERON:0003135!1.30e-09!15;UBERON:0000473!4.99e-09!14;UBERON:0000926!7.14e-09!193;UBERON:0004120!7.14e-09!193;UBERON:0006603!7.14e-09!193;UBERON:0002048!1.27e-08!14;UBERON:0000117!1.27e-08!14;UBERON:0000171!1.27e-08!14;UBERON:0000170!1.27e-08!14;UBERON:0005597!1.27e-08!14;UBERON:0000118!1.27e-08!14;UBERON:0001008!1.74e-08!17;UBERON:0005157!2.35e-08!27;UBERON:0006554!2.43e-08!16;UBERON:0005177!2.73e-08!85;UBERON:0002100!1.27e-07!98;UBERON:0002113!1.92e-07!14;UBERON:0003918!1.92e-07!14;UBERON:0005095!1.92e-07!14;UBERON:0007687!1.92e-07!14;UBERON:0005153!2.46e-07!17;UBERON:0003103!2.99e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.89e-17,14;UBERON:0000117,3.89e-17,14;UBERON:0000171,3.89e-17,14;UBERON:0000170,3.89e-17,14;UBERON:0005597,3.89e-17,14;UBERON:0000118,3.89e-17,14;UBERON:0005178,5.52e-16,17;UBERON:0005181,5.52e-16,17;UBERON:0002224,5.52e-16,17;UBERON:0000915,5.52e-16,17;UBERON:0008947,5.52e-16,17;UBERON:0003258,5.52e-16,17;UBERON:0003135,2.04e-14,15;UBERON:0009569,5.15e-14,66;UBERON:0005153,1.19e-13,17;UBERON:0003101,2.30e-13,16;UBERON:0000079,2.30e-13,16;UBERON:0000473,4.04e-13,14;UBERON:0003133,2.46e-11,24;UBERON:0005157,3.22e-11,20;UBERON:0002113,6.59e-11,14;UBERON:0003918,6.59e-11,14;UBERON:0011143,6.59e-11,14;UBERON:0005095,6.59e-11,14;UBERON:0007687,6.59e-11,14;UBERON:0005177,1.09e-10,79;UBERON:0004176,1.98e-10,17;UBERON:0009196,1.98e-10,17;UBERON:0009117,1.98e-10,17;UBERON:0005156,3.07e-10,26;UBERON:0000990,3.07e-10,26;UBERON:0000991,9.84e-10,18;UBERON:0005564,9.84e-10,18;UBERON:0002100,1.63e-09,90;UBERON:0006554,4.42e-08,18;UBERON:0001008,1.46e-07,19;UBERON:0001048,6.56e-07,134|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.74420125104357,0.439372365468944,3.11087838518853,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,1.7127581957859,0,0.593768556259299,0.520455980298408,0.304465478312141,0,0.301445281105245,2.11659672844269,1.63366568728578,0.494389935468748,1.01219549843938,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,1.83310854930569,1.36847667671102,1.0108910337347,0.420883711772948,0,0.229902104433473,0,0.60281927134286,0.884474488967262,0.768682321709099,0.843315521037559,2.84573707812917,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.536546802799238,0.233530684734339,0.822799249567402,0.656669856316381,2.10778904819225,2.48539978623065,1.97595103761946,0.671032093801859,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.610953983535943,2.71533482034676,2.94570443539338,8.47369597465048,14.9086249459398,13.0308944108341,9.25478729413504,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0.757736633841335,0,0.482443521363367,6.09685527549795,0,0.488894929326078,0,1.40814148973101,1.50755631697634,4.99891645860629,5.46374214001837,8.35466263762812,5.97954662051692,7.17546458958692,9.17634562408133,6.73471429276993,8.10034728056465,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0.656563598980245,0,0,0,0.82554747185289,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0.436725127492355,0,0.247960367176008,0,0,0,0,0.598066184175915,0.330916980914195,1.75006069509643,1.80823752868824,2.87225413334323,4.92900402312167,5.9894017028217,8.91304427618542,5.07326653734613,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,1.12609485270709,1.46521299413812,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.309873682371932,0,0,0,0.214871054048298,0,0,0|short_description=p2@Col4a4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12829
|HGNC=
|MCL_coexpression_id=305
|TSSclassifier=NA
|UniProt=
|association_with_transcript=12bp_to_ENSMUST00000135271_5end
|cluster_id=chr1:82583335..82583354,-
|description=CAGE_peak_2_at_Col4a4_5end
|id=chr1:82583335..82583354,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!8.65e-13!57;UBERON:0009569!5.70e-12!66;UBERON:0005156!5.89e-12!26;UBERON:0000990!5.89e-12!26;UBERON:0003133!4.58e-11!24;UBERON:0003101!5.61e-10!16;UBERON:0000079!5.61e-10!16;UBERON:0000991!9.02e-10!18;UBERON:0005564!9.02e-10!18;UBERON:0005178!9.50e-10!17;UBERON:0005181!9.50e-10!17;UBERON:0002224!9.50e-10!17;UBERON:0000915!9.50e-10!17;UBERON:0008947!9.50e-10!17;UBERON:0003258!9.50e-10!17;UBERON:0000466!9.88e-10!79;UBERON:0004176!1.16e-09!17;UBERON:0009196!1.16e-09!17;UBERON:0009117!1.16e-09!17;UBERON:0003135!1.30e-09!15;UBERON:0000473!4.99e-09!14;UBERON:0000926!7.14e-09!193;UBERON:0004120!7.14e-09!193;UBERON:0006603!7.14e-09!193;UBERON:0002048!1.27e-08!14;UBERON:0000117!1.27e-08!14;UBERON:0000171!1.27e-08!14;UBERON:0000170!1.27e-08!14;UBERON:0005597!1.27e-08!14;UBERON:0000118!1.27e-08!14;UBERON:0001008!1.74e-08!17;UBERON:0005157!2.35e-08!27;UBERON:0006554!2.43e-08!16;UBERON:0005177!2.73e-08!85;UBERON:0002100!1.27e-07!98;UBERON:0002113!1.92e-07!14;UBERON:0003918!1.92e-07!14;UBERON:0005095!1.92e-07!14;UBERON:0007687!1.92e-07!14;UBERON:0005153!2.46e-07!17;UBERON:0003103!2.99e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.89e-17,14;UBERON:0000117,3.89e-17,14;UBERON:0000171,3.89e-17,14;UBERON:0000170,3.89e-17,14;UBERON:0005597,3.89e-17,14;UBERON:0000118,3.89e-17,14;UBERON:0005178,5.52e-16,17;UBERON:0005181,5.52e-16,17;UBERON:0002224,5.52e-16,17;UBERON:0000915,5.52e-16,17;UBERON:0008947,5.52e-16,17;UBERON:0003258,5.52e-16,17;UBERON:0003135,2.04e-14,15;UBERON:0009569,5.15e-14,66;UBERON:0005153,1.19e-13,17;UBERON:0003101,2.30e-13,16;UBERON:0000079,2.30e-13,16;UBERON:0000473,4.04e-13,14;UBERON:0003133,2.46e-11,24;UBERON:0005157,3.22e-11,20;UBERON:0002113,6.59e-11,14;UBERON:0003918,6.59e-11,14;UBERON:0011143,6.59e-11,14;UBERON:0005095,6.59e-11,14;UBERON:0007687,6.59e-11,14;UBERON:0005177,1.09e-10,79;UBERON:0004176,1.98e-10,17;UBERON:0009196,1.98e-10,17;UBERON:0009117,1.98e-10,17;UBERON:0005156,3.07e-10,26;UBERON:0000990,3.07e-10,26;UBERON:0000991,9.84e-10,18;UBERON:0005564,9.84e-10,18;UBERON:0002100,1.63e-09,90;UBERON:0006554,4.42e-08,18;UBERON:0001008,1.46e-07,19;UBERON:0001048,6.56e-07,134
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.74420125104357,0.439372365468944,3.11087838518853,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,1.7127581957859,0,0.593768556259299,0.520455980298408,0.304465478312141,0,0.301445281105245,2.11659672844269,1.63366568728578,0.494389935468748,1.01219549843938,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,1.83310854930569,1.36847667671102,1.0108910337347,0.420883711772948,0,0.229902104433473,0,0.60281927134286,0.884474488967262,0.768682321709099,0.843315521037559,2.84573707812917,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.536546802799238,0.233530684734339,0.822799249567402,0.656669856316381,2.10778904819225,2.48539978623065,1.97595103761946,0.671032093801859,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.610953983535943,2.71533482034676,2.94570443539338,8.47369597465048,14.9086249459398,13.0308944108341,9.25478729413504,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0.757736633841335,0,0.482443521363367,6.09685527549795,0,0.488894929326078,0,1.40814148973101,1.50755631697634,4.99891645860629,5.46374214001837,8.35466263762812,5.97954662051692,7.17546458958692,9.17634562408133,6.73471429276993,8.10034728056465,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0.656563598980245,0,0,0,0.82554747185289,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0.436725127492355,0,0.247960367176008,0,0,0,0,0.598066184175915,0.330916980914195,1.75006069509643,1.80823752868824,2.87225413334323,4.92900402312167,5.9894017028217,8.91304427618542,5.07326653734613,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,1.12609485270709,1.46521299413812,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.309873682371932,0,0,0,0.214871054048298,0,0,0
|short_description=p2@Col4a4
}}

Latest revision as of 16:10, 1 October 2015

Short description:p2@Col4a4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Col4a4_5end
Coexpression cluster:MCL_coexpression_mm9:305
Association with transcript: 12bp_to_ENSMUST00000135271_5end
EntrezGene:Col4a4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Col4a4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I114.91
kidney, neonate N25.CNhs11122.1353-25F313.03
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung3.89e-1714
respiratory tube3.89e-1714
respiration organ3.89e-1714
pair of lungs3.89e-1714
lung primordium3.89e-1714
lung bud3.89e-1714
thoracic cavity element5.52e-1617
thoracic segment organ5.52e-1617
thoracic cavity5.52e-1617
thoracic segment of trunk5.52e-1617
respiratory primordium5.52e-1617
endoderm of foregut5.52e-1617
male reproductive organ2.04e-1415
subdivision of trunk5.15e-1466
epithelial bud1.19e-1317
male organism2.30e-1316
male reproductive system2.30e-1316
testis4.04e-1314
reproductive organ2.46e-1124
epithelial fold3.22e-1120
kidney6.59e-1114
kidney mesenchyme6.59e-1114
upper urinary tract6.59e-1114
kidney rudiment6.59e-1114
kidney field6.59e-1114
trunk region element1.09e-1079
external genitalia1.98e-1017
indifferent external genitalia1.98e-1017
indifferent gonad1.98e-1017
reproductive structure3.07e-1026
reproductive system3.07e-1026
gonad9.84e-1018
gonad primordium9.84e-1018
trunk1.63e-0990
urinary system structure4.42e-0818
renal system1.46e-0719
primordium6.56e-07134
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