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FFCP PHASE1:Mm9::chr1:65003285..65003299,-: Difference between revisions

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{{FFCP|EntrezGene=241075|HGNC=|UniProt=|association_with_transcript=1bp_to_ENSMUST00000134097_5end|description=CAGE_peak_3_at_Plekhm3_5end|id=chr1:65003285..65003299,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.76e-15!102;UBERON:0000924!5.76e-15!102;UBERON:0006601!5.76e-15!102;UBERON:0000033!2.38e-14!63;UBERON:0002346!7.92e-14!71;UBERON:0003075!7.92e-14!71;UBERON:0007284!7.92e-14!71;UBERON:0000153!7.01e-12!94;UBERON:0003056!9.93e-12!49;UBERON:0007811!3.50e-10!86;UBERON:0000955!1.32e-09!50;UBERON:0006238!1.32e-09!50;UBERON:0002616!4.41e-09!49;UBERON:0001017!4.67e-09!73;UBERON:0005743!4.67e-09!73;UBERON:0000073!4.72e-09!75;UBERON:0001016!4.72e-09!75;UBERON:0001049!8.01e-09!52;UBERON:0005068!8.01e-09!52;UBERON:0006241!8.01e-09!52;UBERON:0007135!8.01e-09!52;UBERON:0003080!7.52e-08!40;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0002021!6.12e-07!10;UBERON:0000411!6.12e-07!10;UBERON:0001950!6.12e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.08e-15,95;UBERON:0000924,1.08e-15,95;UBERON:0006601,1.08e-15,95;UBERON:0002346,4.19e-15,64;UBERON:0003075,4.19e-15,64;UBERON:0007284,4.19e-15,64;UBERON:0010371,6.08e-15,73;UBERON:0003056,6.01e-14,49;UBERON:0010314,6.55e-12,92;UBERON:0002021,2.49e-11,10;UBERON:0000411,2.49e-11,10;UBERON:0001950,2.49e-11,10;UBERON:0000955,3.60e-11,47;UBERON:0006238,3.60e-11,47;UBERON:0002616,2.83e-10,46;UBERON:0000073,9.11e-10,54;UBERON:0001016,1.19e-09,75;UBERON:0001017,2.04e-09,73;UBERON:0001049,2.86e-09,52;UBERON:0005068,2.86e-09,52;UBERON:0006241,2.86e-09,52;UBERON:0007135,2.86e-09,52;UBERON:0000970,7.53e-09,9;UBERON:0000019,7.53e-09,9;UBERON:0000047,7.53e-09,9;UBERON:0010312,7.53e-09,9;UBERON:0004088,7.53e-09,9;UBERON:0002104,7.53e-09,9;UBERON:0001456,7.53e-09,9;UBERON:0003072,7.53e-09,9;UBERON:0004128,7.53e-09,9;UBERON:0003071,7.53e-09,9;UBERON:0001444,1.52e-08,11;UBERON:0003080,5.81e-08,40;UBERON:0002780,2.62e-07,39;UBERON:0001890,2.62e-07,39;UBERON:0006240,2.62e-07,39;UBERON:0000033,6.57e-07,13;UBERON:0002619,9.14e-07,17|phase1_expression=0.480446541314382,0.697950815278722,0,0.90739263392049,0,0,0.467225281191051,0.258246646883153,0,0.70219357896598,0,0,0,0.174840804837995,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0,0.765389611359628,0,0,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.51076181570693,0.506884656097573,0.550640256485045,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,0.503347818173209,0,1.34437519656986,1.02903774414379,0.286533439938757,1.03134418455488,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.725827286159344,0.135005938331691,0.841299845405528,0.285650984403804,0.662605622854841,0.122490799214954,0.766763768145891,0.919218786610021,0,1.78762273319263,1.99688493233117,0.791317726381163,0.640413505216868,0.52091337055676,0.837548997004143,1.12552522006336,2.44477196442896,0.883885756421003,0.284743361598206,0.559198337475902,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.845060518660083,0,0,0,0.865964164044856,0.506719730950197,0,0.11418387971906,1.8125651855302,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,1.50722640552623,1.41106448562846,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0.969750506270444,0,2.34224637609238,1.67557365450764,0.510914110417183,0.838705871541442,0,0.127070227073065,1.49790639404823,3.20250421973039,0.376963056338593,2.43354048269187,1.27857728665165,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0.758168275301024,1.05220927943237,1.43132487258974,0.689706313300419,2.34080768746954,1.35634336052144,2.72145996605311,3.45907044769094,3.09215691047105,1.81092359517311,1.72454394346274,0.567318240503458,0.703804496655795,0.876782929710299,0.556094498451196,1.39300866608867,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,0.852490498186778,1.03562886267751,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0,0.146199987425332,0.658650345873152,0.268412837520744,1.05144974282064,0.514523061896422,1.32167513193519,0,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,0.444756087689741,0,0,0,0,0.596869416123452,0,0,0,1.1948476395262,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.631222379012867,0.189709611372772,0.295220295959204,0.156998727841375,0.616985819609003,0.592905254174298,0.333690211432188,0,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0.554259570499814,0.378982823540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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241075
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000134097_5end
|cluster_id=chr1:65003285..65003299,-
|description=CAGE_peak_3_at_Plekhm3_5end
|id=chr1:65003285..65003299,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.76e-15!102;UBERON:0000924!5.76e-15!102;UBERON:0006601!5.76e-15!102;UBERON:0000033!2.38e-14!63;UBERON:0002346!7.92e-14!71;UBERON:0003075!7.92e-14!71;UBERON:0007284!7.92e-14!71;UBERON:0000153!7.01e-12!94;UBERON:0003056!9.93e-12!49;UBERON:0007811!3.50e-10!86;UBERON:0000955!1.32e-09!50;UBERON:0006238!1.32e-09!50;UBERON:0002616!4.41e-09!49;UBERON:0001017!4.67e-09!73;UBERON:0005743!4.67e-09!73;UBERON:0000073!4.72e-09!75;UBERON:0001016!4.72e-09!75;UBERON:0001049!8.01e-09!52;UBERON:0005068!8.01e-09!52;UBERON:0006241!8.01e-09!52;UBERON:0007135!8.01e-09!52;UBERON:0003080!7.52e-08!40;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0002021!6.12e-07!10;UBERON:0000411!6.12e-07!10;UBERON:0001950!6.12e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.08e-15,95;UBERON:0000924,1.08e-15,95;UBERON:0006601,1.08e-15,95;UBERON:0002346,4.19e-15,64;UBERON:0003075,4.19e-15,64;UBERON:0007284,4.19e-15,64;UBERON:0010371,6.08e-15,73;UBERON:0003056,6.01e-14,49;UBERON:0010314,6.55e-12,92;UBERON:0002021,2.49e-11,10;UBERON:0000411,2.49e-11,10;UBERON:0001950,2.49e-11,10;UBERON:0000955,3.60e-11,47;UBERON:0006238,3.60e-11,47;UBERON:0002616,2.83e-10,46;UBERON:0000073,9.11e-10,54;UBERON:0001016,1.19e-09,75;UBERON:0001017,2.04e-09,73;UBERON:0001049,2.86e-09,52;UBERON:0005068,2.86e-09,52;UBERON:0006241,2.86e-09,52;UBERON:0007135,2.86e-09,52;UBERON:0000970,7.53e-09,9;UBERON:0000019,7.53e-09,9;UBERON:0000047,7.53e-09,9;UBERON:0010312,7.53e-09,9;UBERON:0004088,7.53e-09,9;UBERON:0002104,7.53e-09,9;UBERON:0001456,7.53e-09,9;UBERON:0003072,7.53e-09,9;UBERON:0004128,7.53e-09,9;UBERON:0003071,7.53e-09,9;UBERON:0001444,1.52e-08,11;UBERON:0003080,5.81e-08,40;UBERON:0002780,2.62e-07,39;UBERON:0001890,2.62e-07,39;UBERON:0006240,2.62e-07,39;UBERON:0000033,6.57e-07,13;UBERON:0002619,9.14e-07,17
|phase1_expression=0.480446541314382,0.697950815278722,0,0.90739263392049,0,0,0.467225281191051,0.258246646883153,0,0.70219357896598,0,0,0,0.174840804837995,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0,0.765389611359628,0,0,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.51076181570693,0.506884656097573,0.550640256485045,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,0,0.503347818173209,0,1.34437519656986,1.02903774414379,0.286533439938757,1.03134418455488,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.725827286159344,0.135005938331691,0.841299845405528,0.285650984403804,0.662605622854841,0.122490799214954,0.766763768145891,0.919218786610021,0,1.78762273319263,1.99688493233117,0.791317726381163,0.640413505216868,0.52091337055676,0.837548997004143,1.12552522006336,2.44477196442896,0.883885756421003,0.284743361598206,0.559198337475902,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.845060518660083,0,0,0,0.865964164044856,0.506719730950197,0,0.11418387971906,1.8125651855302,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,1.50722640552623,1.41106448562846,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0.969750506270444,0,2.34224637609238,1.67557365450764,0.510914110417183,0.838705871541442,0,0.127070227073065,1.49790639404823,3.20250421973039,0.376963056338593,2.43354048269187,1.27857728665165,2.0778804455956,1.94689515681309,0.407357455401265,0.248813941220186,0.758168275301024,1.05220927943237,1.43132487258974,0.689706313300419,2.34080768746954,1.35634336052144,2.72145996605311,3.45907044769094,3.09215691047105,1.81092359517311,1.72454394346274,0.567318240503458,0.703804496655795,0.876782929710299,0.556094498451196,1.39300866608867,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,0.852490498186778,1.03562886267751,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0,0.146199987425332,0.658650345873152,0.268412837520744,1.05144974282064,0.514523061896422,1.32167513193519,0,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,0.444756087689741,0,0,0,0,0.596869416123452,0,0,0,1.1948476395262,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.631222379012867,0.189709611372772,0.295220295959204,0.156998727841375,0.616985819609003,0.592905254174298,0.333690211432188,0,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0.554259570499814,0.37898282354097,0,0.339490171550376,0.469380496577004,0.502518772325447,1.42826184531608,0.390267295715598,1.26108115284953,0.8858587585951,0.637819074629948,0.655453258862952,0.345369963731791,0.723245292907558,4.52373851817817,1.63171705145613,0,0.275936746304732,2.56880943980467,1.40654023910644,0.327869890753351,0.757412781613119,1.26203287766503,0,0.861693590931196,0.955875191810208,0.668396022247182,0.849229592366497,0,2.33804686329049,4.34816555741176,2.89189184779626,0.425820255624806,0.178065603667255,0.651547837414304,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,1.70219802876894,0.720244376125241,0.388076051348264,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,1.2178597964584,0.938686832254841,0.847328283455281,1.10264199027481,0.65954501176592,0.484393280087717,1.14594557363496,1.67121281604391,1.14898629821543,0.582961673259701,1.48340241608408,0.341741761595705,0.619160603889667,0.740778109478847,0,0.136694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,1.26534397432454,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0.388844919875379,1.24267862617385,0,0.897099276263873,1.65458490457098,0.583353565032143,1.16243841129958,0.844780627453891,0.704143431874524,0.911430693907651,2.41176492179135,2.41584120826006,0.864090018773596,0.948033361884535,1.21635129174099,0.821687657318618,1.42912905275575,0,0.993406773906324,0.721172697119813,0.886137163047463,0.605798699688886,0.914481679859998,0.201652370273681,0.194915761479505,0.577271049841977,0.350630706544707,0.906921534460845,0.665957860122194,0.538283139656854,0.671538465456314,0.772758376128762,0.563047426353546,0.183151624267265,0.428736758158132,0.501572104035363,3.3885110557024,1.84130094602871,1.71868654031819,1.89038500578056,3.42541259885321,0.755393897389701,5.40018000185445,2.70192721934532,1.81256963593682,3.10656187051092,0.518936737920883,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,1.11123363900808,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.89635213366817,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,0.735994600671987,0,0.532427418478012,1.43061713968393,0,0.376437521661322,0.676916863133412,0.914639864363863,0.789209134313529,0.950628796921032,0,0.355905054372522,0.0985044823755635,0,0.464810523557898,0.964533054905707,0.749431733813838,0.701794825336225,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p3@Plekhm3
}}

Latest revision as of 08:32, 27 September 2015

Short description:p3@Plekhm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Plekhm3_5end
Coexpression cluster:NA
Association with transcript: 1bp_to_ENSMUST00000134097_5end
EntrezGene:Plekhm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Plekhm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.08e-1595
ectoderm1.08e-1595
presumptive ectoderm1.08e-1595
neurectoderm4.19e-1564
neural plate4.19e-1564
presumptive neural plate4.19e-1564
ecto-epithelium6.08e-1573
pre-chordal neural plate6.01e-1449
structure with developmental contribution from neural crest6.55e-1292
occipital lobe2.49e-1110
visual cortex2.49e-1110
neocortex2.49e-1110
brain3.60e-1147
future brain3.60e-1147
regional part of brain2.83e-1046
regional part of nervous system9.11e-1054
nervous system1.19e-0975
central nervous system2.04e-0973
neural tube2.86e-0952
neural rod2.86e-0952
future spinal cord2.86e-0952
neural keel2.86e-0952
eye7.53e-099
camera-type eye7.53e-099
simple eye7.53e-099
immature eye7.53e-099
ocular region7.53e-099
visual system7.53e-099
face7.53e-099
optic cup7.53e-099
optic vesicle7.53e-099
eye primordium7.53e-099
subdivision of head1.52e-0811
anterior neural tube5.81e-0840
regional part of forebrain2.62e-0739
forebrain2.62e-0739
future forebrain2.62e-0739
head6.57e-0713
regional part of cerebral cortex9.14e-0717
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