FFCP PHASE1:Hg19::chr6:32632976..32632988,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4944 | |||
|TSSclassifier=strong | |||
|UniProt=A2VCT9 | |||
|association_with_transcript=-125bp_to_uc010juc.1_5end | |||
|cluster_id=chr6:32632976..32632988,- | |||
|description=CAGE_peak_10_at_HLA-DQB1_5end | |||
|id=chr6:32632976..32632988,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.31e-10;7!CL:0000586;9.31e-10;7!CL:0002535;4.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.52e-10,7;CL:0000586,9.52e-10,7;CL:0002535,4.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.32e-07;10!UBERON:0005564;4.32e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.55e-14;10!DOID:154;4.70e-09;2!DOID:4236;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.03e-14,10;DOID:154,5.08e-09,2;DOID:4236,5.08e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.20e-11!3;UBERON:0004854!2.20e-11!3;UBERON:0009034!2.20e-11!3;UBERON:0002095!2.20e-11!3;UBERON:0004782!2.20e-11!3;UBERON:0003281!2.20e-11!3;UBERON:0009664!2.20e-11!3;UBERON:0002296!2.20e-11!3;UBERON:0005602!2.20e-11!3;UBERON:0001179!2.20e-11!3;UBERON:0006293!2.20e-11!3;UBERON:0003135!3.62e-11!11;UBERON:0003127!5.88e-08!2;UBERON:0000473!2.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.02e-09;2!UBERON:0004801;4.02e-09;2!UBERON:0000473;1.19e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.02e-09,2;UBERON:0004801,4.02e-09,2;UBERON:0000473,1.22e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,4.86495122564762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0.284136146806413,0,0,0,0,0,0.333926115068718,2.63686198762815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,3.83060508953771,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.394028536495991,0.157363764404994,1.05600336519407,0,0,0,0,0,0,0,0,1.19730191562487,0,0,1.01980882368113,0,0,0,0,0,0,0.854299300541557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29326894192489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743614585554013,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,2.8665101273223,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1218771271618,0.26721740526556,4.59474497674225,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,1.0105859447911,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@HLA-DQB1 | |||
}} |
Latest revision as of 03:42, 18 September 2015
Short description: | p10@HLA-DQB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HLA-DQB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -125bp_to_uc010juc.1_5end |
EntrezGene: | HLA-DQB1 |
HGNC: | 4944 |
UniProt: | A2VCT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.52e-10 | 7 |
germ cell | 9.52e-10 | 7 |
epithelial cell of cervix | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.02e-09 | 2 |
cervix epithelium | 4.02e-09 | 2 |
testis | 1.22e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.03e-14 | 10 |
mixed cell type cancer | 5.08e-09 | 2 |
carcinosarcoma | 5.08e-09 | 2 |