FFCP PHASE1:Hg19::chr6:31795123..31795151,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:31795123..31795151,- | |||
|coexpression_cluster_id=C2784 | |||
|description=CAGE_peak_at_chr6:31795123..31795151,- | |||
|id=chr6:31795123..31795151,- | |||
|ontology_enrichment_celltype=CL:0002057!2.19e-12!42;CL:0000860!2.65e-12!45;CL:0000839!4.19e-12!70;CL:0000557!8.07e-11!71;CL:0000766!1.25e-09!76;CL:0002194!1.82e-09!63;CL:0000576!1.82e-09!63;CL:0000040!1.82e-09!63;CL:0000559!1.82e-09!63;CL:0002009!5.52e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.26e-17;5!CL:0000860;9.92e-13;33!CL:0002057;9.92e-13;33!CL:0000473;3.95e-10;39!CL:0000234;3.95e-10;39!CL:0000163;4.93e-10;9!CL:0000766;2.48e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.20e-17,5;CL:0002028,1.20e-17,5;CL:0000839,3.05e-12,66;CL:0000557,4.85e-12,67;CL:0000766,4.12e-11,72;CL:0000163,4.79e-10,9;CL:0000860,6.29e-10,42;CL:0002057,6.29e-10,42;CL:0000473,1.36e-08,48;CL:0000234,1.36e-08,48;CL:0000763,6.12e-07,108;CL:0000049,6.12e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-27!115;UBERON:0001049!3.24e-15!57;UBERON:0005068!3.24e-15!57;UBERON:0006241!3.24e-15!57;UBERON:0007135!3.24e-15!57;UBERON:0001017!3.00e-14!82;UBERON:0005743!3.76e-14!86;UBERON:0000955!1.16e-12!69;UBERON:0006238!1.16e-12!69;UBERON:0002616!5.87e-12!59;UBERON:0000073!6.29e-12!94;UBERON:0001016!6.29e-12!94;UBERON:0003080!1.54e-11!42;UBERON:0002780!1.53e-10!41;UBERON:0001890!1.53e-10!41;UBERON:0006240!1.53e-10!41;UBERON:0002346!4.52e-10!90;UBERON:0003075!5.15e-10!86;UBERON:0007284!5.15e-10!86;UBERON:0000153!9.82e-10!129;UBERON:0007811!9.82e-10!129;UBERON:0002371!8.53e-09!80;UBERON:0000033!1.53e-08!123;UBERON:0002298!2.27e-08!8;UBERON:0003056!4.93e-08!61;UBERON:0001893!5.84e-08!34;UBERON:0000062!8.25e-08!511;UBERON:0002405!9.07e-08!115;UBERON:0001474!1.06e-07!86;UBERON:0002390!1.98e-07!102;UBERON:0003061!1.98e-07!102;UBERON:0002791!3.03e-07!33;UBERON:0002020!4.76e-07!34;UBERON:0003528!4.76e-07!34;UBERON:0002193!9.84e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;9.83e-11;1!UBERON:0002038;1.37e-10;1!UBERON:0009661;1.37e-10;1!UBERON:0002950;1.37e-10;1!UBERON:0001891;1.37e-10;1!UBERON:0004177;4.53e-08;5!UBERON:0005057;4.53e-08;5!UBERON:0002298;7.30e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.57e-12,93;UBERON:0002390,2.33e-11,98;UBERON:0003061,2.33e-11,98;UBERON:0000996,9.84e-11,1;UBERON:0002038,1.57e-10,1;UBERON:0009661,1.57e-10,1;UBERON:0002950,1.57e-10,1;UBERON:0001891,1.57e-10,1;UBERON:0009616,1.57e-10,1;UBERON:0010286,1.57e-10,1;UBERON:0002371,1.87e-10,76;UBERON:0002193,3.89e-10,108;UBERON:0001474,1.37e-09,82;UBERON:0004765,1.30e-08,90;UBERON:0001434,1.31e-07,100;UBERON:0002298,5.93e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,2.47765096716083,0.863077176966451,1.5369642391746,1.18241114944293,0.689491361473237,3.22742341791913,4.06279459783025,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.852449501065388,0,0.56738522469114,0,1.25624332628372,0.521482918420201,2.6062661364614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,6.84182781284548,3.45887888200707,9.59442494040488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,2.65013777824443,0,1.3223260174269,0,0,0.854299300541557,0.78602152549833,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0.157054096250234,0,0,0.3755727921195,0.573409195690071,1.88579387612649,0.434674820589684,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,1.18818560130834,0,0,0,1.09578409555081,0,0,0,0,0,0.458729283404541,2.43677291357467,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.459474497674225,0,0,0,0,1.03432995861895,0.213233981900981,0,0,1.42771842880473,0,0.25458863311266,0,0.217716747896961,0,0.336760265072938,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0.813792356631477,3.32878387092756,0.402547587182052,0 | |||
|short_description=p@chr6:31795123..31795151,- | |||
}} |
Latest revision as of 00:11, 31 July 2015
Short description: | p@chr6:31795123..31795151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31795123..31795151, - |
Coexpression cluster: | C2784_Mast_vagina_CD14_liver_medulla_thalamus_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.20e-17 | 5 |
basophil mast progenitor cell | 1.20e-17 | 5 |
myeloid lineage restricted progenitor cell | 3.05e-12 | 66 |
granulocyte monocyte progenitor cell | 4.85e-12 | 67 |
myeloid leukocyte | 4.12e-11 | 72 |
endocrine cell | 4.79e-10 | 9 |
classical monocyte | 6.29e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.29e-10 | 42 |
defensive cell | 1.36e-08 | 48 |
phagocyte | 1.36e-08 | 48 |
myeloid cell | 6.12e-07 | 108 |
common myeloid progenitor | 6.12e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.57e-12 | 93 |
hematopoietic system | 2.33e-11 | 98 |
blood island | 2.33e-11 | 98 |
vagina | 9.84e-11 | 1 |
substantia nigra | 1.57e-10 | 1 |
midbrain nucleus | 1.57e-10 | 1 |
regional part of midbrain | 1.57e-10 | 1 |
midbrain | 1.57e-10 | 1 |
presumptive midbrain | 1.57e-10 | 1 |
midbrain neural tube | 1.57e-10 | 1 |
bone marrow | 1.87e-10 | 76 |
hemolymphoid system | 3.89e-10 | 108 |
bone element | 1.37e-09 | 82 |
skeletal element | 1.30e-08 | 90 |
skeletal system | 1.31e-07 | 100 |
brainstem | 5.93e-07 | 6 |