FFCP PHASE1:Mm9::chr1:193007430..193007475,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:193007430..193007475,+|id=chr1:193007430..193007475,+|ontology_enrichment_celltype=CL:0000063!9.94e-15!66;CL:0000144!8.14e-14!121;CL:0000012!8.14e-14!121;CL:0002563!2.01e-13!9;CL:0002251!2.01e-13!9;CL:0002371!1.75e-11!118;CL:0000075!1.44e-10!7;CL:0000034!5.90e-10!97;CL:0000239!7.85e-10!6;CL:0000677!7.85e-10!6;CL:0000212!7.85e-10!6;CL:0000584!7.85e-10!6;CL:0000548!2.01e-09!115;CL:0000004!2.01e-09!115;CL:0000255!2.01e-09!115;CL:0000988!8.52e-08!32;CL:0002032!8.52e-08!32;CL:0000037!8.52e-08!32;CL:0000566!8.52e-08!32;CL:0000837!8.52e-08!32;CL:0002320!1.02e-07!46;CL:0000134!1.02e-07!46;CL:0000066!2.63e-07!25;CL:0000219!3.85e-07!54;CL:0002076!3.98e-07!15;CL:0000723!4.08e-07!91;CL:0000048!4.08e-07!91|ontology_enrichment_celltype_v019_2=CL:0000239,5.03e-24,6;CL:0000677,5.03e-24,6;CL:0000584,5.03e-24,6;CL:0002563,1.78e-21,9;CL:0002251,1.78e-21,9;CL:0000075,1.55e-20,7;CL:0002076,1.39e-12,15;CL:0000223,3.75e-12,20;CL:0000066,1.67e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!5.65e-15!11;UBERON:0003350!2.01e-13!9;UBERON:0004808!2.01e-13!9;UBERON:0001277!2.01e-13!9;UBERON:0001242!1.44e-08!13;UBERON:0000060!1.44e-08!13;UBERON:0001262!1.44e-08!13;UBERON:0004786!1.44e-08!13;UBERON:0002384!1.02e-07!46;UBERON:0000344!3.98e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.78e-21,9;UBERON:0004808,1.78e-21,9;UBERON:0001277,1.78e-21,9;UBERON:0000485,1.95e-17,11;UBERON:0001242,1.23e-14,13;UBERON:0001262,1.23e-14,13;UBERON:0004786,1.23e-14,13;UBERON:0000344,1.39e-12,15;UBERON:0000490,2.86e-08,66;UBERON:0004923,1.46e-07,24;UBERON:0003929,3.07e-07,55|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,5.14189159221611,6.51164448930251,1.17515490338323,1.16806320297763,0.387369970324729,3.09735188733667,1.87251621057595,1.19852577757853,0.0797721589953364,0,0,0,0,0,0.630924330716475,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,1.5626706890476,1.57057123192139,23.5292595212406,3.41522742479223,0,0,0.101376931219515,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,6.37701875143691,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.889491589511453,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0.491764273019036,0,0.642202359951168,0,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,1.01987057996313,1.6794174278839,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr1:193007430..193007475,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:193007430..193007475,+ | |||
|description=CAGE_peak_at_chr1:193007430..193007475,+ | |||
|id=chr1:193007430..193007475,+ | |||
|ontology_enrichment_celltype=CL:0000063!9.94e-15!66;CL:0000144!8.14e-14!121;CL:0000012!8.14e-14!121;CL:0002563!2.01e-13!9;CL:0002251!2.01e-13!9;CL:0002371!1.75e-11!118;CL:0000075!1.44e-10!7;CL:0000034!5.90e-10!97;CL:0000239!7.85e-10!6;CL:0000677!7.85e-10!6;CL:0000212!7.85e-10!6;CL:0000584!7.85e-10!6;CL:0000548!2.01e-09!115;CL:0000004!2.01e-09!115;CL:0000255!2.01e-09!115;CL:0000988!8.52e-08!32;CL:0002032!8.52e-08!32;CL:0000037!8.52e-08!32;CL:0000566!8.52e-08!32;CL:0000837!8.52e-08!32;CL:0002320!1.02e-07!46;CL:0000134!1.02e-07!46;CL:0000066!2.63e-07!25;CL:0000219!3.85e-07!54;CL:0002076!3.98e-07!15;CL:0000723!4.08e-07!91;CL:0000048!4.08e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.03e-24,6;CL:0000677,5.03e-24,6;CL:0000584,5.03e-24,6;CL:0002563,1.78e-21,9;CL:0002251,1.78e-21,9;CL:0000075,1.55e-20,7;CL:0002076,1.39e-12,15;CL:0000223,3.75e-12,20;CL:0000066,1.67e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!5.65e-15!11;UBERON:0003350!2.01e-13!9;UBERON:0004808!2.01e-13!9;UBERON:0001277!2.01e-13!9;UBERON:0001242!1.44e-08!13;UBERON:0000060!1.44e-08!13;UBERON:0001262!1.44e-08!13;UBERON:0004786!1.44e-08!13;UBERON:0002384!1.02e-07!46;UBERON:0000344!3.98e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.78e-21,9;UBERON:0004808,1.78e-21,9;UBERON:0001277,1.78e-21,9;UBERON:0000485,1.95e-17,11;UBERON:0001242,1.23e-14,13;UBERON:0001262,1.23e-14,13;UBERON:0004786,1.23e-14,13;UBERON:0000344,1.39e-12,15;UBERON:0000490,2.86e-08,66;UBERON:0004923,1.46e-07,24;UBERON:0003929,3.07e-07,55 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,5.14189159221611,6.51164448930251,1.17515490338323,1.16806320297763,0.387369970324729,3.09735188733667,1.87251621057595,1.19852577757853,0.0797721589953364,0,0,0,0,0,0.630924330716475,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,1.5626706890476,1.57057123192139,23.5292595212406,3.41522742479223,0,0,0.101376931219515,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,6.37701875143691,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.889491589511453,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0.491764273019036,0,0.642202359951168,0,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,1.01987057996313,1.6794174278839,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:193007430..193007475,+ | |||
}} |
Latest revision as of 12:06, 5 August 2015
Short description: | p@chr1:193007430..193007475, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:193007430..193007475, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.03e-24 | 6 |
gut absorptive cell | 5.03e-24 | 6 |
enterocyte | 5.03e-24 | 6 |
intestinal epithelial cell | 1.78e-21 | 9 |
epithelial cell of alimentary canal | 1.78e-21 | 9 |
columnar/cuboidal epithelial cell | 1.55e-20 | 7 |
endo-epithelial cell | 1.39e-12 | 15 |
endodermal cell | 3.75e-12 | 20 |
epithelial cell | 1.67e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.78e-21 | 9 |
gastrointestinal system epithelium | 1.78e-21 | 9 |
intestinal epithelium | 1.78e-21 | 9 |
simple columnar epithelium | 1.95e-17 | 11 |
intestinal mucosa | 1.23e-14 | 13 |
wall of intestine | 1.23e-14 | 13 |
gastrointestinal system mucosa | 1.23e-14 | 13 |
mucosa | 1.39e-12 | 15 |
unilaminar epithelium | 2.86e-08 | 66 |
organ component layer | 1.46e-07 | 24 |
gut epithelium | 3.07e-07 | 55 |