FFCP PHASE1:Mm9::chr1:173319231..173319246,+: Difference between revisions
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{{FFCP|EntrezGene=226652|HGNC=|MCL_coexpression_id=3|UniProt=Q640N3,E9QMX7|association_with_transcript=140bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end|description=CAGE_peak_2_at_Arhgap30_5end|id=chr1:173319231..173319246,+|ontology_enrichment_celltype=CL:0000988!2.50e-08!32;CL:0002032!2.50e-08!32;CL:0000037!2.50e-08!32;CL:0000566!2.50e-08!32;CL:0000837!2.50e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,3.08e-13,32;CL:0002032,3.08e-13,32;CL:0000037,3.08e-13,32;CL:0000837,3.08e-13,32;CL:0000049,1.57e-10,19;CL:0002320,6.11e-10,46;CL:0000134,6.11e-10,46;CL:0002031,2.54e-09,25;CL:0000763,3.25e-08,16;CL:0000557,1.78e-07,7;CL:0000219,2.85e-07,54;CL:0000738,4.14e-07,17;CL:0002087,4.14e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.15e-15!48;UBERON:0002405!1.04e-14!70;UBERON:0002390!1.31e-13!45;UBERON:0003061!1.31e-13!45;UBERON:0001474!4.05e-10!22;UBERON:0004765!4.05e-10!22;UBERON:0001434!4.05e-10!22;UBERON:0002371!8.26e-10!16;UBERON:0002204!1.73e-08!32;UBERON:0003081!1.40e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.09e-23,48;UBERON:0002405,9.09e-23,48;UBERON:0002390,2.43e-20,45;UBERON:0003061,2.43e-20,45;UBERON:0001474,1.00e-14,22;UBERON:0004765,1.00e-14,22;UBERON:0001434,1.00e-14,22;UBERON:0002371,7.63e-14,16;UBERON:0002204,1.44e-13,32;UBERON:0003081,5.09e-11,87;UBERON:0002384,6.11e-10,46;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0000926,4.29e-08,120;UBERON:0004120,4.29e-08,120;UBERON:0006603,4.29e-08,120;UBERON:0000077,6.07e-07,35;UBERON:0002106,6.30e-07,6;UBERON:0004457,6.30e-07,6;UBERON:0000042,6.30e-07,6;UBERON:0004854,6.30e-07,6;UBERON:0009034,6.30e-07,6;UBERON:0002095,6.30e-07,6;UBERON:0004782,6.30e-07,6;UBERON:0003281,6.30e-07,6;UBERON:0009664,6.30e-07,6;UBERON:0002296,6.30e-07,6;UBERON:0005602,6.30e-07,6;UBERON:0001179,6.30e-07,6;UBERON:0006293,6.30e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.22808308603941,0.422366166455,0.936258105287974,0,0.0797721589953364,2.73921167889929,2.01066925563694,4.99664642723494,2.63217847606774,0.699561878128147,14.1957974411207,15.3568165638427,16.5511964201232,0.680346321208558,9.63122226648587,10.4479915655574,2.23989391910769,2.75291137280604,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,59.4314915646409,33.5974198145234,38.2172333100873,57.0584543390084,47.8131839470912,47.5800145970531,0,0,0,0,0,0,0,0,0,13.7581736967344,2.90144856804538,7.05796978199174,0,0.286533439938757,0.515672092277442,0,0,0,0,0,10.7987966073768,3.9554654502679,9.9467216092454,2.99600110518405,1.92109152660777,0,0.270011876663381,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0.860423876981386,0,0,0.649776417447669,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.79928715803342,10.0985774622397,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0,0.940709657085638,0,0,1.01219549843938,15.0383793831479,1.13236794963186,3.5334642953663,4.84875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,3.47463861067169,4.19931911695385,4.44745794755726,0.299581278809645,0,0,0.695297280769106,0.767146371990992,0.62336413367868,0.162241263067758,0.509196819251581,4.72746488318353,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,0,0,0.411564272815887,0,7.02213187313235,3.3455227924913,4.83077948972507,0,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.810688095458557,0.584799949701329,1.3173006917463,1.47627060636409,0.630869845692382,0.102904612379284,0,0,0,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,1.01430060694251,1.92941727801933,1.52775511068852,4.89083433666378,3.40483976227574,1.92192989231657,5.75072826109418,2.97712758134803,1.24815069245824,0.505157755894224,0.358794827043824,0,2.40179147216586,0.757965647081939,0.162964976442026,0,0,0.502518772325447,0,0.780534591431195,1.7339865851681,1.55025282754142,0.637819074629948,3.60499292374624,1.55416483679306,2.60368305446721,19.6028669121054,13.053736411649,0,0,0.481651769963376,0.468846746368813,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.659880491890142,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,1.29214146584111,0.363533729477506,0.7129947567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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226652 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q640N3,E9QMX7 | |||
|association_with_transcript=140bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end | |||
|cluster_id=chr1:173319231..173319246,+ | |||
|description=CAGE_peak_2_at_Arhgap30_5end | |||
|id=chr1:173319231..173319246,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.50e-08!32;CL:0002032!2.50e-08!32;CL:0000037!2.50e-08!32;CL:0000566!2.50e-08!32;CL:0000837!2.50e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.08e-13,32;CL:0002032,3.08e-13,32;CL:0000037,3.08e-13,32;CL:0000837,3.08e-13,32;CL:0000049,1.57e-10,19;CL:0002320,6.11e-10,46;CL:0000134,6.11e-10,46;CL:0002031,2.54e-09,25;CL:0000763,3.25e-08,16;CL:0000557,1.78e-07,7;CL:0000219,2.85e-07,54;CL:0000738,4.14e-07,17;CL:0002087,4.14e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.15e-15!48;UBERON:0002405!1.04e-14!70;UBERON:0002390!1.31e-13!45;UBERON:0003061!1.31e-13!45;UBERON:0001474!4.05e-10!22;UBERON:0004765!4.05e-10!22;UBERON:0001434!4.05e-10!22;UBERON:0002371!8.26e-10!16;UBERON:0002204!1.73e-08!32;UBERON:0003081!1.40e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.09e-23,48;UBERON:0002405,9.09e-23,48;UBERON:0002390,2.43e-20,45;UBERON:0003061,2.43e-20,45;UBERON:0001474,1.00e-14,22;UBERON:0004765,1.00e-14,22;UBERON:0001434,1.00e-14,22;UBERON:0002371,7.63e-14,16;UBERON:0002204,1.44e-13,32;UBERON:0003081,5.09e-11,87;UBERON:0002384,6.11e-10,46;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0000926,4.29e-08,120;UBERON:0004120,4.29e-08,120;UBERON:0006603,4.29e-08,120;UBERON:0000077,6.07e-07,35;UBERON:0002106,6.30e-07,6;UBERON:0004457,6.30e-07,6;UBERON:0000042,6.30e-07,6;UBERON:0004854,6.30e-07,6;UBERON:0009034,6.30e-07,6;UBERON:0002095,6.30e-07,6;UBERON:0004782,6.30e-07,6;UBERON:0003281,6.30e-07,6;UBERON:0009664,6.30e-07,6;UBERON:0002296,6.30e-07,6;UBERON:0005602,6.30e-07,6;UBERON:0001179,6.30e-07,6;UBERON:0006293,6.30e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.22808308603941,0.422366166455,0.936258105287974,0,0.0797721589953364,2.73921167889929,2.01066925563694,4.99664642723494,2.63217847606774,0.699561878128147,14.1957974411207,15.3568165638427,16.5511964201232,0.680346321208558,9.63122226648587,10.4479915655574,2.23989391910769,2.75291137280604,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,59.4314915646409,33.5974198145234,38.2172333100873,57.0584543390084,47.8131839470912,47.5800145970531,0,0,0,0,0,0,0,0,0,13.7581736967344,2.90144856804538,7.05796978199174,0,0.286533439938757,0.515672092277442,0,0,0,0,0,10.7987966073768,3.9554654502679,9.9467216092454,2.99600110518405,1.92109152660777,0,0.270011876663381,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0.860423876981386,0,0,0.649776417447669,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.79928715803342,10.0985774622397,1.92974780784272,0.173485326766136,0.608930956624282,0.461230994512117,0,0.940709657085638,0,0,1.01219549843938,15.0383793831479,1.13236794963186,3.5334642953663,4.84875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,3.47463861067169,4.19931911695385,4.44745794755726,0.299581278809645,0,0,0.695297280769106,0.767146371990992,0.62336413367868,0.162241263067758,0.509196819251581,4.72746488318353,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,0,0,0.411564272815887,0,7.02213187313235,3.3455227924913,4.83077948972507,0,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.810688095458557,0.584799949701329,1.3173006917463,1.47627060636409,0.630869845692382,0.102904612379284,0,0,0,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,1.01430060694251,1.92941727801933,1.52775511068852,4.89083433666378,3.40483976227574,1.92192989231657,5.75072826109418,2.97712758134803,1.24815069245824,0.505157755894224,0.358794827043824,0,2.40179147216586,0.757965647081939,0.162964976442026,0,0,0.502518772325447,0,0.780534591431195,1.7339865851681,1.55025282754142,0.637819074629948,3.60499292374624,1.55416483679306,2.60368305446721,19.6028669121054,13.053736411649,0,0,0.481651769963376,0.468846746368813,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.659880491890142,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,1.29214146584111,0.363533729477506,0.712994756769443,1.26414703174326,0,1.03135543248187,0,0,0.258717367565509,0,0.177340233642274,0.356737635204141,0,0,0.469343416127421,0,0.661585194164886,0.98931751764888,0.968786560175433,0.844380948994182,0.358117032009409,0.164140899745061,0.874442509889552,0.556275906031529,8.37267315909478,3.92135049130123,6.48180845793991,4.70921142511728,6.15124024744613,5.26189798375002,2.37969801991397,4.05859211738608,3.86959926652387,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.826534557253359,0,0.648074866458964,0,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0.209718688851422,0.241584120826006,0,2.8441000856536,1.82452693761148,1.64337531463724,1.29920822977795,1.25318686967237,1.19208812868759,1.68273629327956,1.32920574457119,1.31256384932592,1.905170166375,0.806609481094724,1.55932609183604,1.34696578296461,1.8700304349051,0,0,0,0,0.386379188064381,1.87682475451182,0.73260649706906,1.50057865355346,0,0.564751842617067,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0.888986911206461,1.23621034343337,0.962757628775446,0.252697211763798,0.25347929989024,1.13175804831646,0.37456602987953,0.512201219238954,0.574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,0.953744759789284,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.689531376628944,1.22769312950907,0.929621047115796,0.192906610981141,0.249810577937946,1.16965804222704,0.644613162144895,1.72159498861959,1.54413993383661,1.62307484934295 | |||
|short_description=p2@Arhgap30 | |||
}} |
Latest revision as of 18:59, 26 September 2015
Short description: | p2@Arhgap30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap30_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 140bp_to_ENSMUST00000111282, NM_001005508, uc007doh.2, uc007doi.2_5end |
EntrezGene: | Arhgap30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.08e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.08e-13 | 32 |
hematopoietic stem cell | 3.08e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.08e-13 | 32 |
common myeloid progenitor | 1.57e-10 | 19 |
connective tissue cell | 6.11e-10 | 46 |
mesenchymal cell | 6.11e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 2.54e-09 | 25 |
myeloid cell | 3.25e-08 | 16 |
granulocyte monocyte progenitor cell | 1.78e-07 | 7 |
motile cell | 2.85e-07 | 54 |
leukocyte | 4.14e-07 | 17 |
nongranular leukocyte | 4.14e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.09e-23 | 48 |
immune system | 9.09e-23 | 48 |
hematopoietic system | 2.43e-20 | 45 |
blood island | 2.43e-20 | 45 |
bone element | 1.00e-14 | 22 |
skeletal element | 1.00e-14 | 22 |
skeletal system | 1.00e-14 | 22 |
bone marrow | 7.63e-14 | 16 |
musculoskeletal system | 1.44e-13 | 32 |
lateral plate mesoderm | 5.09e-11 | 87 |
connective tissue | 6.11e-10 | 46 |
hemopoietic organ | 1.22e-08 | 29 |
immune organ | 1.22e-08 | 29 |
mesoderm | 4.29e-08 | 120 |
mesoderm-derived structure | 4.29e-08 | 120 |
presumptive mesoderm | 4.29e-08 | 120 |
mixed endoderm/mesoderm-derived structure | 6.07e-07 | 35 |
spleen | 6.30e-07 | 6 |
cavity lining | 6.30e-07 | 6 |
serous membrane | 6.30e-07 | 6 |
gastrointestinal system mesentery | 6.30e-07 | 6 |
stomach region | 6.30e-07 | 6 |
mesentery | 6.30e-07 | 6 |
gastrointestinal system serosa | 6.30e-07 | 6 |
mesentery of stomach | 6.30e-07 | 6 |
gut mesentery | 6.30e-07 | 6 |
dorsal mesentery | 6.30e-07 | 6 |
dorsal mesogastrium | 6.30e-07 | 6 |
peritoneal cavity | 6.30e-07 | 6 |
spleen primordium | 6.30e-07 | 6 |