FFCP PHASE1:Hg19::chr6:2245797..2245848,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2762 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4369 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003mtq.2_5end | |||
|cluster_id=chr6:2245797..2245848,- | |||
|description=CAGE_peak_1_at_GMDS_5end | |||
|id=chr6:2245797..2245848,- | |||
|ontology_enrichment_celltype=CL:0000066!1.27e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.16e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.80e-08!155;UBERON:0001555!3.80e-08!155;UBERON:0007026!3.80e-08!155;UBERON:0004119!4.24e-08!169;UBERON:0000925!4.24e-08!169;UBERON:0006595!4.24e-08!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.11e-10,160;UBERON:0000925,4.11e-10,160;UBERON:0006595,4.11e-10,160;UBERON:0001007,5.74e-10,145;UBERON:0001555,5.74e-10,145;UBERON:0007026,5.74e-10,145;UBERON:0001041,2.87e-08,87;UBERON:0004921,3.34e-08,118;UBERON:0001004,8.78e-07,74 | |||
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| |||
|short_description=p1@GMDS | |||
}} |
Latest revision as of 05:07, 17 September 2015
Short description: | p1@GMDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003mtq.2_5end |
EntrezGene: | GMDS |
HGNC: | 4369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.16e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.11e-10 | 160 |
endoderm | 4.11e-10 | 160 |
presumptive endoderm | 4.11e-10 | 160 |
digestive system | 5.74e-10 | 145 |
digestive tract | 5.74e-10 | 145 |
primitive gut | 5.74e-10 | 145 |
foregut | 2.87e-08 | 87 |
subdivision of digestive tract | 3.34e-08 | 118 |
respiratory system | 8.78e-07 | 74 |